BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0493.0017.p (235 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B8I0X5.1 B8I0X5_CLOCE Beta-phosphoglucomutase 296 9e-79 C1S5P5.1 C1S5P5_9SPHI Beta-phosphoglucomutase EC=5.4.2.6 254 4e-66 B3K4G5.1 B3K4G5_9BACI Beta-phosphoglucomutase 232 2e-59 A9BFA4.1 A9BFA4_PETMO Beta-phosphoglucomutase 232 3e-59 C0AEB1.1 C0AEB1_9BACT Beta-phosphoglucomutase 223 8e-57 >B8I0X5.1 B8I0X5_CLOCE Beta-phosphoglucomutase Length = 219 Score = 296 bits (759), Expect = 9e-79, Method: Compositional matrix adjust. Identities = 137/218 (62%), Positives = 177/218 (81%) Query: 4 QPFEAAIFDLDGVIVDTAKFHYKAWKRLAGELGFAFSESENEQLKGVSRMESLDLLLRCG 63 +PF+AAIFDLDGVIVDTAKFH+ AW RLA ELGF F+E +NE+ KGVSRMESL++LL G Sbjct: 2 KPFKAAIFDLDGVIVDTAKFHFLAWHRLAAELGFEFTEKDNERQKGVSRMESLEVLLEVG 61 Query: 64 GITDVSPERREALASRKNEWYKELLATLTPADVLPGVRSFLGLLRSQGIQTGIASASKNT 123 G+ D+S E++E LA++KNEWYKE L +TPA++LPG + FL LR +GI+ +ASASKN Sbjct: 62 GLLDLSSEKKEELATKKNEWYKEYLYKMTPAEILPGAKDFLKYLRLRGIRIALASASKNA 121 Query: 124 PLIMDKVNIRPLFDAVVDGNSIVRAKPDPEVFLQAARLLGVAPAACFVFEDAAAGVEGAL 183 P+I++K+NI LFDA+VDGNS+ +AKP+PEVFL+AA LG+AP+ CFVFEDA AGVEGA Sbjct: 122 PIILEKLNITDLFDAIVDGNSVSKAKPNPEVFLKAAEQLGIAPSDCFVFEDAQAGVEGAK 181 Query: 184 RAGMRVVGIGDGRLLARSHLAITSFEQLEPVFLMSHIG 221 RAGMRVVGIG+ +L ++ + + F +EPV L+SHI Sbjct: 182 RAGMRVVGIGEPTVLNQAEIVVRGFPDIEPVILLSHIN 219 >C1S5P5.1 C1S5P5_9SPHI Beta-phosphoglucomutase EC=5.4.2.6 Length = 219 Score = 254 bits (649), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 118/209 (56%), Positives = 163/209 (77%), Gaps = 1/209 (0%) Query: 4 QPFEAAIFDLDGVIVDTAKFHYKAWKRLAGELGFAFSESENEQLKGVSRMESLDLLLRCG 63 Q FEA IFDLDGVIVDTA +H+KAWKRLA ELGF F+E++NE+LKG+SR++SL+L+L G Sbjct: 2 QVFEACIFDLDGVIVDTAVYHFKAWKRLANELGFNFTEAQNEKLKGISRVKSLELILAWG 61 Query: 64 GITDVSPERREALASRKNEWYKELLATLTPADVLPGVRSFLGLLRSQGIQTGIASASKNT 123 G+ + S E ++ LA+RKNEWY +++ +TP ++LPG + L LR+ GI+T + SASKN Sbjct: 62 GM-EKSAEEQQILATRKNEWYVDMIHHMTPEEILPGTKELLDNLRAAGIKTALGSASKNA 120 Query: 124 PLIMDKVNIRPLFDAVVDGNSIVRAKPDPEVFLQAARLLGVAPAACFVFEDAAAGVEGAL 183 +I++KV I PLFDA+VDGN++ +KPDPEVFL+ A LG++PA C VFEDA AGV+ A Sbjct: 121 TVILEKVGILPLFDALVDGNTVSASKPDPEVFLKGAEALGISPAKCIVFEDAIAGVQAAK 180 Query: 184 RAGMRVVGIGDGRLLARSHLAITSFEQLE 212 AGM+VVGIG+ +L + L ++S EQ++ Sbjct: 181 AAGMKVVGIGEEDVLGEADLVVSSLEQID 209 >B3K4G5.1 B3K4G5_9BACI Beta-phosphoglucomutase Length = 216 Score = 232 bits (591), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 110/206 (53%), Positives = 146/206 (70%), Gaps = 1/206 (0%) Query: 6 FEAAIFDLDGVIVDTAKFHYKAWKRLAGELGFAFSESENEQLKGVSRMESLDLLLRCGGI 65 A +FDLDGV+VDTAK+HY AWKRLAGELGF F+E +NE+LKGVSRM SLD+LL GG+ Sbjct: 4 LSACLFDLDGVLVDTAKYHYIAWKRLAGELGFEFTEQDNERLKGVSRMASLDILLEVGGV 63 Query: 66 TDVSPERREALASRKNEWYKELLATLTPADVLPGVRSFLGLLRSQGIQTGIASASKNTPL 125 + + + + ALA +KN WY E ++ + +++LPG F+ L+ +GI+ + SASKN L Sbjct: 64 S-LDEDAKLALAEKKNAWYVEYISNMDESEILPGALEFIQALKDRGIKVALGSASKNAML 122 Query: 126 IMDKVNIRPLFDAVVDGNSIVRAKPDPEVFLQAARLLGVAPAACFVFEDAAAGVEGALRA 185 I++ + P FDA++DG +AKPDPEVF AR LG P AC VFEDA AG+E A+RA Sbjct: 123 ILNNTGLTPYFDAIIDGTKTSQAKPDPEVFTLGARELGADPDACVVFEDAEAGIEAAIRA 182 Query: 186 GMRVVGIGDGRLLARSHLAITSFEQL 211 GMR VGIG L R++L + S E+L Sbjct: 183 GMRSVGIGSPETLGRANLVLPSLEEL 208 >A9BFA4.1 A9BFA4_PETMO Beta-phosphoglucomutase Length = 214 Score = 232 bits (591), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 105/213 (49%), Positives = 153/213 (71%), Gaps = 1/213 (0%) Query: 6 FEAAIFDLDGVIVDTAKFHYKAWKRLAGELGFAFSESENEQLKGVSRMESLDLLLRCGGI 65 +A IFDLDGVIVDTAK+HY AWK+LA +L F+E +NE+LKGVSRM+SL+++L G + Sbjct: 2 IKACIFDLDGVIVDTAKYHYMAWKKLADQLNIPFNEKDNERLKGVSRMKSLEIILDLGNL 61 Query: 66 TDVSPERREALASRKNEWYKELLATLTPADVLPGVRSFLGLLRSQGIQTGIASASKNTPL 125 ++S E +E LA +KN WY E ++ + +++LPGV F+ +L+S+GI+ IASASKNT L Sbjct: 62 -NLSLEEKEELAQKKNNWYVEYISKMDKSELLPGVEKFIKILKSKGIKIAIASASKNTKL 120 Query: 126 IMDKVNIRPLFDAVVDGNSIVRAKPDPEVFLQAARLLGVAPAACFVFEDAAAGVEGALRA 185 I++++N +FDAV+DG I AKP+PE+FL A+ L + P C VFEDA AG++ A RA Sbjct: 121 ILERLNFEDVFDAVIDGTMISNAKPNPEIFLTASNYLSLKPEECVVFEDAVAGIQAAKRA 180 Query: 186 GMRVVGIGDGRLLARSHLAITSFEQLEPVFLMS 218 GM+V+G+G+ +L + I +FE + + S Sbjct: 181 GMKVIGVGEEEVLKGADKVIKNFENINLTLIES 213 >C0AEB1.1 C0AEB1_9BACT Beta-phosphoglucomutase Length = 216 Score = 223 bits (569), Expect = 8e-57, Method: Compositional matrix adjust. Identities = 107/185 (57%), Positives = 139/185 (75%), Gaps = 1/185 (0%) Query: 9 AIFDLDGVIVDTAKFHYKAWKRLAGELGFAFSESENEQLKGVSRMESLDLLLRCGGITDV 68 A+F LDGVIVDTA++HY AWKRLA ELGF F+E+ NE+LKGVSRM SL++LL GGIT Sbjct: 12 AMFGLDGVIVDTARYHYLAWKRLAAELGFTFTETHNERLKGVSRMRSLEILLEVGGITAT 71 Query: 69 SPERREALASRKNEWYKELLATLTPADVLPGVRSFLGLLRSQGIQTGIASASKNTPLIMD 128 S E E +A RKN WY + + + +++LPG R +L LR++G++ + SASKN PLI++ Sbjct: 72 SQECEE-MAVRKNVWYVDYIRNMDASELLPGARDYLKNLRARGVKIALGSASKNAPLILE 130 Query: 129 KVNIRPLFDAVVDGNSIVRAKPDPEVFLQAARLLGVAPAACFVFEDAAAGVEGALRAGMR 188 + I LFDA+VDGN + +AKPDPEVFL AR L ++PA C V+EDA AG+E A RAGM+ Sbjct: 131 NLRITELFDAIVDGNHVSKAKPDPEVFLLGARRLDLSPADCVVYEDAEAGIEAAHRAGMK 190 Query: 189 VVGIG 193 VGIG Sbjct: 191 TVGIG 195 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.321 0.138 0.399 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,355,191,262 Number of extensions: 54199133 Number of successful extensions: 154161 Number of sequences better than 1.0e-05: 2870 Number of HSP's gapped: 151857 Number of HSP's successfully gapped: 2871 Length of query: 235 Length of database: 3,060,696,203 Length adjustment: 131 Effective length of query: 104 Effective length of database: 1,826,543,238 Effective search space: 189960496752 Effective search space used: 189960496752 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 129 (54.3 bits)