BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0490.0038.p (743 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KJ36.1 B3KJ36_9BACI Protein kinase 758 0.0 B1DHL0.1 B1DHL0_9BACL Serine/threonine protein kinase with PASTA... 615 e-174 C0ZFZ3.1 C0ZFZ3_BREBN Serine/threonine-protein kinase EC=2.7.11.1 511 e-142 Q2RK10.1 Q2RK10_MOOTA Serine/threonine protein kinase 419 e-115 Q65JS1.1 Q65JS1_BACLD Protein kinase PrkC 417 e-114 >B3KJ36.1 B3KJ36_9BACI Protein kinase Length = 712 Score = 758 bits (1957), Expect = 0.0, Method: Compositional matrix adjust. Identities = 395/670 (58%), Positives = 477/670 (71%), Gaps = 7/670 (1%) Query: 1 MIGHELGGRYQVIERIGGGGMALVYRAHDILLNRNVAIKVLRNQFVHDEEFIRRFRREAQ 60 MIGHEL GRY++IERIGGGGMALVY+A DILLNRNVAIKVLR QFVHDEEFIRRFRREAQ Sbjct: 1 MIGHELAGRYKIIERIGGGGMALVYKAQDILLNRNVAIKVLRQQFVHDEEFIRRFRREAQ 60 Query: 61 SAASLSHPNVVSIYDVGQEDEIHYIVMEYVEGKNLNEIIKERAPLQVDEAVRIASQICDA 120 SAASLSH NVVSIYDVGQE+++HYIVMEY+EG+NLNEIIKERAPLQV+EAVRIA+QICDA Sbjct: 61 SAASLSHSNVVSIYDVGQEEDVHYIVMEYIEGQNLNEIIKERAPLQVEEAVRIATQICDA 120 Query: 121 LDHAHQNQIIHRDIKPHNILIGRNGRVKVTDFGIARAVTSTTITQTGSVVGSVHYFSPEH 180 L HAH NQIIHRDIKPHNILIGRNGRVKVTDFGIARAVTSTTITQTGSVVGSVHYFSPEH Sbjct: 121 LGHAHHNQIIHRDIKPHNILIGRNGRVKVTDFGIARAVTSTTITQTGSVVGSVHYFSPEH 180 Query: 181 AKGVTTGEKSDLYSLGIVLYQMLTGVLPFLGESPISVALKHLQEEFEEPRLLNPLIPQSV 240 AKGV TGEKSDLYSLGIVLYQMLT LPFLGESPISVALKHLQEEF+EPR +NPLIPQSV Sbjct: 181 AKGVVTGEKSDLYSLGIVLYQMLTARLPFLGESPISVALKHLQEEFDEPREVNPLIPQSV 240 Query: 241 ENVILRSMRKNPEERYQSAKEMLQDLETCLLPERRSESKTQFHDEEDEDRTRIIPAIRPM 300 EN+IL+SMRKNPEERYQSA+EM+ DLETCL+P R +E K +F D D D T ++PA++ M Sbjct: 241 ENIILKSMRKNPEERYQSAEEMMDDLETCLMPMRLNEPKMEFED--DADSTLVMPALKTM 298 Query: 301 QRGLXXXXXXXXXXXXXXXXXXXXXPGKRKSGRAVLWISLTLLVLIAMGGVVWYVNAKLA 360 QR K+K + + I LL L M GVV YVN L Sbjct: 299 QRSSQHHHDQDDDSDDDEFEEKPTGKPKKKWVKPTIIIGSVLLFLGLMLGVVMYVNNMLE 358 Query: 361 VDEVAVPKVTGLSFEAAKAELAKVGLVADEPPAGEYNANFEPDVVLKQSKEPDTMVKEDT 420 V EV VP V G++ E A EL GL +E EY N + VV Q KEP+TM+K+ + Sbjct: 359 VPEVKVPPVVGMTEEEAIRELEAQGLTVNEEVIREYKPNVDEGVVFAQDKEPETMLKKGS 418 Query: 421 HIALTVNIPKPLSKMIPLAGKTEEEAIKLLIAEGVDQSRITPDQRYSEDFPEGQVIGTEP 480 + L+V KPL +M L G T +EA+ L GV ++ I +++ P+G++ P