BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0493.0016.p (374 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B8I0X4.1 B8I0X4_CLOCE Putative uncharacterized protein 433 e-119 B1D6L8.1 B1D6L8_9BACL Putative uncharacterized protein 331 8e-89 A3ZMH7.1 A3ZMH7_9PLAN Putative uncharacterized protein 67 2e-09 Q87Z86.1 Q87Z86_PSESM Putative uncharacterized protein 64 2e-08 Q4K3V2.1 Q4K3V2_PSEF5 Putative uncharacterized protein 62 1e-07 >B8I0X4.1 B8I0X4_CLOCE Putative uncharacterized protein Length = 370 Score = 433 bits (1113), Expect = e-119, Method: Compositional matrix adjust. Identities = 204/351 (58%), Positives = 257/351 (73%), Gaps = 2/351 (0%) Query: 22 LPGGGFVTLTLFTDRFGSQLHLLTVSNGRLAFTVILERGMDIGEIKLESEKISWERDERY 81 LP GG+ +F DR+G +++LTVSNG L FTVILERGMDIGEI L +KI+WER + Y Sbjct: 20 LPAGGYAEKKIFIDRYGFSINILTVSNGLLIFTVILERGMDIGEIFLGQDKITWERKDEY 79 Query: 82 LLHPDHVDLSDNEHSGWDSGFYAAVAAIGPEIFGTPDEVRTVHGTGSYSPALLESLRLVW 141 LLHPD V+L +N GW+ GFYAAVAAIGPEIFGTPDEVRTVHGTGSYS L+S+ ++W Sbjct: 80 LLHPDSVNLHEN--GGWEKGFYAAVAAIGPEIFGTPDEVRTVHGTGSYSQTDLQSVCILW 137 Query: 142 DERQICLEGIVPVRGYGTLPVYEKTIRIITNYGAAALFRKDTVRNLTDTAQPVDDGYHIQ 201 D+ QIC+EG VP++GY PVY+K I+I T Y + + RKD+ NLT QP+DDGYHIQ Sbjct: 138 DKEQICIEGTVPIKGYSAEPVYQKHIKIFTRYNSPLIVRKDSTINLTGERQPLDDGYHIQ 197 Query: 202 LSGAFISGGGSYVLPVTAKKLLLRDSAPPEKDPFAVYAAETRLDPIRCYQYVPEPVEGLS 261 L+G + + GG YVLPV+ K+LLRDSAP E +PF +Y + LDPIRCYQYVPEPV GL Sbjct: 198 LAGEYAAKGGRYVLPVSRDKMLLRDSAPAENNPFEIYEFSSSLDPIRCYQYVPEPVSGLE 257 Query: 262 DLPQVRDYCAASGDGQELTAEMLVNTGNDAAAYVIRSLQCYPRSLLAKRAIEDCMYALEP 321 L ++ DY ++TAEM+VN+ A Y+IR L+ +PRSL+AKRAI++ MYALEP Sbjct: 258 KLIELSDYSDMVQLNGKITAEMIVNSEKTGAVYIIRPLESFPRSLIAKRAIDEPMYALEP 317 Query: 322 CKTRPNSMKQKTIDGEVVYVGPRGQCTGWIILGATRDRVEIDTLTHLIRSA 372 CKTRPNS+ QK IDGE+VY+ PR Q W I+G + + I L +LI A Sbjct: 318 CKTRPNSLCQKAIDGELVYLEPRSQADSWFIIGVVFNNLTIQLLENLIEKA 368 >B1D6L8.1 B1D6L8_9BACL Putative uncharacterized protein Length = 369 Score = 331 bits (848), Expect = 8e-89, Method: Compositional matrix adjust. Identities = 164/352 (46%), Positives = 234/352 (66%), Gaps = 1/352 (0%) Query: 22 LPGGGFVTLTLFTDRFGSQLHLLTVSNGRLAFTVILERGMDIGEIKLESEKISWERDERY 81 LP G++ L D S L ++ +SNG + FTV+ ERG+DIGE+ L +K+SWER E Y Sbjct: 17 LPRSGYIRTRLIKDNNESLLTVIEISNGSMHFTVLPERGLDIGELYLGEQKMSWERSEDY 76 Query: 82 