BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0490.0061.p
         (111 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B3KJ22.1 B3KJ22_9BACI ATPase, P-type (Transporting), HAD superfa...   117   4e-25
B1DHM9.1 B1DHM9_9BACL Calcium-translocating P-type ATPase, PMCA-...   104   3e-21
Q9K9X9.1 Q9K9X9_BACHD Cation-transporting ATPase EC=3.6.1.-            97   4e-19
C0ZJS2.1 C0ZJS2_BREBN Cation-transporting ATPase EC=3.6.1.-            88   2e-16
A6CPS7.1 A6CPS7_9BACI Cation-transporting ATPase, E1-E2 family p...    81   3e-14

>B3KJ22.1 B3KJ22_9BACI ATPase, P-type (Transporting), HAD superfamily,
           subfamily IC
          Length = 931

 Score =  117 bits (292), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 51/62 (82%), Positives = 55/62 (88%)

Query: 1   LLIGLCTLAAFWLTLRIDPGSPQQLVRAQSVAFATLVMAQLIHVFDCRSSRSVFHRNPFQ 60
           +LIGLCTL AFW+TLRI P  P QL +AQSVAFATLVMAQLIHVFDCRSSRS+FHRNP Q
Sbjct: 792 ILIGLCTLGAFWVTLRIAPNDPAQLAKAQSVAFATLVMAQLIHVFDCRSSRSIFHRNPLQ 851

Query: 61  NK 62
           NK
Sbjct: 852 NK 853


>B1DHM9.1 B1DHM9_9BACL Calcium-translocating P-type ATPase, PMCA-type
          Length = 924

 Score =  104 bits (259), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 45/63 (71%), Positives = 57/63 (90%), Gaps = 1/63 (1%)

Query: 1   LLIGLCTLAAFWLTLRIDPGSP-QQLVRAQSVAFATLVMAQLIHVFDCRSSRSVFHRNPF 59
           +LIG+CTL AFW+TL++ PG+  +QL +AQ+VAFATLV+AQLIHVFDCRSSRS+FHRN F
Sbjct: 789 VLIGVCTLGAFWITLKLAPGTAAEQLTKAQTVAFATLVLAQLIHVFDCRSSRSIFHRNLF 848

Query: 60  QNK 62
           QN+
Sbjct: 849 QNR 851


>Q9K9X9.1 Q9K9X9_BACHD Cation-transporting ATPase EC=3.6.1.-
          Length = 902

 Score = 97.1 bits (240), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 45/62 (72%), Positives = 50/62 (80%), Gaps = 3/62 (4%)

Query: 1   LLIGLCTLAAFWLTLRIDPGSPQQLVRAQSVAFATLVMAQLIHVFDCRSSRSVFHRNPFQ 60
            +IG+ TLAAFWLTL+    +P  L RAQSVAF TLVMAQLIHVFDCRS  SVFHRNPF+
Sbjct: 785 FMIGVVTLAAFWLTLQ---ANPDDLTRAQSVAFVTLVMAQLIHVFDCRSEYSVFHRNPFE 841

Query: 61  NK 62
           NK
Sbjct: 842 NK 843


>C0ZJS2.1 C0ZJS2_BREBN Cation-transporting ATPase EC=3.6.1.-
          Length = 934

 Score = 88.2 bits (217), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 43/62 (69%), Positives = 47/62 (75%), Gaps = 3/62 (4%)

Query: 1   LLIGLCTLAAFWLTLRIDPGSPQQLVRAQSVAFATLVMAQLIHVFDCRSSRSVFHRNPFQ 60
            LIG  TL AFWLTL+    +P  LV AQ+VAF TLVMAQLIHVFDCRS  SVFHRN F+
Sbjct: 799 FLIGAMTLLAFWLTLK---ENPNDLVHAQTVAFVTLVMAQLIHVFDCRSQYSVFHRNVFE 855

Query: 61  NK 62
           NK
Sbjct: 856 NK 857


>A6CPS7.1 A6CPS7_9BACI Cation-transporting ATPase, E1-E2 family protein
          Length = 892

 Score = 80.9 bits (198), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 41/61 (67%), Positives = 44/61 (72%), Gaps = 3/61 (4%)

Query: 1   LLIGLCTLAAFWLTLRIDPGSPQQLVRAQSVAFATLVMAQLIHVFDCRSSRSVFHRNPFQ 60
            LIGL TLAAF L  +     P  L  AQ+VAFATLVMAQLIHVFDCRS +SVF RNPF 
Sbjct: 774 FLIGLSTLAAFILAYK---QHPDHLAYAQTVAFATLVMAQLIHVFDCRSEKSVFARNPFG 830

Query: 61  N 61
           N
Sbjct: 831 N 831


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.330    0.136    0.468 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 467,658,070
Number of extensions: 9225035
Number of successful extensions: 25701
Number of sequences better than 1.0e-05: 97
Number of HSP's gapped: 25743
Number of HSP's successfully gapped: 97
Length of query: 111
Length of database: 3,060,696,203
Length adjustment: 78
Effective length of query: 33
Effective length of database: 2,325,857,033
Effective search space: 76753282089
Effective search space used: 76753282089
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 126 (53.1 bits)