BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0495.0006.p (183 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3K8F3.1 B3K8F3_9BACI Putative uncharacterized protein 305 1e-81 C3KWR7.1 C3KWR7_CLOB6 Putative uncharacterized protein 175 2e-42 B1QQ84.1 B1QQ84_CLOBO Putative uncharacterized protein 175 2e-42 B1ILT5.1 B1ILT5_CLOBK Putative uncharacterized protein 175 2e-42 B1KS52.1 B1KS52_CLOBM Putative uncharacterized protein 174 2e-42 >B3K8F3.1 B3K8F3_9BACI Putative uncharacterized protein Length = 178 Score = 305 bits (780), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 142/181 (78%), Positives = 163/181 (90%), Gaps = 3/181 (1%) Query: 1 MEADHSVFILLTNTGTLFTKLIQGYTKAPYNHASIAFDRELKELYSFGRKNPSNPLNGGF 60 M D SVFILLTNTGTLFTK+IQGYT+APYNHASI+F+REL ELYSFGRKNP+NPLNGGF Sbjct: 1 MVDDQSVFILLTNTGTLFTKVIQGYTRAPYNHASISFNRELSELYSFGRKNPNNPLNGGF 60 Query: 61 VHEDLRTGTFSKYPDTTCVIYELHVSEREVEKMRRVLXXXXVFIRSRQKYLYNMLGVIGI 120 V EDL+TGTFSKYP+TTCVIYEL VSER++ KM+RVL FIR +KY YN+LGV+GI Sbjct: 61 VKEDLKTGTFSKYPNTTCVIYELQVSERDIAKMKRVL---QAFIRKDKKYFYNILGVLGI 117 Query: 121 ALKEPVEFSNSYFCSQFVAEILDRSGIKLWNKLPALVTPDDFRQSDRLELIYQGKLREYA 180 ALKEP+EFSNSYFCSQFVAEIL RSG++LW+KLPALVTPDDFRQS+RL+LIY+G+L EY Sbjct: 118 ALKEPIEFSNSYFCSQFVAEILQRSGVRLWDKLPALVTPDDFRQSERLQLIYEGRLSEYE 177 Query: 181 P 181 P Sbjct: 178 P 178 >C3KWR7.1 C3KWR7_CLOB6 Putative uncharacterized protein Length = 183 Score = 175 bits (444), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 83/180 (46%), Positives = 118/180 (65%), Gaps = 3/180 (1%) Query: 1 MEADHSVFILLTNTGTLFTKLIQGYTKAPYNHASIAFDRELKELYSFGRKNPSNPLNGGF 60 ME ++I+L+ TG+ F LI+ YTK PY+H S+AFD+ELKE+YSFGRK P+NP GF Sbjct: 1 MEKYKQIYIVLSLTGSNFGHLIKFYTKEPYSHVSLAFDKELKEMYSFGRKYPNNPFIAGF 60 Query: 61 VHEDLRTGTFSKYPDTTCVIYELHVSEREVEKMRRVLXXXXVFIRSRQKYLYNMLGVIGI 120 V E L G F K+ + C IY L ++E + K++ ++ F KY YN+LG++G+ Sbjct: 61 VKESLDKGAFLKFKNAECTIYSLDITEDKYYKLKEIIEN---FKEESDKYSYNLLGILGV 117 Query: 121 ALKEPVEFSNSYFCSQFVAEILDRSGIKLWNKLPALVTPDDFRQSDRLELIYQGKLREYA 180 + P+E YFCSQFV+ +L +SG++L+NK P L TP DFR + ++IY GKL EY Sbjct: 118 IIGYPLETKYKYFCSQFVSHVLIKSGVQLFNKPPGLTTPQDFRIYENKKVIYSGKLNEYT 177 >B1QQ84.1 B1QQ84_CLOBO Putative uncharacterized protein Length = 183 Score = 175 bits (444), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 83/180 (46%), Positives = 118/180 (65%), Gaps = 3/180 (1%) Query: 1 MEADHSVFILLTNTGTLFTKLIQGYTKAPYNHASIAFDRELKELYSFGRKNPSNPLNGGF 60 ME ++I+L+ TG+ F LI+ YTK PY+H S+AFD+ELKE+YSFGRK P+NP GF Sbjct: 1 MEKYKQIYIVLSLTGSNFGHLIKFYTKEPYSHVSLAFDKELKEMYSFGRKYPNNPFIAGF 60 Query: 61 VHEDLRTGTFSKYPDTTCVIYELHVSEREVEKMRRVLXXXXVFIRSRQKYLYNMLGVIGI 