BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0490.0049.p
         (86 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B3KJ26.1 B3KJ26_9BACI Putative uncharacterized protein                171   2e-41
B1DHM6.1 B1DHM6_9BACL Putative uncharacterized protein                170   4e-41
C0ZG03.1 Y3735_BREBN UPF0296 protein BBR47_37350                      159   7e-38
B1BAW3.1 B1BAW3_CLOBO Putative uncharacterized protein                155   1e-36
A0Q121.1 Y2250_CLONN UPF0296 protein NT01CX_2250                      155   1e-36

>B3KJ26.1 B3KJ26_9BACI Putative uncharacterized protein
          Length = 86

 Score =  171 bits (433), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 86/86 (100%), Positives = 86/86 (100%)

Query: 1  MAIKLINIGFGNIVSANRIISIVSPESAPIKRIIQEARDRHMLIDATYGRRTRAVIITDS 60
          MAIKLINIGFGNIVSANRIISIVSPESAPIKRIIQEARDRHMLIDATYGRRTRAVIITDS
Sbjct: 1  MAIKLINIGFGNIVSANRIISIVSPESAPIKRIIQEARDRHMLIDATYGRRTRAVIITDS 60

Query: 61 DHVILSAVQPETVAHRLSSKDDDNDE 86
          DHVILSAVQPETVAHRLSSKDDDNDE
Sbjct: 61 DHVILSAVQPETVAHRLSSKDDDNDE 86


>B1DHM6.1 B1DHM6_9BACL Putative uncharacterized protein
          Length = 86

 Score =  170 bits (430), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 85/86 (98%), Positives = 86/86 (100%)

Query: 1  MAIKLINIGFGNIVSANRIISIVSPESAPIKRIIQEARDRHMLIDATYGRRTRAVIITDS 60
          MAIKLINIGFGNIVSANRIISIVSPESAPIKRIIQEARDRHMLIDATYGRRTRAVIITDS
Sbjct: 1  MAIKLINIGFGNIVSANRIISIVSPESAPIKRIIQEARDRHMLIDATYGRRTRAVIITDS 60

Query: 61 DHVILSAVQPETVAHRLSSKDDDNDE 86
          DHVILSAVQPETVAHRLS+KDDDNDE
Sbjct: 61 DHVILSAVQPETVAHRLSTKDDDNDE 86


>C0ZG03.1 Y3735_BREBN UPF0296 protein BBR47_37350
          Length = 86

 Score =  159 bits (402), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 78/86 (90%), Positives = 85/86 (98%)

Query: 1  MAIKLINIGFGNIVSANRIISIVSPESAPIKRIIQEARDRHMLIDATYGRRTRAVIITDS 60
          MAIKLINIGFGNIV+ANRIISIVSPESAPIKRIIQEARDR+ML+DATYGRRTRAVIITDS
Sbjct: 1  MAIKLINIGFGNIVNANRIISIVSPESAPIKRIIQEARDRNMLVDATYGRRTRAVIITDS 60

Query: 61 DHVILSAVQPETVAHRLSSKDDDNDE 86
          DHVILSAVQPETVA RL++KDD++DE
Sbjct: 61 DHVILSAVQPETVAQRLTTKDDESDE 86


>B1BAW3.1 B1BAW3_CLOBO Putative uncharacterized protein
          Length = 90

 Score =  155 bits (392), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 77/84 (91%), Positives = 82/84 (97%)

Query: 1  MAIKLINIGFGNIVSANRIISIVSPESAPIKRIIQEARDRHMLIDATYGRRTRAVIITDS 60
          M+IKLINIGFGNIVSANR+++IVSPESAPIKRIIQEARDR MLIDATYGRRTRAVIITDS
Sbjct: 1  MSIKLINIGFGNIVSANRLVAIVSPESAPIKRIIQEARDRGMLIDATYGRRTRAVIITDS 60

Query: 61 DHVILSAVQPETVAHRLSSKDDDN 84
          DHVILSAVQPETVAHRLSSKD+ N
Sbjct: 61 DHVILSAVQPETVAHRLSSKDEVN 84


>A0Q121.1 Y2250_CLONN UPF0296 protein NT01CX_2250
          Length = 90

 Score =  155 bits (392), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 77/84 (91%), Positives = 82/84 (97%)

Query: 1  MAIKLINIGFGNIVSANRIISIVSPESAPIKRIIQEARDRHMLIDATYGRRTRAVIITDS 60
          M+IKLINIGFGNIVSANR+++IVSPESAPIKRIIQEARDR MLIDATYGRRTRAVIITDS
Sbjct: 1  MSIKLINIGFGNIVSANRLVAIVSPESAPIKRIIQEARDRGMLIDATYGRRTRAVIITDS 60

Query: 61 DHVILSAVQPETVAHRLSSKDDDN 84
          DHVILSAVQPETVAHRLSSKD+ N
Sbjct: 61 DHVILSAVQPETVAHRLSSKDEVN 84


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.319    0.134    0.363 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 444,446,425
Number of extensions: 13331372
Number of successful extensions: 34990
Number of sequences better than 1.0e-05: 245
Number of HSP's gapped: 34990
Number of HSP's successfully gapped: 245
Length of query: 86
Length of database: 3,060,696,203
Length adjustment: 56
Effective length of query: 30
Effective length of database: 2,533,119,363
Effective search space: 75993580890
Effective search space used: 75993580890
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 125 (52.8 bits)