BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0494.0006.p (635 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C3BTZ9.1 C3BTZ9_9BACI Putative uncharacterized protein 972 0.0 C2XM52.1 C2XM52_BACCE Putative uncharacterized protein 890 0.0 Q9KFY2.1 Q9KFY2_BACHD BH0338 protein 819 0.0 Q5WBY2.1 Q5WBY2_BACSK Putative uncharacterized protein 813 0.0 B1YHA4.1 B1YHA4_EXIS2 CRISPR-associated protein, Csd1 family 666 0.0 >C3BTZ9.1 C3BTZ9_9BACI Putative uncharacterized protein Length = 637 Score = 973 bits (2514), Expect = 0.0, Method: Compositional matrix adjust. Identities = 461/635 (72%), Positives = 543/635 (85%), Gaps = 6/635 (0%) Query: 1 MSWLLNLYETYQSNQDCVGVIETRYNDREYTLLPVSHTTQNAHIEVNVTEDGEFHSASVL 60 MSWLLNLYETYQSN D VG IE +YN +EYTLLP+SHTTQ AHIEV++TEDGEFH+A ++ Sbjct: 1 MSWLLNLYETYQSNLDRVGKIEKKYNGQEYTLLPISHTTQTAHIEVSITEDGEFHTAEII 60 Query: 61 DKSESSTLIPCTEDSASRAGSKVAPYPLHDKLSYVAGDFLAYGGKIKKEEPFAAYIKQLG 120 DKS++STLIPCTE+SA+RAGSK+APYPLHDKLSYVAGDF+ YGGKIKKEEPF+ YI QL Sbjct: 61 DKSDASTLIPCTENSANRAGSKIAPYPLHDKLSYVAGDFVTYGGKIKKEEPFSYYINQLE 120 Query: 121 GWADSPYACPKVKSIHSYLSKRRLIQDLVSHSILFLDADHQLIEKWDKKYEALHGEKPLI 180 GW SPYA KVKSI++YLSKRRLI+DLV IL +D + +LIE WDKK EA GEKP I Sbjct: 121 GWTVSPYATAKVKSIYTYLSKRRLIKDLVEKGILHVDTNGELIEAWDKKAEAFLGEKPPI 180 Query: 181 FSAVAGEQESAFIRFNVYSPDKELTKVWKDPEMYDSFMQYYSHLLGQEDYCYVTGRMLPS 240 FS V G QESAF+RFNVYSP+K LTKVWKDPEMYDSF+++YS+ LG++DYCYVTG+++PS Sbjct: 181 FSVVTGNQESAFVRFNVYSPNKMLTKVWKDPEMYDSFIKFYSNFLGKDDYCYVTGKIMPS 240 Query: 241 TDRHANKIRNAADKAKLISSNDTSGFTFRGRFTQSSDAASISYEVSQKAHNALKWLINRQ 300 TD+HANKIRNA DKAKLIS+NDTSGFTFRGRF +++D A+ISY+VSQKAHNALKWLIN+Q Sbjct: 241 TDKHANKIRNAGDKAKLISANDTSGFTFRGRFHKANDVANISYDVSQKAHNALKWLINKQ 300 Query: 301 GKIVDQRVFLVWGNDDLNIPDPTED---FFSFDLEPAVARERKSYTHKEYAGEIAKAMDG 357 GKIVDQRVFLVWGND +IPD ED +S DL RE KSYTH+++A E+AKA+DG Sbjct: 301 GKIVDQRVFLVWGNDSEDIPDFVEDSYNIYSMDLRLPKKREIKSYTHEQFADEVAKAIDG 360 Query: 358 YRNKLASEYKSDVNILVLDSATTGRLAVLYYRNMDKQLYLDKLVHWHSTCSWLHRYRKNT 417 Y+N L+S ++VNIL+LDSATTGRLAVLYYRNMDK LYL++L +WHSTC W HRYRKN Sbjct: 361 YKNNLSSS--ANVNILLLDSATTGRLAVLYYRNMDKNLYLNRLKNWHSTCVWEHRYRKNK 418 Query: 418 QDEWVEFYGASATKDIAFAAYGPKANEKIVKGVMERLLPCIVDGHNIPQDIVRSAFYRAS 477 +E+V+FYGA +TKDIAFAAYGPKANEKIVKG+MER+LPCI+D IP DIVRSA RAS Sbjct: 419 DNEFVKFYGAPSTKDIAFAAYGPKANEKIVKGLMERILPCIIDEKKIPFDIVRSAIQRAS 478 Query: 478 NPVSMEKWEWEKTLSITCALINAKEEMNVALDTEIDDRSYLFGRLLAIADVLERRALDSD 537 NPVSME+WEWEKTLSITCALIN E + LD E +DR YLFGRLLAIADVLER++L++ Sbjct: 479 NPVSMERWEWEKTLSITCALINTMEGYQMVLDKENNDRDYLFGRLLAIADVLERKSLNTS 538 Query: 538 EKRSTNAIRYMNAFSQHPERTWNTIQQSIQPHQARLGTKLRYYSSLIDEVASKIPLDQFN 597 ++R+TNA RYMN+FSQHPERTW TIQ ++QP+QARLG K+ YY+ LIDEV SKI + FN Sbjct: 539 DQRATNARRYMNSFSQHPERTWRTIQGALQPYQARLGEKVSYYNKLIDEVGSKIKIGDFN 598 Query: 598 NKPLSGKYLLGFYSQRHELYQKKDKNNDSIQASEN 632 NKPLSG+YLLGFYSQRHELYQKK+ NN S+ S N Sbjct: 599 NKPLSGRYLLGFYSQRHELYQKKE-NNVSLDESVN 632 >C2XM52.1 C2XM52_BACCE Putative uncharacterized protein Length = 639 Score = 890 bits (2301), Expect = 0.0, Method: Compositional matrix adjust. Identities = 422/639 (66%), Positives = 518/639 (81%), Gaps = 10/639 (1%) Query: 1 MSWLLNLYETYQSNQDCVGVIETRYNDREYTLLPVSHTTQNAHIEVNVTEDGEFHSASVL 60 MSW+LNLYETYQSN D VG IE +YN +EYTLLP+SHTTQ+A+IEV +TE+GEFHSA+V+ Sbjct: 1 MSWILNLYETYQSNLDRVGKIEKKYNGQEYTLLPISHTTQSANIEVLITEEGEFHSATVI 60 Query: 61 DKSESSTLIPCTEDSASRAGSKV--APYPLHDKLSYVAGDFLAYGGKIKKEEPFAAYIKQ 118 DKS+++TLIPCTEDSASR+G+ P+PLHDKL+YVAGDF YGG K+EE F YI+Q Sbjct: 61 DKSDANTLIPCTEDSASRSGTGAYKVPHPLHDKLTYVAGDFGEYGGSKKEEESFGYYIEQ 120 Query: 119 LGGWADSPYACPKVKSIHSYLSKRRLIQDLVSHSILFLDADHQLIEKWDKKYEALHGEKP 178 W +SPY K+KSI+ YL K++L++DLV IL+LD + +LI KWDKK E G KP Sbjct: 121 QRNWVESPYTTDKLKSIYKYLRKKQLVKDLVETKILWLDENQKLIGKWDKKVEVFLGNKP 180 Query: 179 LIFSAVAGEQESAFIRFNVYSPDKELTKVWKDPEMYDSFMQYYSHLLGQEDYCYVTGRML 238 IF+ + QE+AF+RF VYSP+K L+KVW+D E+++SF+ +Y LL EDYCYVTG + Sbjct: 181 EIFTVLPAGQEAAFVRFTVYSPNKMLSKVWQDKEIHNSFINFYDGLLDNEDYCYVTGEIK 240 Query: 239 PSTDRHANKIRNAADKAKLISSNDTSGFTFRGRFTQSSDAASISYEVSQKAHNALKWLIN 298 PSTD+HA KIRNA+D+AKLISSND GFTFRGRFT S++ A+ISY+VSQKAHNALKWLIN Sbjct: 241 PSTDKHAKKIRNASDQAKLISSNDLRGFTFRGRFTTSNEVANISYDVSQKAHNALKWLIN 300 Query: 299 RQGKIVDQRVFLVWGNDDLNIPDPTED---FFSFDLEPAVARERKSYTHKEYAGEIAKAM 355 +QGKI+DQRVFLVWGND ++PD ED FS D+ RE KSYTH+++A E+AKA+ Sbjct: 301 KQGKIIDQRVFLVWGNDAEDVPDIVEDSYNIFSMDIRGTKKREIKSYTHEQFANEVAKAI 360 Query: 356 