LLHPDHVDLSDNEHSGWDSGFYAAVAAIGPEIFGTPDEVRTVHGTGSYSPALLESLRLVW 141 LLHP +VDL ++ +GW GFY AVA+IGPE+FGTP E T+HG+GSYS A ES+++ W Sbjct: 77 LLHPSNVDLYESNGTGWMKGFYGAVASIGPELFGTPGEGFTLHGSGSYSIAEPESIQVFW 136 Query: 142 DERQICLEGIVPVRGYGTLPVYEKTIRIITNYGAAALFRKDTVRNLTDTAQPVDDGYHIQ 201 DE+ + + G VPV ++EK I++ T +G++ + R++TV N + + Q +DDGYHIQ Sbjct: 137 DEQSVRIAGKVPVIDRNGELLFEKLIQMSTEWGSSLILREETVINKSSSKQVLDDGYHIQ 196 Query: 202 LSGAFISGGGSYVLPVTAKKLLLRDSAPPEKDPFAVYAAETRLDPIRCYQYVPEPVEGLS 261 LSG+F+ GG YVLPV+ +LL+RDSAP E+DPF + +++ P+RCYQYVP PV+GL Sbjct: 197 LSGSFLHQGGRYVLPVSQHELLIRDSAPLEEDPFHIPSSKEAY-PMRCYQYVPRPVDGLY 255 Query: 262 DLPQVRDYCAASGDGQELTAEMLVNTGNDAAAYVIRSLQCYPRSLLAKRAIEDCMYALEP 321 + Y + + LT EM+VNT N A YVIR L +PRSL+AK+ M+ALEP Sbjct: 256 QFDKAAPYLSKMNVSRGLTGEMIVNTQNTYAGYVIRPLFDFPRSLIAKQNDSSFMFALEP 315 Query: 322 CKTRPNSMKQKTIDGEVVYVGPRGQCTGWIILGATRDRVEIDTLTHLIRSAA 373 C++RPN M QK DGE +Y+ + ++G + + EI +L ++I SA Sbjct: 316 CRSRPNRMSQKITDGEALYLREGEAVSSSCLIGLSDSKKEIQSLENMILSAV 367 >A3ZMH7.1 A3ZMH7_9PLAN Putative uncharacterized protein Length = 387 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 77/325 (23%), Positives = 129/325 (39%), Gaps = 49/325 (15%) Query: 41 LHLLTVSNGRLAFTVILERGMDIGEIKLESEKISWERDERYLLHPDHVDLSDNEHSGWDS 100 + ++ V++G ++ RGM + + + E++ W +HP V LS++ GW Sbjct: 50 VDVVEVTSGGFRLRILPTRGMGVWDAYCDGERVGWNSPVPGPVHPQFVALSESSGIGWLD 109 Query: 101 GFYAAVAAIGPEIFGTPDE-------VRTVHGTGSYSPALLESLRLVWDERQICLEGIVP 153 GF + G E G P+ + +HG + PA + +I +G V Sbjct: 110 GFNELLVRCGLESNGAPEFDAATHRLIYPLHGRIANKPAQKVTA-------EITDDGEVI 162 Query: 154 VRGYGTLPVYEK-----TIRIITNY----GAAALFRKDTVRNLTDTAQPVDDGYHIQLSG 204 +RG VYE +++ Y G KDT+ NL+ YHI L Sbjct: 163 IRG----EVYETRFLVYNVKLTVEYRIARGENGFRLKDTITNLSAKPTEAQLLYHINLGA 218 Query: 205 AFISGGGSYVLPVTAKKLLLRDSAPPEKDPFAVYAAETRLDPIRCYQYVPEPVEGLSDLP 264 +S G V+P AKK++ R+ +AA + ++ +P G ++ Sbjct: 219 PVLSEGAQAVIP--AKKIVPRND----------HAA----GDVNNWERYCDPQAGFEEMV 262 Query: 265 QVRDYCAASGDGQELTAEMLVNTGND---AAAYVIRSLQCYPRSLLAKRAIEDCMYALEP 321 + CAA +G+ T ML N D + + R L C+ A + + LEP Sbjct: 263 YFFE-CAADAEGRAPT--MLKNAAGDRGVSVTFDTRQLPCFSLWKNTAAAADGYVTGLEP 319 Query: 322 CKTRPNSMKQKTIDGEVVYVGPRGQ 346 PN + VV + P G+ Sbjct: 320 ATNFPNPRSFEAQHDRVVKLAPGGE 344 >Q87Z86.1 Q87Z86_PSESM Putative uncharacterized protein Length = 381 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 