BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0490.0050.p (301 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KJ25.1 B3KJ25_9BACI Putative uncharacterized protein 351 4e-95 A8MH78.1 A8MH78_ALKOO Putative uncharacterized protein 232 4e-59 A4J572.1 A4J572_DESRM Putative uncharacterized protein 229 3e-58 B4BEJ0.1 B4BEJ0_CLOTM Putative uncharacterized protein 224 8e-57 A3DF20.1 A3DF20_CLOTH Putative uncharacterized protein 223 1e-56 >B3KJ25.1 B3KJ25_9BACI Putative uncharacterized protein Length = 295 Score = 351 bits (901), Expect = 4e-95, Method: Compositional matrix adjust. Identities = 173/297 (58%), Positives = 224/297 (75%), Gaps = 3/297 (1%) Query: 6 LSFSMTGYGQSSLQFCGYKITFEVKSVNNRYCEVVLRMPRDWTVYEDMLRRQVQAHIKRG 65 +S SMTGYGQS + F GY I+FEVKSVN+RYCE+V RMPR+W ++ED LRR VQ+ I RG Sbjct: 1 MSLSMTGYGQSVVDFQGYSISFEVKSVNHRYCEIVFRMPREWALFEDTLRRAVQSRIGRG 60 Query: 66 RVDVIINREHADEADSAQVLNRSAVRSYLKSAQQLREEFGITGELQLRDILALPGVMELK 125 R+DV IN+E+ E+ A VLN + V++YL++A+ L+ +GITG+L +RDIL LP V+ Sbjct: 61 RIDVYINKENNGESQGA-VLNHAMVQAYLQAAEDLKS-YGITGDLAVRDILTLPDVLVTP 118 Query: 126 EDVQALASSQDL-KDTLELGLHQSLEALMDMRAREGGFLAADLLGRLNHLEELHAEMAVL 184 + + Q L D L GL Q+LE L+ MR+REG FLA D+ RL+ L++LH EM L Sbjct: 119 SGLSMDEAQQRLWNDALLQGLEQALEGLVQMRSREGAFLAKDIGQRLDRLQQLHREMTEL 178 Query: 185 APFVVSEYREKLRQRLTLLNDGTFPFEEHKFGMEMAIFADRCNIDEELTRLYSHFEQCKA 244 AP V +EYR++LRQR+ L+DG+ +EH FGME+A+FA+R N+DEEL RL+SH EQC+ Sbjct: 179 APEVPAEYRKRLRQRIESLDDGSLAVDEHIFGMEVALFAERSNVDEELIRLHSHLEQCRE 238 Query: 245 VLTSSEPAGRKLDFLVQEMNRETNTIGSKCNHLTLVNLTLDMKAELEKIREQAANLE 301 +L P GRKLDFL+QEMNRE NTIGSK NHLTLVN ++MKAELEKIREQAAN+E Sbjct: 239 LLLQKSPVGRKLDFLIQEMNREVNTIGSKANHLTLVNRVVEMKAELEKIREQAANVE 295 >A8MH78.1 A8MH78_ALKOO Putative uncharacterized protein Length = 293 Score = 232 bits (591), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 120/295 (40%), Positives = 185/295 (62%), Gaps = 7/295 (2%) Query: 9 SMTGYGQSSLQFCGYKITFEVKSVNNRYCEVVLRMPRDWTVYEDMLRRQVQAHIKRGRVD 68 SMTG+G+ Q E+KSVN+RY +V ++MP+ +T E+ +R+ +++HI+RGR++ Sbjct: 4 SMTGFGRGDSQVLDKSFQVELKSVNHRYMDVSIKMPKKFTYLEENIRKVIKSHIQRGRIE 63 Query: 69 VIINREHADEADSAQVLNRSAVRSYLKSAQQLREEFGITGELQLRDILALPGVM--ELKE 126 V I E+ E+D++ ++ + YLK+ +L EE I ++ I P V+ E KE Sbjct: 64 VYITYENIGESDTSISVDMPLAKEYLKAFMKLEEELSIENDVTTSMIARFPDVIRIEKKE 123 Query: 127 DVQALASSQDLKDTLELGLHQSLEALMDMRAREGGFLAADLLGRLNHLEELHAEMAVLAP 186 D + ++ +LE L+ +L+ L+ MRA EG L DLL RLN ++ A++ +P Sbjct: 124 D-----NEDEIWKSLEEALNGALKQLVAMRAEEGNKLELDLLKRLNKTKDFLAKVKERSP 178 Query: 187 FVVSEYREKLRQRLTLLNDGTFPFEEHKFGMEMAIFADRCNIDEELTRLYSHFEQCKAVL 246 ++ EYR+KL R+ + + F ++ + E+A+FADR NI EE+ RLYSH +Q K L Sbjct: 179 MIIQEYRQKLNDRIKEMLNEEFSLDDSRIATEVALFADRSNITEEIVRLYSHIDQFKNTL 238 Query: 247 TSSEPAGRKLDFLVQEMNRETNTIGSKCNHLTLVNLTLDMKAELEKIREQAANLE 301 + GRKLDFL+QEMNRE NTIGSK N L L NL +++K+E+EK+REQ N+E Sbjct: 239 EEDDSVGRKLDFLLQEMNREANTIGSKANDLILANLVINIKSEIEKMREQIQNIE 293 >A4J572.1 A4J572_DESRM Putative uncharacterized protein Length = 292 Score = 229 bits (583), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 118/294 (40%), Positives = 179/294 (60%), Gaps = 6/294 (2%) Query: 9 SMTGYGQSSLQFCGYKITFEVKSVNNRYCEVVLRMPRDWTVYEDMLRRQVQAHIKRGRVD 68 SMTGYG+ G + T E+KSVNNR+CEV+LR PR + ED ++R +Q + RGRVD Sbjct: 4 SMTGYGRGEASAEGRRFTVELKSVNNRFCEVILRQPRSLSPVEDRIKRTIQGKVTRGRVD 63 Query: 69 VIINREHADEADSAQVLNRSAVRSYLKSAQQLREEFGITGELQLRDILALPGVMELKEDV 128 I+ E E + ++++ +Y + ++L E + ++ ++D+++LP V+ L++ Sbjct: 64 GYISIEETGEITPSVKVDKALAVAYHNAMEELAESLSMAEKISIKDLISLPNVISLEQPE 123 Query: 129 QALASSQDLKDTLELGLHQSLEALMDMRAREGGFLAADLLGRLNHLEELHAEMAVLAPFV 188 + + + ++ +Q+L L+ MR EG L D+ R +++L +++ AP V Sbjct: 124 ENI---EQWYPAIKEATNQALNGLLTMRQTEGERLKIDISSRATVIQQLTVQISERAPLV 180 Query: 189 VSEYREKLRQRLT-LLNDGTFPFEEHKFGMEMAIFADRCNIDEELTRLYSHFEQCKAVLT 247 + EYR+KL QRL L +G EE + E+A+FADR +I EE+ RL SH Q +L+ Sbjct: 181 IQEYRDKLSQRLAEWLENGII--EEARLAAEVAVFADRADISEEIVRLNSHLVQLSQILS 238 Query: 248 SSEPAGRKLDFLVQEMNRETNTIGSKCNHLTLVNLTLDMKAELEKIREQAANLE 301 P GRKLDFLVQEMNRE NTIGSK N L + N ++ K+ELEKIREQ N+E Sbjct: 239 EGGPVGRKLDFLVQEMNREINTIGSKANDLVITNAVVNAKSELEKIREQVQNIE 292 >B4BEJ0.1 B4BEJ0_CLOTM Putative uncharacterized protein Length = 294 Score = 224 bits (571), Expect = 8e-57, Method: Compositional matrix adjust. Identities = 117/295 (39%), Positives = 183/295 (62%), Gaps = 6/295 (2%) Query: 9 SMTGYGQSSLQFCGYKITFEVKSVNNRYCEVVLRMPRDWTVYEDMLRRQVQAHIKRGRVD 68 SMTG+G+ Q G + E+K+VN+RYC++ +++PR + ED +R + I RG+VD Sbjct: 4 SMTGFGRGRAQADGREFLVEIKTVNHRYCDIYIKLPRQISFLEDKVREVIGKSISRGKVD 63 Query: 69 VIINREHADEADSAQVLNRSAVRSYLKSAQQLREEFGITGELQLRDILALPGVMELKEDV 128 V IN E E +++ ++Y+KS + LR+++G+ ++ + I P +++++ Sbjct: 64 VFINYEDFSEDSKNILIDEGLAKTYIKSVEYLRDKYGLKDDISVSLIAKFPDILKVE--- 120 Query: 129 QALASSQDLKDTLELGLHQSLEALMDMRAREGGFLAADLLGRLNHLEELHAEMAVLAPFV 