120 V E L G F K+ + C IY L ++E + K++ ++ F KY YN+LG++G+ Sbjct: 61 VKESLDKGAFLKFKNAECTIYSLDITEDKYYKLKEIIEN---FKEESDKYSYNLLGILGV 117 Query: 121 ALKEPVEFSNSYFCSQFVAEILDRSGIKLWNKLPALVTPDDFRQSDRLELIYQGKLREYA 180 + P+E YFCSQFV+ +L +SG++L+NK P L TP DFR + ++IY GKL EY Sbjct: 118 IIGYPLETKYKYFCSQFVSHVLIKSGVQLFNKPPGLTTPQDFRIYENKKVIYSGKLNEYT 177 >B1ILT5.1 B1ILT5_CLOBK Putative uncharacterized protein Length = 183 Score = 175 bits (443), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 83/180 (46%), Positives = 117/180 (65%), Gaps = 3/180 (1%) Query: 1 MEADHSVFILLTNTGTLFTKLIQGYTKAPYNHASIAFDRELKELYSFGRKNPSNPLNGGF 60 ME ++I+L+ TG+ F LI+ YTK PY+H S+AFD+ELKE+YSFGRK P+NP GF Sbjct: 1 MEKYKQIYIVLSLTGSNFGHLIKFYTKEPYSHVSLAFDKELKEMYSFGRKYPNNPFIAGF 60 Query: 61 VHEDLRTGTFSKYPDTTCVIYELHVSEREVEKMRRVLXXXXVFIRSRQKYLYNMLGVIGI 120 V E L G F K+ + C IY L ++E + K++ ++ F KY YN+LG++G+ Sbjct: 61 VKESLDKGAFLKFKNAECTIYSLDITEDKYYKLKEIIEN---FKEESDKYSYNLLGILGV 117 Query: 121 ALKEPVEFSNSYFCSQFVAEILDRSGIKLWNKLPALVTPDDFRQSDRLELIYQGKLREYA 180 + P+E YFCSQFV+ +L +SG++L+NK P L TP DFR + +IY GKL EY Sbjct: 118 IIGYPLETKYKYFCSQFVSHVLIKSGVQLFNKPPGLTTPQDFRIYENKRIIYSGKLNEYT 177 >B1KS52.1 B1KS52_CLOBM Putative uncharacterized protein Length = 183 Score = 174 bits (442), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 83/180 (46%), Positives = 117/180 (65%), Gaps = 3/180 (1%) Query: 1 MEADHSVFILLTNTGTLFTKLIQGYTKAPYNHASIAFDRELKELYSFGRKNPSNPLNGGF 60 ME ++I+L+ TG+ F LI+ YTK PY+H S+AFD+ELKE+YSFGRK P+NP GF Sbjct: 1 MEKYKQIYIVLSLTGSNFGHLIKFYTKEPYSHVSLAFDKELKEMYSFGRKYPNNPFIAGF 60 Query: 61 VHEDLRTGTFSKYPDTTCVIYELHVSEREVEKMRRVLXXXXVFIRSRQKYLYNMLGVIGI 120 V E L G F K+ + C IY L ++E + K++ ++ F KY YN+LG++G+ Sbjct: 61 VKESLDKGAFLKFKNAECTIYSLDITEDKYYKLKEIIEN---FKEESDKYSYNLLGILGV 117 Query: 121 ALKEPVEFSNSYFCSQFVAEILDRSGIKLWNKLPALVTPDDFRQSDRLELIYQGKLREYA 180 + P+E YFCSQFV+ +L +SG++L+NK P L TP DFR + +IY GKL EY Sbjct: 118 IVGYPLETKYKYFCSQFVSHVLIKSGVQLFNKPPGLTTPQDFRIYENKRIIYSGKLNEYT 177 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.322 0.139 0.409 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,109,514,491 Number of extensions: 43824951 Number of successful extensions: 75248 Number of sequences better than 1.0e-05: 47 Number of HSP's gapped: 75197 Number of HSP's successfully gapped: 47 Length of query: 183 Length of database: 3,060,696,203 Length adjustment: 127 Effective length of query: 56 Effective length of database: 1,864,227,298 Effective search space: 104396728688 Effective search space used: 104396728688 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 127 (53.5 bits)