DGYRNKLASEYKSDVNILVLDSATTGRLAVLYYRNMDKQLYLDKLVHWHSTCSWLHRYRK 415 DGY+N L+S +VNIL+LDSATTGRLAVLYYRNMDK LYL+KL WHSTC W H YRK Sbjct: 361 DGYKNNLSSS--ENVNILLLDSATTGRLAVLYYRNMDKNLYLNKLKKWHSTCVWEHGYRK 418 Query: 416 NTQDEWVEFYGASATKDIAFAAYGPKANEKIVKGVMERLLPCIVDGHNIPQDIVRSAFYR 475 N +E+V+FYGA +T+DIAFAAYGPK NEK+VK +MER+LPCI+D IP DIVRSAF R Sbjct: 419 NADNEFVKFYGAPSTRDIAFAAYGPKVNEKVVKSLMERMLPCIIDERKIPFDIVRSAFQR 478 Query: 476 ASNPVSMEKWEWEKTLSITCALINAKEEMNVALDTEIDDRSYLFGRLLAIADVLERRALD 535 ASNP+SMEKWEWEKTLSITCALIN E + LD E ++R YLFGRLLA+ADVLER+AL+ Sbjct: 479 ASNPLSMEKWEWEKTLSITCALINTMEGYQLVLDKENNNRDYLFGRLLAVADVLERKALN 538 Query: 536 SDEKRSTNAIRYMNAFSQHPERTWNTIQQSIQPHQARLGTKLRYYSSLIDEVASKIPLDQ 595 + ++R+TNA RYMN+FSQHPERTW TIQ ++QP+QARLG K+ YY+ LIDE+ S I ++ Sbjct: 539 NGDQRATNARRYMNSFSQHPERTWRTIQGALQPYQARLGEKVWYYNKLIDEIGSMIKIED 598 Query: 596 FNNKPLSGKYLLGFYSQRHELYQKKDKN---NDSIQASE 631 FNNKPLSGKYLLGFYSQRHELYQKK+KN ND++ E Sbjct: 599 FNNKPLSGKYLLGFYSQRHELYQKKEKNVSLNDAVNIGE 637 >Q9KFY2.1 Q9KFY2_BACHD BH0338 protein Length = 627 Score = 819 bits (2116), Expect = 0.0, Method: Compositional matrix adjust. Identities = 400/632 (63%), Positives = 492/632 (77%), Gaps = 13/632 (2%) Query: 1 MSWLLNLYETYQSNQDCVGVIETRYNDREYTLLPVSHTTQNAHIEVNVTEDGEFHSASVL 60 MSWLL+LYETY++N D VG + DREYTLLP+SHTTQNAHIEV + EDG+F A L Sbjct: 1 MSWLLHLYETYEANLDQVGKTVKKGEDREYTLLPISHTTQNAHIEVTLDEDGDFLRAKAL 60 Query: 61 DKSESSTLIPCTEDSASRAGSKVAPYPLHDKLSYVAGDFLAYGGKIKKEE--PFAAYIKQ 118 K STLIPCTE++ASR+GSKVAPYPLHDKLSYVAGDF+ YGGKIK ++ PF YIK Sbjct: 61 TKE--STLIPCTEEAASRSGSKVAPYPLHDKLSYVAGDFVKYGGKIKNQDDAPFDTYIKN 118 Query: 119 LGGWADSPYACPKVKSIHSYLSKRRLIQDLVSHSILFLDADHQLIEKWDKKYEALHGEKP 178 LG WA+SPYA KVK I++YL K RLI+DLV +L LD + QLIEKW+K+YE L GEKP Sbjct: 119 LGEWANSPYATEKVKCIYTYLKKGRLIEDLVDAGVLKLDENQQLIEKWEKRYEELLGEKP 178 Query: 179 LIFSAVAGEQESAFIRFNVYSPDKELTKVWKDPEMYDSFMQYYSHLLGQEDYCYVTGRML 238 IFS+ A +Q SAF+RFNV+ P+ + VWKD EM+DSF+ +Y+ LG+ED C+VTG L Sbjct: 179 AIFSSGATDQASAFVRFNVFHPES-IDDVWKDKEMFDSFISFYNDKLGEEDICFVTGNRL 237 Query: 239 PSTDRHANKIRNAADKAKLISSNDTSGFTFRGRFTQSSDAASISYEVSQKAHNALKWLIN 298 PST+RHANKIR+AADKAKLIS+ND SGFTFRGRF S +A ISYEVSQKAHNALKWLI+ Sbjct: 238 PSTERHANKIRHAADKAKLISANDNSGFTFRGRFKTSREAVGISYEVSQKAHNALKWLIH 297 Query: 