BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0492.0008.p
         (195 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

C0CZS9.1 C0CZS9_9CLOT Putative uncharacterized protein                168   2e-40
B6FQT7.1 B6FQT7_9CLOT Putative uncharacterized protein                147   3e-34
B0NHW2.1 B0NHW2_EUBSP Putative uncharacterized protein                142   2e-32
A8SM92.1 A8SM92_9FIRM Putative uncharacterized protein                136   9e-31
A3XE06.1 A3XE06_9RHOB Putative uncharacterized protein                 65   3e-09

>C0CZS9.1 C0CZS9_9CLOT Putative uncharacterized protein
          Length = 318

 Score =  168 bits (426), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 78/135 (57%), Positives = 103/135 (76%), Gaps = 1/135 (0%)

Query: 23  IQQIAQNYIHLEESITSQLRMAAGSHHVTSGTFREDIWKSLFEQIIPRKFSIEQSVFIID 82
           I+++A+NY  LE+S+ +QLR+   +H +T GT+RE +WKSLFE IIP+K+ IEQSVFIID
Sbjct: 10  IEKLAENYNQLEQSLVNQLRLQVPNHQLTVGTYRERVWKSLFEMIIPKKYCIEQSVFIID 69

Query: 83  SHGLVSKEVDLAIFDEQYTPYIFRLGRIKYIPIEAVAVVVQCKSNNIHGRNKRENLRTWS 142
           S+G +S+EVDLA++DE YTPYIF  G IK+IPIEAVAVVVQCKS  ++     EN   W 
Sbjct: 70  SYGNISREVDLAVYDEMYTPYIFNYGEIKFIPIEAVAVVVQCKS-GVNDTATTENAIEWV 128

Query: 143 KSITNLKTSLKSVAR 157
            ++  LKTS+ SV R
Sbjct: 129 NTVKALKTSMDSVTR 143


>B6FQT7.1 B6FQT7_9CLOT Putative uncharacterized protein
          Length = 299

 Score =  147 bits (372), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 80/156 (51%), Positives = 100/156 (64%), Gaps = 9/156 (5%)

Query: 15  MRKAA----PKIIQQIAQNYIHLEESITSQLRMAAGSHHVTSGTFREDIWKSLFEQIIPR 70
           MRK       K I++I +NY  +E++  +QL     +H  T G +RE IW+ +FE I+P+
Sbjct: 3   MRKGVDVMDSKTIEKIKENYKKMEKNYVNQLFFQT-THGSTIGRYREKIWEEMFESIVPK 61

Query: 71  KFSIEQSVFIIDSHGLVSKEVDLAIFDEQYTPYIFRLGRIKYIPIEAVAVVVQCKSNNIH 130
           KF IEQSVFIIDS G VS EVDLAIFDE YTPY+FR G IK+IPIEAV  VV+CKS ++ 
Sbjct: 62  KFVIEQSVFIIDSKGNVSNEVDLAIFDEMYTPYVFRYGEIKFIPIEAVVAVVECKSTSMD 121

Query: 131 GRNKRENLRTWSKSITNLKTSLKSVARIHTGIAKGE 166
            +     L  W  SI  LKTS +SV R    I  GE
Sbjct: 122 EK----LLENWINSIEQLKTSNRSVVRTINRIVCGE 153


>B0NHW2.1 B0NHW2_EUBSP Putative uncharacterized protein
          Length = 295

 Score =  142 bits (357), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 71/145 (48%), Positives = 97/145 (66%), Gaps = 4/145 (2%)

Query: 21  KIIQQIAQNYIHLEESITSQLRMAAGSHHVTSGTFREDIWKSLFEQIIPRKFSIEQSVFI 80
           K I+ I  NY  +E S  +QL +    H  T GT RE+IW  +FE +IP+KF +E+SVF+
Sbjct: 9   KAIKNIKNNYKQIERSKVNQLYLEQDLHPTTIGTAREEIWGEIFEGLIPKKFVVERSVFL 68

Query: 81  IDSHGLVSKEVDLAIFDEQYTPYIFRLGRIKYIPIEAVAVVVQCKSNNIHGRNKRENLRT 140
           ID+   VS E DL I DE YTPYIFR G IK+IPIEAVA V+QCKS ++     +++L  
Sbjct: 69  IDAKDNVSLEADLVIMDEMYTPYIFRYGSIKFIPIEAVAAVIQCKSTSVD----KKSLGE 124

Query: 141 WSKSITNLKTSLKSVARIHTGIAKG 165
           W++SI  L+TS ++VAR+ T  + G
Sbjct: 125 WAESIKILRTSERAVARLATMFSTG 149


>A8SM92.1 A8SM92_9FIRM Putative uncharacterized protein
          Length = 124

 Score =  136 bits (343), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 60/107 (56%), Positives = 82/107 (76%)

Query: 23  IQQIAQNYIHLEESITSQLRMAAGSHHVTSGTFREDIWKSLFEQIIPRKFSIEQSVFIID 82
           I+ I +NY+ +E  + +QL     +H +T+GT+RE+IW   F +I+P+KF+I +SVFIID
Sbjct: 13  IRDIKENYLKMERELVTQLNYNVSNHDLTAGTYREEIWADFFRRIVPKKFNIARSVFIID 72

Query: 83  SHGLVSKEVDLAIFDEQYTPYIFRLGRIKYIPIEAVAVVVQCKSNNI 129
           S   +SKEVD+AI+DEQYTPYIF  G IK+IPIEAVA VVQCKS ++
Sbjct: 73  SKENISKEVDIAIYDEQYTPYIFNYGLIKFIPIEAVAAVVQCKSTSL 119


>A3XE06.1 A3XE06_9RHOB Putative uncharacterized protein
          Length = 241

 Score = 65.5 bits (158), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 53/95 (55%), Gaps = 3/95 (3%)

Query: 33  LEESITSQLRMA--AGSHHVTSGTFREDIWKSLFEQIIPRKFSIEQSVFIIDSHGLVSKE 90
           L   I ++L  A  A +H  T G   E +W  L +  +P+++ +E S  ++DS G  S +
Sbjct: 13  LHNGIQNELHTARKALAHPGTKGDASEQVWLELLQTYLPKRYQVE-SAHVVDSEGNFSDQ 71

Query: 91  VDLAIFDEQYTPYIFRLGRIKYIPIEAVAVVVQCK 125
           +D+ +FD QY+P+IF     K +P E+V  V + K
Sbjct: 72  MDVVVFDRQYSPFIFNFKAAKIVPAESVYAVFEAK 106


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.317    0.132    0.372 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 1,014,130,455
Number of extensions: 37630049
Number of successful extensions: 107912
Number of sequences better than 1.0e-05: 23
Number of HSP's gapped: 107902
Number of HSP's successfully gapped: 23
Length of query: 195
Length of database: 3,060,696,203
Length adjustment: 128
Effective length of query: 67
Effective length of database: 1,854,806,283
Effective search space: 124272020961
Effective search space used: 124272020961
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 127 (53.5 bits)