Sbjct: 419 PVQLSVGDAKPLPEMPDLNGMTFDEAVAALKEIGVKETSIKRSSEKNDEVPQGKIFKQSP 478 Query: 481 AVDSEYDPATATIKLIVSQGKETADVPDLTNKPQAEAKSLLEAAGLVLGXXXXXXXXXXX 540 ++ DP T I + VS+GK +P + Q A ++LE+ G + Sbjct: 479 EASTKIDPETEVISVTVSEGKNLVPMPGVVGLEQENAVNILESNGFKIAAIKERSSFEVK 538 Query: 541 XGIVMEQWPYEKGDTASPGEKINITVSKGYPPEALEYTFNVPVAPSVEGTKTKIRIIYAD 600 GIV+EQWP+E +PG I + VS GYP +ALEY ++VPV+PS EG ++KIR++++D Sbjct: 539 KGIVIEQWPHEANQQVAPGSDITLFVSSGYPSDALEYNYSVPVSPSAEGQESKIRVVFSD 598 Query: 601 ARKDGENQEWGTRTIAKSQRLAVKLLLAPNKDGSVSVYQDGDFVATYSIKYADAKNGTVP 660 A G+NQE +TI S+ + VKLLLAP+K +V +++DG V TYS+ Y D KNGTVP Sbjct: 599 AL--GDNQEAVNKTITTSEMVPVKLLLAPDKHATVMIFRDGRQVDTYSVSYTDVKNGTVP 656 Query: 661 DP---EPPVQ 667 P +PP Q Sbjct: 657 QPTFEQPPEQ 666 >B1DHL0.1 B1DHL0_9BACL Serine/threonine protein kinase with PASTA sensor(S) Length = 582 Score = 615 bits (1586), Expect = e-174, Method: Compositional matrix adjust. Identities = 327/551 (59%), Positives = 385/551 (69%), Gaps = 27/551 (4%) Query: 1 MIGHELGGRYQVIERIGGGGMALVYRAHDILLNRNVAIKVLRNQFVHDEEFIRRFRREAQ 60 MIGH+LGGRY+++ RIGGGGMALVY+AHDILLNRNVA+K+LR QFVHDEEFIRRFRREAQ Sbjct: 1 MIGHQLGGRYEILTRIGGGGMALVYKAHDILLNRNVAVKILRQQFVHDEEFIRRFRREAQ 60 Query: 61 SAASLSHPNVVSIYDVGQEDEIHYIVMEYVEGKNLNEIIKERAPLQVDEAVRIASQICDA 120 SAASLSHPNVVSIYDVGQE++ HYIVMEY+EG NLNEII ERAPLQ DEAVRIA QICDA Sbjct: 61 SAASLSHPNVVSIYDVGQEEDTHYIVMEYIEGHNLNEIIHERAPLQADEAVRIAVQICDA 120 Query: 121 LDHAHQNQIIHRDIKPHNILIGRNGRVKVTDFGIARAVTSTTITQTGSVVGSVHYFSPEH 180 L+HAHQN IIHRDIKPHNILIG+NGRVKVTDFGIARAVTS+TITQTGSVVGSVHYFSPEH Sbjct: 121 LEHAHQNHIIHRDIKPHNILIGKNGRVKVTDFGIARAVTSSTITQTGSVVGSVHYFSPEH 180 Query: 181 AKGVTTGEKSDLYSLGIVLYQMLTGVLPFLGESPISVALKHLQEEFEEPRLLNPLIPQSV 240 AKG++TGEKSDLYSLGIVLYQMLTG LPF GESPISVALKHLQEEFEEPR +NP IPQSV Sbjct: 181 AKGISTGEKSDLYSLGIVLYQMLTGKLPFFGESPISVALKHLQEEFEEPRKVNPHIPQSV 240 Query: 241 ENVILRSMRKNPEERYQSAKEMLQDLETCLLPERRSESKTQFHDEEDEDRTRIIPAIR-- 298 ENVILR+MRKNP ERYQSA+EML DL+TCL P R SE K F D D TR++PAIR Sbjct: 241 ENVILRAMRKNPNERYQSAREMLNDLDTCLKPSRLSEPKATFTSGSDLDETRVMPAIRGD 300 Query: 299 ---------------------PMQRGLXXXXXXXXXXXXXXXXXXXXXPGKRKSGRAVLW 337 P++R P K ++ Sbjct: 301 MLASAQQYELTPVPPPVEASAPLERANKAAAASSQPEAEWKDEKASGKPKGWKRPTTIVA 360 Query: 338 