BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0490.0039.p (258 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KJ35.1 B3KJ35_9BACI Protein phosphatase 2C-like protein 285 4e-75 A7Z4J6.1 A7Z4J6_BACA2 PrpC 183 1e-44 B4AE45.1 B4AE45_BACPU Protein phosphatase PrpC EC=3.1.3.16 181 8e-44 A8FD41.1 A8FD41_BACP2 Serine/threonine phosphatase 180 1e-43 Q65JS2.1 Q65JS2_BACLD PrpC 178 5e-43 >B3KJ35.1 B3KJ35_9BACI Protein phosphatase 2C-like protein Length = 258 Score = 285 bits (728), Expect = 4e-75, Method: Compositional matrix adjust. Identities = 141/257 (54%), Positives = 185/257 (71%) Query: 1 LIRTVHASDVGRVRTVNEDSVWIGVTQNGYTLGIIADGMGGHLAGDTASRLALETMKNAL 60 +I+TVH S VGRVR VNEDSV++ ++GYTLG++ADGMGGHLAGDTASRLA++T+ L Sbjct: 1 MIKTVHVSHVGRVRPVNEDSVFVSTLEHGYTLGVVADGMGGHLAGDTASRLAVDTVAADL 60 Query: 61 YGLQPDLPEEELQHALSAAIYEANHTVHNEASSDEKYHNMGTTVVAVLLKGEAGYIGHIG 120 L+ D+ + ++ AL AI AN ++ EAS+DE+ HNMGTT+VAVLL+G GYIGHIG Sbjct: 61 SSLEQDMSMDGVRAALGDAILHANAVIYQEASADERLHNMGTTIVAVLLRGSEGYIGHIG 120 Query: 121 DSRAYLIKDGAAVQLTEDHTLVNELFKNGQISLEELDNHPRRNVLTRALGTDAEVTADLA 180 DSRAY + G ++LT+DHTLVNELFK+GQI+ ++L+ HPR+NVL+RALGTD +VT +L Sbjct: 121 DSRAYKVVPGQVIRLTDDHTLVNELFKSGQITEDQLETHPRKNVLSRALGTDVDVTVELT 180 Query: 181 PVRLEPGELLLLCSDGLSNFVSQEHLGKVAGIQEISXXXXXXXXXXXXXXXXXXXNISVA 240 PV L GE+LLLCSDGLSN VS+E +G+++G ++ NI+VA Sbjct: 181 PVTLGEGEVLLLCSDGLSNRVSRELIGQISGSLDLPLEERADRLLQLALLAGGEDNITVA 240 Query: 241 MLEHQGEAAVPETKEWD 257 M EHQ E K WD Sbjct: 241 MFEHQEEVVGQRIKGWD 257 >A7Z4J6.1 A7Z4J6_BACA2 PrpC Length = 256 Score = 183 bits (465), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 98/208 (47%), Positives = 132/208 (63%), Gaps = 4/208 (1%) Query: 4 TVHASDVGRVRTVNEDSVWIGVTQNGYTLGIIADGMGGHLAGDTASRLALETMKNALYGL 63 T +D G+VR NED+ I T+ L ++ADGMGGHLAGD ASR+A+ M+ Sbjct: 6 TALKTDTGKVRRHNEDAAGI-FTKEDAVLAVVADGMGGHLAGDVASRMAVAAMEEQWNRT 64 Query: 64 Q--PDLPEEELQHALSAAIYEANHTVHNEASSDEKYHNMGTTVVAVLLKGEAGYIGHIGD 121 + P LP + L I+EAN VH+ A ++E+ MGTTVV L G+ + HIGD Sbjct: 65 ETVPSLPSA-CEDWLKDRIHEANVKVHDHAKANEECRGMGTTVVCALFTGKFVTVAHIGD 123 Query: 122 SRAYLIKDGAAVQLTEDHTLVNELFKNGQISLEELDNHPRRNVLTRALGTDAEVTADLAP 181 SR YL+++G QLTEDH+LVNEL K G+IS E+ ++HPR+NVLTRALGTD ++ D Sbjct: 124 SRCYLLQEGEFTQLTEDHSLVNELVKTGEISKEDAEHHPRKNVLTRALGTDETISPDARS 183 Query: 182 VRLEPGELLLLCSDGLSNFVSQEHLGKV 209 L G+ LLLCSDGLSN + + ++ Sbjct: 184 FELSDGDQLLLCSDGLSNKIEDHEIKQM 211 >B4AE45.1 B4AE45_BACPU Protein phosphatase PrpC EC=3.1.3.16 Length = 255 Score = 181 bits (458), Expect = 8e-44, Method: Compositional matrix adjust. Identities = 94/208 (45%), Positives = 134/208 (64%), Gaps = 3/208 (1%) Query: 1 LIRTVHASDVGRVRTVNEDSVWIGVTQNGYTLGIIADGMGGHLAGDTASRLALETMKNAL 60 +IR +D G+VR NED I + L ++ADGMGGHLAGD AS++A+ ++K Sbjct: 1 MIRAAFLTDTGKVRQHNEDDAGIFEAKEDSLLAVVADGMGGHLAGDVASKMAVSSLKE-Y 59 Query: 61 YGLQPDLPEE--ELQHALSAAIYEANHTVHNEASSDEKYHNMGTTVVAVLLKGEAGYIGH 118 + +PE+ + + L + I + N V+ A ++E+ MGTT+V L+ + I H Sbjct: 60 WEETSSIPEKPADQESWLISKISDINDQVYEHAQNNEECQGMGTTIVCALVHLQTVTIAH 119 Query: 119 IGDSRAYLIKDGAAVQLTEDHTLVNELFKNGQISLEELDNHPRRNVLTRALGTDAEVTAD 178 IGDSR YL+++GA QLTEDH+LVNEL K G+IS + + HPR+NVLT+ALGTD V D Sbjct: 120 IGDSRCYLLREGALTQLTEDHSLVNELVKTGEISKADAEYHPRKNVLTKALGTDKRVQID 179 Query: 179 LAPVRLEPGELLLLCSDGLSNFVSQEHL 206 ++PG+ +LLCSDGLSN V +E+L Sbjct: 180 ARTFEVDPGDQILLCSDGLSNKVEEENL 207 >A8FD41.1 A8FD41_BACP2 Serine/threonine phosphatase Length = 256 Score = 180 bits (456), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 94/208 (45%), Positives = 134/208 (64%), Gaps = 3/208 (1%) Query: 1 LIRTVHASDVGRVRTVNEDSVWIGVTQNGYTLGIIADGMGGHLAGDTASRLALETMKNAL 60 LIR +D G+VR NED I + L ++ADGMGGHLAGD AS++A+ ++K Sbjct: 2 LIRAAFLTDTGKVRQHNEDDAGIFEAKEDSLLAVVADGMGGHLAGDVASKMAVSSLKE-Y 60 Query: 61 YGLQPDLPEE--ELQHALSAAIYEANHTVHNEASSDEKYHNMGTTVVAVLLKGEAGYIGH 118 + +PE+ + + L + I + N V+ A ++E+ MGTT+V L+ + I H Sbjct: 61 WEETSSIPEKPADQESWLISKISDINDQVYEHAQNNEECQGMGTTIVCALVHLQTVTIAH 120 Query: 119 IGDSRAYLIKDGAAVQLTEDHTLVNELFKNGQISLEELDNHPRRNVLTRALGTDAEVTAD 178 IGDSR YL+++GA QLT+DH+LVNEL K G+IS + + HPR+NVLT+ALGTD V D Sbjct: 121 IGDSRCYLLREGALTQLTDDHSLVNELVKTGEISKADAEYHPRKNVLTKALGTDKRVQID 180 Query: 179 LAPVRLEPGELLLLCSDGLSNFVSQEHL 206 ++PG+ +LLCSDGLSN V +E+L Sbjct: 181 ARTFEVDPGDQILLCSDGLSNKVEEENL 208 >Q65JS2.1 Q65JS2_BACLD PrpC Length = 254 Score = 178 bits (451), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 92/207 (44%), Positives = 130/207 (62%), Gaps = 3/207 (1%) Query: 2 IRTVHASDVGRVRTVNEDSVWIGVTQNGYTLGIIADGMGGHLAGDTASRLALETMKNALY 61 ++T +D G++R NED I +NG L ++ DGMGGHLAGD ASR+A+ +++ Sbjct: 1 MKTALKTDRGKIRQHNEDDAGIFTEKNGLVLAVVCDGMGGHLAGDVASRMAVSALRDIWE 60 Query: 62 GLQ--PDLPEEELQHALSAAIYEANHTVHNEASSDEKYHNMGTTVVAVLLKGEAGYIGHI 119 + P P E + L I N + + + + E+ MGTTVV L G+ + HI Sbjct: 61 ETEEVPASPAES-EAWLKEQISAVNQKLFDHSRAHEECQGMGTTVVCALYTGKTLTVAHI 119 Query: 120 GDSRAYLIKDGAAVQLTEDHTLVNELFKNGQISLEELDNHPRRNVLTRALGTDAEVTADL 179 GDSR YL++ G+ +QLTEDH+LVNEL + G IS E+ ++HPR+NVLT+ALGTD EV + Sbjct: 120 GDSRCYLLQGGSFIQLTEDHSLVNELVRTGGISKEDAEHHPRKNVLTKALGTDPEVKVEA 179 Query: 180 APVRLEPGELLLLCSDGLSNFVSQEHL 206 +EPG+ +LLCSDGL+N V E L Sbjct: 180 HTFEIEPGDQVLLCSDGLTNKVDDETL 206 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.314 0.132 0.373 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,430,651,248 Number of extensions: 54410841 Number of successful extensions: 125270 Number of sequences better than 1.0e-05: 1276 Number of HSP's gapped: 123365 Number of HSP's successfully gapped: 1276 Length of query: 258 Length of database: 3,060,696,203 Length adjustment: 133 Effective length of query: 125 Effective length of database: 1,807,701,208 Effective search space: 225962651000 Effective search space used: 225962651000 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 130 (54.7 bits)