188 + + + + L L +L++L+ MR EG L DLL R + +E++ E+++ AP V Sbjct: 121 KPEEDEEKIWNLLYEALSHALDSLISMRETEGEGLKNDLLERTDAIEKVVQEISIRAPEV 180 Query: 189 VSEYREKLRQRLTLLNDGTFPFEEHKFGMEMAIFADRCNIDEELTRLYSHFEQCKAVLTS 248 V EY+ KL R+ + + +E++ ME+AIFADRCNIDEEL RL SH Q + L S Sbjct: 181 VKEYKCKLENRIKEILEQQV-IDENRLAMEVAIFADRCNIDEELVRLESHINQLRQTLNS 239 Query: 249 SE--PAGRKLDFLVQEMNRETNTIGSKCNHLTLVNLTLDMKAELEKIREQAANLE 301 P GRKLDFL+QEMNRE NTIGSK N L++ +++K+ELEKIREQ N+E Sbjct: 240 DSDTPVGRKLDFLIQEMNREINTIGSKANDLSITQSVVEIKSELEKIREQIQNIE 294 >A3DF20.1 A3DF20_CLOTH Putative uncharacterized protein Length = 294 Score = 223 bits (569), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 117/295 (39%), Positives = 183/295 (62%), Gaps = 6/295 (2%) Query: 9 SMTGYGQSSLQFCGYKITFEVKSVNNRYCEVVLRMPRDWTVYEDMLRRQVQAHIKRGRVD 68 SMTG+G+ Q G + E+K+VN+RYC++ +++PR + ED +R + I RG+VD Sbjct: 4 SMTGFGRGRAQADGREFLVEIKTVNHRYCDIYIKLPRQISFLEDKVREVIGKSISRGKVD 63 Query: 69 VIINREHADEADSAQVLNRSAVRSYLKSAQQLREEFGITGELQLRDILALPGVMELKEDV 128 V IN E E +++ ++Y+KS + LR+++G+ ++ + I P +++++ Sbjct: 64 VFINYEDFSEDSKNILIDEGLAKTYIKSVEYLRDKYGLKDDISVSLIAKFPDILKVE--- 120 Query: 129 QALASSQDLKDTLELGLHQSLEALMDMRAREGGFLAADLLGRLNHLEELHAEMAVLAPFV 188 + + + + L L +L++L+ MR EG L DLL R + +E++ E+++ AP V Sbjct: 121 KPEEDEEKIWNLLYEALSHALDSLISMRETEGEGLKNDLLERTDAIEKVVQEISIRAPEV 180 Query: 189 VSEYREKLRQRLTLLNDGTFPFEEHKFGMEMAIFADRCNIDEELTRLYSHFEQCKAVLTS 248 V EY+ KL R+ + + +E++ ME+AIFADRCNIDEEL RL SH Q + L S Sbjct: 181 VKEYKCKLENRIKEILEQQV-IDENRLAMEVAIFADRCNIDEELVRLESHINQLRQTLNS 239 Query: 249 SE--PAGRKLDFLVQEMNRETNTIGSKCNHLTLVNLTLDMKAELEKIREQAANLE 301 P GRKLDFL+QEMNRE NTIGSK N L++ +++K+ELEKIREQ N+E Sbjct: 240 DSDTPVGRKLDFLIQEMNREINTIGSKANDLSITQNVVEIKSELEKIREQIQNIE 294 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.320 0.135 0.377 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,570,409,271 Number of extensions: 59523084 Number of successful extensions: 162409 Number of sequences better than 1.0e-05: 942 Number of HSP's gapped: 160627 Number of HSP's successfully gapped: 943 Length of query: 301 Length of database: 3,060,696,203 Length adjustment: 135 Effective length of query: 166 Effective length of database: 1,788,859,178 Effective search space: 296950623548 Effective search space used: 296950623548 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 131 (55.1 bits)