299 RQGKIVDQRVFLVWGNDDLNIPDPTEDFFSFDLEPAVARERKSYTHKEYAGEIAKAMDGY 358 RQ K +D RVFLVW ND+ +P+P ED ER T + +AGE+ KA+ GY Sbjct: 298 RQSKSIDDRVFLVWSNDNSLVPNPDEDAVDIMKHANRELERDPDTGQIFAGEVKKAIGGY 357 Query: 359 RNKLASEYKSDVNILVLDSATTGRLAVLYYRNMDKQLYLDKLVHWHSTCSWLHRYRKNTQ 418 R+ L Y+ +V+ILVLDSATTGR+AVLYYR+++K+LYL++L WH +C+W HRYR++ + Sbjct: 358 RSDL--NYQPEVHILVLDSATTGRMAVLYYRSLNKELYLNRLEAWHDSCAWEHRYRRD-E 414 Query: 419 DEWVEFYGASATKDIAFAAYGPKANEKIVKGVMERLLPCIVDGHNIPQDIVRSAFYRASN 478 E++ FYGA ATKDIAFAAYGP+A+EK++K +MER+LPCIVDG +P+DIVRSAF RASN Sbjct: 415 KEFISFYGAPATKDIAFAAYGPRASEKVIKDLMERMLPCIVDGRRVPKDIVRSAFQRASN 474 Query: 479 PVSMEKWEWEKTLSITCALINA-----KEEMNVALDTEIDDRSYLFGRLLAIADVLERRA 533 PVSME+WEWEKTLSITCALI KEE V LD DRSYLFGRLLA+ADVLER A Sbjct: 475 PVSMERWEWEKTLSITCALIRKMHIEQKEEWGVPLDKSSTDRSYLFGRLLAVADVLERGA 534 Query: 534 LDSDEKRSTNAIRYMNAFSQHPERTWNTIQQSIQPHQARLGTKLRYYSSLIDEVASKIPL 593 L DE R+TNAIRYMN++S++P RTW TIQ+S+QP+QA+LGTK Y S L+DE+ + Sbjct: 535 LGKDETRATNAIRYMNSYSKNPGRTWKTIQESLQPYQAKLGTKATYLSKLVDEIGDQFEP 594 Query: 594 DQFNNKPLSGKYLLGFYSQRHELYQKKDKNND 625 FNN PL+ +YLLGFYSQR ELY+KK++ + Sbjct: 595 GDFNNNPLTEQYLLGFYSQRRELYKKKEEETN 626 >Q5WBY2.1 Q5WBY2_BACSK Putative uncharacterized protein Length = 627 Score = 813 bits (2099), Expect = 0.0, Method: Compositional matrix adjust. Identities = 392/629 (62%), Positives = 490/629 (77%), Gaps = 13/629 (2%) Query: 1 MSWLLNLYETYQSNQDCVGVIETRYNDREYTLLPVSHTTQNAHIEVNVTEDGEFHSASVL 60 MSWLL L++TY N D VG + DREYTLLP+SHTTQNAHIEV + EDG+F A L Sbjct: 1 MSWLLQLHQTYDDNLDQVGKTVKKGEDREYTLLPISHTTQNAHIEVTIDEDGDFLRAKAL 60 Query: 61 DKSESSTLIPCTEDSASRAGSKVAPYPLHDKLSYVAGDFLAYGGKIKKEE--PFAAYIKQ 118 K+ ST+IPCTE++ASR+GSK+APYPLHDKLSYVAGDF+ YGG+IK ++ PF YIK Sbjct: 61 TKA--STVIPCTEEAASRSGSKIAPYPLHDKLSYVAGDFVKYGGEIKNQDDVPFDTYIKN 118 Query: 119 LGGWADSPYACPKVKSIHSYLSKRRLIQDLVSHSILFLDADHQLIEKWDKKYEALHGEKP 178 L WA+SPY KVK I++YL K RLI+DLVS +L LD + QL+EKWDK YE G KP Sbjct: 119 LAEWANSPYGTEKVKCIYTYLKKGRLIEDLVSEEVLVLDKNQQLLEKWDKSYEEQLGGKP 178 Query: 179 LIFSAVAGEQESAFIRFNVYSPDKELTKVWKDPEMYDSFMQYYSHLLGQEDYCYVTGRML 238 IFS+ A +Q SAF+RFNV+ P+ + VWKD +M+DSF+ +Y+ LG+ED C+V G L Sbjct: 179 AIFSSGATDQYSAFVRFNVFHPE-SIDDVWKDKQMFDSFIAFYNEKLGEEDICFVKGERL 