BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0493.0013.p
         (338 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q7X0Z0.1 Q7X0Z0_BACCI Endo-beta-N-acetylglucosaminidase               187   1e-45
B1D6B3.1 B1D6B3_9BACL Alpha amylase catalytic region                  178   7e-43
B1D995.1 B1D995_9BACL S-layer domain protein                          177   1e-42
B1DD62.1 B1DD62_9BACL S-layer domain protein                          174   1e-41
B3K9G8.1 B3K9G8_9BACI Metallophosphoesterase                          171   1e-40

>Q7X0Z0.1 Q7X0Z0_BACCI Endo-beta-N-acetylglucosaminidase
          Length = 1936

 Score =  187 bits (475), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 110/337 (32%), Positives = 166/337 (49%), Gaps = 5/337 (1%)

Query: 6    ATAIELPLKAGELLGTNSLRLQGDGIELVLAPELLKQLAGAVPAAESS----GXXXXXXX 61
            AT I LP +A EL   + + L+ D + L +   LLK+LA  +   + S            
Sbjct: 1598 ATEIVLPPQAAELPQQHKVELKTDRVTLEVPSGLLKKLASRIADKDVSISLKAAPLTAAQ 1657

Query: 62   XXXXXXXXXXXXXXGVALKGKLIEYDLSLSGADGAVHRLEKYQVPVGFSWPAE-GLNPKL 120
                           + L G + ++ LS +GA+G+   L ++  P+  S   E G+NP+ 
Sbjct: 1658 AKDAISKNKSVSPSAITLAGGVYDFKLSAAGANGSYAELSEFDQPITISLKIESGVNPEQ 1717

Query: 121  LGLYRVESDGTLTYLGGAAEDGGLKALLDGSGMYALLEYSKQFSDVPVTHWAFEALRELS 180
            +G+Y +  +G L Y+GG   DG L A +     YA+L+  K F DVP  HWA   + +L+
Sbjct: 1718 VGIYYISGNGKLDYIGGEYRDGELAAEVTHFSQYAVLKVVKVFDDVPAGHWAEGVISKLT 1777

Query: 181  AKHLIQGISEQAYQPGRNITRAEFVQLIANTLQLNGSGTTSFADVPEGAWYQQAISGMVK 240
            ++ ++ G SE  ++P R +TRAEF  L+A  L+L   GT +FADV  G WY  A++  V+
Sbjct: 1778 SRLMVDGTSETTFEPERVVTRAEFTALLARALKLTAGGTPTFADVKAGDWYADAVTAAVE 1837

Query: 241  AGLITGRTPEAFQPAAEISREEMTVILMRAYRLQNGVIPAAPASPSLKDAAGISDWXXXX 300
            AG+  G++   F+P A I+REEM V+ MRAY       P+     S  D   IS W    
Sbjct: 1838 AGIAEGKSAGQFEPQARITREEMVVMTMRAYNKAKDKGPSTGVEASFTDENQISAWAVEQ 1897

Query: 301  XXXXXXLGFVKGRADGTFXXXXXXXXXXXXQILMNYL 337
                  L  ++GRA G F            Q++ N L
Sbjct: 1898 VKAAAALQLIQGRAQGKFEPQGTATRAEAVQVIFNML 1934


>B1D6B3.1 B1D6B3_9BACL Alpha amylase catalytic region
          Length = 2160

 Score =  178 bits (451), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 117/329 (35%), Positives = 173/329 (52%), Gaps = 26/329 (7%)

Query: 11   LPLKAGELLGTNSLRL-QGDGIELV---LAPELLKQLAGAVPAAESSGXXXXXXXXXXXX 66
            LP+ A +LLG   L L QGD   L+   +  EL+K+  G+V +A S              
Sbjct: 1816 LPVGAADLLGGKPLELKQGDLTLLIPSAMLQELMKKAGGSVSSAASH---IVLQLKPLDA 1872

Query: 67   XXXXXXXXXGVALKGK-------LIEYDLSL---SGADGAVHRLEKYQVPVGFSWPAEG- 115
                       A+ G        +IE+ L+L   +G + AV  L K++ P+  ++  +  
Sbjct: 1873 AAERDLLKKAAAVDGSELSPASAVIEFRLALVDGNGKEAAV--LSKFEEPLKLTFKLDSK 1930

Query: 116  LNPKLLGLYRVESDGTLTYLGGAAE-DGGLKALLDGSGMYALLEYSKQFSDVPVTHWAFE 174
             + KL G+Y V  DG L Y+GG    DG + A +     YA LEYSK F DVP+THWA+E
Sbjct: 1931 ADKKLTGIYYVADDGKLEYVGGTLNADGTITADIQHFSKYAALEYSKIFGDVPLTHWAWE 1990