51/198 (25%), Positives = 94/198 (47%), Gaps = 12/198 (6%) Query: 29 TLTLFTDRFGSQ--LHLLTVSNGRLAFTVILERGMDIGEIKLESEKISWERDERYLLHPD 86 T+TL T G Q + ++ + NG + +V+ RGM++ + + ++ W+ + +++P Sbjct: 28 TITLRTLHGGRQEGVSIIDIDNGTMKLSVVPTRGMNVLQASVGDVRMGWDSPVKDVVNPA 87 Query: 87 HVDLSDNEHSGWDSGFYAAVAAIGPEIFGTP----DEVRTVHGTGSYSPALLESLRLVWD 142 ++L+ GW GF VA G E G P E+ T+HG + PA +L++ D Sbjct: 88 FIELNGRGGLGWLEGFNELVARCGYEWVGHPGMDNGELLTLHGRAANIPASKVTLQI--D 145 Query: 143 ER---QICLEGIVPVRGYGTLPVYEKTIRIITNYGAAALFRKDTVRNLTDTAQPVDDGYH 199 E+ I L+G + + + + +T ++T G+ + DT+ N D + YH Sbjct: 146 EKPPYAIRLKGELKEQAFKKVDFSVQT-ELVTEPGSTSFSLNDTLTNNGDYPKEYQALYH 204 Query: 200 IQLSGAFISGGGSYVLPV 217 S F+ G + PV Sbjct: 205 SNFSTPFLEQGARFEAPV 222 >Q4K3V2.1 Q4K3V2_PSEF5 Putative uncharacterized protein Length = 424 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 57/235 (24%), Positives = 101/235 (42%), Gaps = 13/235 (5%) Query: 29 TLTLFTDRFGSQ--LHLLTVSNGRLAFTVILERGMDIGEIKLESEKISWERDERYLLHPD 86 ++TL T G Q + ++ + NG + +V+ RGM++ + + ++ W+ + +++P Sbjct: 72 SVTLRTLHGGRQEGVSIVDIDNGVMQLSVVPTRGMNVLQASVGDVRLGWDSPVKEVVNPA 131 Query: 87 HVDLSDNEHSGWDSGFYAAVAAIGPEIFGTP----DEVRTVHGTGSYSPALLESLRLVWD 142 ++L+ GW GF VA G E G P E+ T+HG + PA +L + D Sbjct: 132 FIELNGRGGLGWLEGFNELVARCGYEWVGHPGLDNGELLTLHGRAANIPASKVTLHI--D 189 Query: 143 ER---QICLEGIVPVRGYGTLPVYEKTIRIITNYGAAALFRKDTVRNLTDTAQPVDDGYH 199 E+ I L G + + + + + ++T G+ DT+ N D + YH Sbjct: 190 EQPPYAIHLRGELKEQAFKKVD-FSVATELVTEPGSTRFALNDTLTNNGDYPKEYQALYH 248 Query: 200 IQLSGAFISGGGSYVLPVTAKKLLLRDSAPPEKDPFAVYAAETRLDPIRCYQYVP 254 S F+ G + PV + D A + + Y TR Y VP Sbjct: 249 SNFSTPFLEQGAKFAAPV-KQVSPFNDKARADLADWQTYRGPTRDYDETVYNLVP 302 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.320 0.138 0.416 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,374,766,526 Number of extensions: 106060872 Number of successful extensions: 208157 Number of sequences better than 1.0e-05: 14 Number of HSP's gapped: 208147 Number of HSP's successfully gapped: 14 Length of query: 374 Length of database: 3,060,696,203 Length adjustment: 137 Effective length of query: 237 Effective length of database: 1,770,017,148 Effective search space: 419494064076 Effective search space used: 419494064076 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 132 (55.5 bits)