237 Query: 239 PSTDRHANKIRNAADKAKLISSNDTSGFTFRGRFTQSSDAASISYEVSQKAHNALKWLIN 298 PST+RHANKIR+AADKAKLIS+ND +GFTFRGRF S +A ISYEVSQKAHNALKWLI+ Sbjct: 238 PSTERHANKIRHAADKAKLISANDNTGFTFRGRFKTSKEAVGISYEVSQKAHNALKWLIH 297 Query: 299 RQGKIVDQRVFLVWGNDDLNIPDPTEDFFSFDLEPAVARERKSYTHKEYAGEIAKAMDGY 358 RQGK +D+RVFLVW ND+ +P+P +D ER T + +A E+ KA+ GY Sbjct: 298 RQGKTIDERVFLVWSNDNSPVPNPDDDAVDMMRHSNRELERDPETGQLFAKEVTKAIGGY 357 Query: 359 RNKLASEYKSDVNILVLDSATTGRLAVLYYRNMDKQLYLDKLVHWHSTCSWLHRYRKNTQ 418 R+ L +Y+ +VNILVLDSATTGR+AVLYYRN++K+LYLD+L WH C+W HRY+++ + Sbjct: 358 RSDL--KYQPEVNILVLDSATTGRMAVLYYRNLNKELYLDRLEEWHQFCAWEHRYKRD-E 414 Query: 419 DEWVEFYGASATKDIAFAAYGPKANEKIVKGVMERLLPCIVDGHNIPQDIVRSAFYRASN 478 E++ F+GA ATKDIAFAAYGP+A++K+VKG+MER+LPCIVD IP+DIV+SAF+RASN Sbjct: 415 KEFISFFGAPATKDIAFAAYGPRASDKVVKGLMERMLPCIVDKRPIPKDIVKSAFHRASN 474 Query: 479 PVSMEKWEWEKTLSITCAL-----INAKEEMNVALDTEIDDRSYLFGRLLAIADVLERRA 533 PV+ME+WEWEKTLSITCAL I KEE VALD DRSYLFGRLLA+ADVLER A Sbjct: 475 PVAMERWEWEKTLSITCALIRKMFIEKKEEWGVALDQHSKDRSYLFGRLLAVADVLERGA 534 Query: 534 LDSDEKRSTNAIRYMNAFSQHPERTWNTIQQSIQPHQARLGTKLRYYSSLIDEVASKIPL 593 L DE R+TNAIRYMN+F+++P RTW TIQ+S+QP+QA+LGTK Y S LIDE++ + + Sbjct: 535 LGKDETRATNAIRYMNSFAKNPSRTWKTIQESLQPYQAKLGTKSTYLSKLIDEISDQFDI 594 Query: 594 DQFNNKPLSGKYLLGFYSQRHELYQKKDK 622 D FNN PL+ KYLLGFYSQR ELY+KK++ Sbjct: 595 DDFNNTPLTEKYLLGFYSQRRELYKKKEE 623 >B1YHA4.1 B1YHA4_EXIS2 CRISPR-associated protein, Csd1 family Length = 621 Score = 666 bits (1719), Expect = 0.0, Method: Compositional matrix adjust. Identities = 326/631 (51%), Positives = 433/631 (68%), Gaps = 11/631 (1%) Query: 1 MSWLLNLYETYQSNQDCVGVIETRYNDREYTLLPVSHTTQNAHIEVNVTEDGEFHSASVL 60 MS LY+TY+ N VG E+R+ +++TLLP+SHTTQ AH+ V VT DG+FHSA+V+ Sbjct: 1 MSVWKQLYDTYEMNLKHVGQFESRWEGQDFTLLPLSHTTQTAHVTVTVTLDGDFHSATVI 60 Query: 61 DKSESSTLIPCTEDSASRAGSKVAPYPLHDKLSYVAGDFLAYGGKIKKEEPFAAYIKQLG 120 +K +TLIPCTEDSA+RAGS VAPYPLHDKL+YVAGDFL YGG K E AY+ QL Sbjct: 61 EKGHGNTLIPCTEDSANRAGSVVAPYPLHDKLAYVAGDFLKYGGVYKGENAHHAYLSQLK 120 Query: 121 GWADSPYACPKVKSIHSYLSKRRLIQDLVSHSILFLDADHQLIEKWDKKYEALHGEKPLI 180 W ++ P ++SI+ Y+ K +LI+DL+ I +L W + G+KP I Sbjct: 121 AWVETAPYDP-LESIYCYVQKGQLIEDLIQEGIFSATGSGELRWTWKEA-----GDKPPI 