Query: 175  ALRELSAKHLIQGISEQAYQPGRNITRAEFVQLIANTLQLNGSGTTSFADVPEGAWYQQA 234
             +REL++KH++ G++   ++P R++TRAEF  L+   + L  +  T F DV   +WY  +
Sbjct: 1991 MIRELASKHVVTGVTADRFEPERSVTRAEFAALLVRAMNLQATKPTGFTDVAASSWYADS 2050

Query: 235  ISGMVKAGLITGRTPEAFQPAAEISREEMTVILMRAYRLQNGVIPAAPASPS-----LKD 289
            ++   +AG+I GRT  +F P A I REEMTV+LMRAY +++G    + A  S       D
Sbjct: 2051 VAAAAEAGIIKGRTATSFAPNAVIMREEMTVMLMRAYEVKSGKKLESSADGSTDGSTFTD 2110

Query: 290  AAGISDWXXXXXXXXXXLGFVKGRADGTF 318
            +A I DW          LGF+ G+  G F
Sbjct: 2111 SAAIHDWAKASIDAAVKLGFLNGKGQGKF 2139


>B1D995.1 B1D995_9BACL S-layer domain protein
          Length = 543

 Score =  177 bits (450), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 107/316 (33%), Positives = 153/316 (48%), Gaps = 4/316 (1%)

Query: 5   QATAIELPLKAGELLGTNSLRLQGDG-IELVLAPELLKQLAGAVPAAESSGXXXXXXXXX 63
            AT I+LP    ELLG ++L +   G  EL +   +  +L   + AA+  G         
Sbjct: 208 SATLIKLPANTDELLGKDALNIITSGKAELSIPSGVFAELKKTLTAAQLQGGSIALTVKP 267

Query: 64  XXXXXXXXXXXXGVALKGKLIEYDLSLSGADGAVHRLEKYQVPVGFSWPAEG-LNPKLLG 122
                          L G + E  L    ADG  + L +++ PV    P +   NPKL  
Sbjct: 268 VEGAAKPTLGT-DTKLSGPIYELKLQWIAADGTSYDLHQFKEPVTLRLPVDASTNPKLAS 326

Query: 123 LYRVESDGTLTYLGGAAEDGGLKALLDGSGMYALLEYSKQFSDVPVTHWAFEALRELSAK 182
           ++ +   G   ++GG   +G   A L     YA+LE +K FSDVP ++WA   ++EL AK
Sbjct: 327 IFYLPDSGAPEFVGGTYGNGVYVAQLSHFSSYAILEINKNFSDVPSSYWASGVIKELFAK 386

Query: 183 HLIQGISEQAYQPGRNITRAEFVQLIANTLQLNGSGTTSFADVPEGAWYQQAISGMVKAG 242
            ++ G +   ++P R++TRAEF  L+   L L   GT +F D+P GAWY   ++   KAG
Sbjct: 387 QIVTGTTASTFEPNRSVTRAEFTALLVRALGLKAEGTPAFTDIPAGAWYAADVATAYKAG 446

Query: 243 LITGRTPEAFQPAAEISREEMTVILMRAYRLQNGVIPAAPASPSLKDAAGISDWXXXXXX 302
           ++ G +   F P A I+R+EM  + MR Y L  G    A A P  KD A IS W      
Sbjct: 447 IVQGVSSTTFSPGASITRQEMVTLAMRGYELMTGKPADATAEP-FKDEASISAWALNNVK 505

Query: 303 XXXXLGFVKGRADGTF 318
               LG V+GRA G F
Sbjct: 506 KAAALGIVQGRAKGEF 521


>B1DD62.1 B1DD62_9BACL S-layer domain protein
          Length = 1521

 Score =  174 bits (441), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 107/339 (31%), Positives = 161/339 (47%), Gaps = 10/339 (2%)

Query: 9    IELPLKAGELLGTNSLRLQGDGIELVLAPELLKQLAGAVPAAESSGXXXXXXXXXX---- 64
            ++ P    +L+G N+L+L  DG+ L    + L  + GAV  A+++G              
Sbjct: 1180 VQFPSNVIQLVGDNTLKLVMDGMTLSFTKDDLAGIMGAVTGAKAAGAKISFTAVKVPNGE 1239

Query: 65   -XXXXXXXXXXXGVALKGKLIEYDLSLS--GADGAVHRLEKYQVPVGFSWPAE-GLNPKL 120
                         V L      YD  LS   ADG +  +  +  P+  ++  +   NP L
Sbjct: 1240 VNSLINNQEVNSTVKLTTASTVYDFRLSVIAADGTIVPVSTFDEPLKLTFTVDPNANPDL 1299

Query: 121  LGLYRVESDGTLTYLGGAAEDGGLKALLDGSGMYALLEYSKQFSDVPVTHWAFEALRELS 180
            LG+Y + +DG L Y+GG   DG + A +     YA+LEY K F+DV    WA + +++++
Sbjct: 1300 LGVYYIAADGALQYVGGTLADGVMTAYVKHFSQYAVLEYDKSFTDVSPAFWAHDIIQQIA 1359

Query: 181  AKHLIQGISEQAYQPGRNITRAEFVQLIANTLQLNG-SGTTSFADVPEGAWYQQAISGMV 239
            AKH+I G+S+  + P  N+TRAEF  +IA  L L    G+  F DV   AWY   I  + 
Sbjct: 1360 AKHIITGVSDTLFNPEDNVTRAEFTAMIARALGLEEVDGSAIFLDVKADAWYAGYIGAVS 1419

Query: 240  KAGLITGRTPEAFQPAAEISREEMTVILMRAYRLQNGVIPAAPAS-PSLKDAAGISDWXX 298
            KAG++ GR+  AF P   I+REEM V+ +RAY    G          S  D + IS W  
Sbjct: 1420 KAGIVMGRSSIAFAPNDAITREEMAVMAVRAYEYVKGKQAEVEKDIASFADKSSISAWAQ 1479

Query: 299  XXXXXXXXLGFVKGRADGTFXXXXXXXXXXXXQILMNYL 337
                    LG +KGR++  F            Q++ N +
Sbjct: 1480 DAASLAQELGLIKGRSNNLFAPQALMTRAESAQVMGNLI 1518


>B3K9G8.1 B3K9G8_9BACI Metallophosphoesterase
          Length = 2050

 Score =  171 bits (433), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 105/347 (30%), Positives = 159/347 (45%), Gaps = 15/347 (4%)

Query: 4    GQATAIELPLKAGELLGTNSLRLQGDGIELVLAPELLKQLAGAVPAAES-------SGXX 56
            G  T I LP  A ++L   S+ L+   + L +  E+L+QL     A +        S   
Sbjct: 1704 GNFTDITLPGNAADILKDGSIHLEAKNLSLTIPAEVLRQLGALADAGQLEKGTIKLSAAT 1763

Query: 57   XXXXXXXXXXXXXXXXXXXGVALKGKLIEYDLSLSGADGAVHRLEKYQVPVGFSWP-AEG 115
                                +   G ++E++L L+ ADG V+ L ++  P+    P +  
Sbjct: 1764 LTEAEMKQRIAQAARVSGAKLTAAGAMLEFELKLTTADGKVYSLTEFDHPIMLELPVSSD 1823

Query: 116  LNPKLLGLYRVESDGTLTYLGGAAEDGGLKALLDGSGMYALLEYSKQFSDVPVTHWAFEA 175
             + K + +Y V   G L Y+GG  +DG + A +     Y LL+Y K F+DVP + WA E 
Sbjct: 1824 AHGKRISMYYVSGSGELEYIGGVNKDGRMAAGIRHFSAYGLLDYEKTFADVPSSFWAAEV 1883

Query: 176  LRELSAKHLIQGISEQAYQPGRNITRAEFVQLIANTLQLNGSGTTSFADVPEGAWYQQAI 235
            + +L+AK LI+G+S   + P + +TRAEF  ++   L L   G   FADV  G WY +A+
Sbjct: 1884 IGDLAAKQLIEGVSADRFAPAQQVTRAEFAAMLVRLLDLKAEGPAPFADVASGKWYAEAV 1943

Query: 236  SGMVKAGLITGRTPEAFQPAAEISREEMTVILMRAY----RLQNGVIPAAPASPSLKDAA 291
            S   ++G++ G   + F P A I R+EM  +L+RAY    + Q   I A        D A
Sbjct: 1944 SAAAQSGIVNGTAKDRFAPDAPIKRQEMAAMLVRAYAHAMKQQQENISAGSG---FADLA 2000

Query: 292  GISDWXXXXXXXXXXLGFVKGRADGTFXXXXXXXXXXXXQILMNYLR 338
               DW          LGFV+G A   F            Q++ N L 
Sbjct: 2001 ESPDWVREAVETAHALGFVQGHAPSRFAPEGLTTRAESAQVIHNLLN 2047


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.316    0.135    0.386 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 1,745,115,333
Number of extensions: 69933490
Number of successful extensions: 166415
Number of sequences better than 1.0e-05: 1334
Number of HSP's gapped: 164668
Number of HSP's successfully gapped: 1504
Length of query: 338
Length of database: 3,060,696,203
Length adjustment: 136
Effective length of query: 202
Effective length of database: 1,779,438,163
Effective search space: 359446508926
Effective search space used: 359446508926
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 131 (55.1 bits)