174 Query: 181 FSAVAGEQESAFIRFNVYSPDKELTKVWKDPEMYDSFMQYYSHLLGQEDYCYVTGRMLPS 240 + V G E F+RF V S + + W+D +DSF+ +Y G+E C+VTG+ Sbjct: 175 YGLVTGGLEGTFVRFQVRSTEGVQRQPWRDKAFFDSFITFYGTRPGKEGLCFVTGKQERL 234 Query: 241 TDRHANKIRNAADKAKLISSNDTSGFTFRGRFTQSSDAASISYEVSQKAHNALKWLINRQ 300 + +H NKIRN+ DKAKLIS+ND+SGFTFRGRF + +AASISY+ SQKAHNALKWLI RQ Sbjct: 235 SSKHTNKIRNSGDKAKLISANDSSGFTFRGRFDKPDEAASISYQASQKAHNALKWLIQRQ 294 Query: 301 GKIVDQRVFLVWGNDDLNIPDPTEDFFSFDLEPAVARERKSYTHKEYAGEIAKAMDGYRN 360 G+ +DQRVFL+WGN ++P+P E+ S E S+T +E A + A+ G++ Sbjct: 295 GRSIDQRVFLIWGNQQPSLPNPLENTLSLAQLFGEKEELISHTVQEGALAFSDALLGFKR 354 Query: 361 KLASEYKSDVNILVLDSATTGRLAVLYYRNMDKQLYLDKLVHWHSTCSWLHRYRKNTQDE 420 +L K +VNIL LD+ATTGR+A+LYYR D++ Y +L WH+ W + Y+ + Sbjct: 355 RLP---KQEVNILTLDAATTGRMAILYYRTFDQETYFKRLEQWHTKYPWEYIYQDADKKR 411 Query: 421 WVEFYGASATKDIAFAAYGPKANEKIVKGVMERLLPCIVDGHNIPQDIVRSAFYRASNPV 480 V + GA + KDIA YG + NEK++K +ERLL C++D +P DI+R RASNPV Sbjct: 412 QV-YIGAPSLKDIALMTYGTRGNEKLIKATVERLLSCVIDERRVPMDIIRCLTQRASNPV 470 Query: 481 SMEKWEWEKTLSITCALINAKEEMNVALDTEIDDRSYLFGRLLAIADVLERRALDSDEKR 540 M+ WEWEKTLSI C ++N KEEM V+LD EI+DR YLFGRLLA+AD LERRAL D R Sbjct: 471 GMDHWEWEKTLSIACGMVNKKEEMTVSLDQEINDRDYLFGRLLALADYLERRALGQD-NR 529 Query: 541 STNAIRYMNAFSQHPERTWNTIQQSIQPHQARLGTKLRYYSSLIDEVASKIPLDQFNNKP 600 +TNAIRYMNAFSQ+P RTW TIQ ++QP+QA+LG K+ + + IDE+ S++ ++QF NKP Sbjct: 530 ATNAIRYMNAFSQNPARTWMTIQSALQPYQAKLGGKVLFINRQIDEIGSRLTIEQFTNKP 589 Query: 601 LSGKYLLGFYSQRHELYQKKDKNNDSIQASE 631 LSGKYLLGFYSQRHELYQK+++ D + E Sbjct: 590 LSGKYLLGFYSQRHELYQKREETFDKEERGE 620 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.317 0.132 0.392 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 3,867,449,353 Number of extensions: 162856255 Number of successful extensions: 362109 Number of sequences better than 1.0e-05: 56 Number of HSP's gapped: 361769 Number of HSP's successfully gapped: 63 Length of query: 635 Length of database: 3,060,696,203 Length adjustment: 142 Effective length of query: 493 Effective length of database: 1,722,912,073 Effective search space: 849395651989 Effective search space used: 849395651989 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 135 (56.6 bits)