ISLTLLVLIAMGGVVWYVNAKLAVDEVAVPKVTGLSFEAAKAELAKVGLVADEPPAGEYN 397 ++L +L LI G + + KL V EV VP V G + A+A L + GL EP E+ Sbjct: 361 VTLVILGLIIWG--FFALLNKLDVPEVDVPFVVGKQEDVARAMLEEKGLRVKEPVIHEFM 418 Query: 398 ANFEPDVVLKQSKEPDTMVKEDTHIALTVNIPKPLSKMIPLAGKTEEEAIKLLIAEGVDQ 457 + V Q K + VKE + I L+V+ L K+ GK +EA LIA GV Sbjct: 419 GDVPAGQVFAQDK-ANMRVKEGSWIQLSVSDGAVLEKITDYKGKQLQEAKDDLIALGVPD 477 Query: 458 SRITPDQRYSEDFPEGQVIGTEPAVDSEYDPATATIKLIVSQGKETADVPDLTNKPQAEA 517 +I+ +Q +S+ P G +I P SE+DP TAT+K +VS+G+ET +P+L AEA Sbjct: 478 DQISAEQVFSDQDP-GTIISQTPEFGSEFDPKTATVKFMVSKGRETIPMPNLIGHTVAEA 536 Query: 518 KSLLEAAGLVL 528 K ++++ GLVL Sbjct: 537 KDIVKSNGLVL 547 >C0ZFZ3.1 C0ZFZ3_BREBN Serine/threonine-protein kinase EC=2.7.11.1 Length = 661 Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust. Identities = 300/652 (46%), Positives = 394/652 (60%), Gaps = 28/652 (4%) Query: 1 MIGHELGGRYQVIERIGGGGMALVYRAHDILLNRNVAIKVLRNQFVHDEEFIRRFRREAQ 60 M G LGGRYQ+ R+GGGGMA+VY+A D++LNR VA+KVLR+QF DE+F+ RFRREAQ Sbjct: 1 MEGQRLGGRYQIESRVGGGGMAIVYKAKDLILNRPVAVKVLRSQFGTDEDFVNRFRREAQ 60 Query: 61 SAASLSHPNVVSIYDVGQEDEIHYIVMEYVEGKNLNEIIKERAPLQVDEAVRIASQICDA 120 + ASLSHPNVV +YDVGQ+ + HY+VMEY+EG L E+I +R L V+EAVRIA QICDA Sbjct: 61 AVASLSHPNVVGVYDVGQDGDTHYMVMEYIEGYTLKEVIIQRGALPVEEAVRIAEQICDA 120 Query: 121 LDHAHQNQIIHRDIKPHNILIGRNGRVKVTDFGIARAVTSTTITQTGSVVGSVHYFSPEH 180 LDHAHQNQIIHRDIKPHNI+IG+NGRVKVTDFGIARAVTS TIT T +++GSVHYFSPE Sbjct: 121 LDHAHQNQIIHRDIKPHNIMIGKNGRVKVTDFGIARAVTSATITHTNAMLGSVHYFSPEQ 180 Query: 181 AKGVTTGEKSDLYSLGIVLYQMLTGVLPFLGESPISVALKHLQEEFEEPRLLNPLIPQSV 240 A+G TGEKSD+YSLGIVLY+M+TG LPF G+SPISVALKHLQE EPR +NP IPQSV Sbjct: 181 ARGGITGEKSDIYSLGIVLYEMVTGELPFSGDSPISVALKHLQEPLPEPRQVNPAIPQSV 240 Query: 241 ENVILRSMRKNPEERYQSAKEMLQDLETCLLPERRSESKTQFHDEEDEDRTRIIPAIRP- 299 ENVIL+++ K+P RY SA EML+DLETCL PER +E K F DE+ TR++P I P Sbjct: 241 ENVILKALVKDPFLRYASASEMLEDLETCLFPERLNEEKLTF--PVDEEMTRVVPIITPD 298 Query: 300 MQRGLXXXXX--XXXXXXXXXXXXXXXXPGKRKSG-RAVLWI-SLTLLVLIAMGGVVWYV 355 M G P K++ +A+ W+ + L ++A G + Sbjct: 299 MLEGHTNGKTGGAGRSRYEQRAEEEDAKPAKKQWWVKALFWVGGIGLFFVLAFFGFNLLL 358 Query: 356 NAKLAVDEVAVPKVTGLSFEAAKAELAKVGLVADEPPAGEYNANFEPDVVLKQSKEPDTM 415 N +V E VP V G+ A+ ++ LVA E N E +V++Q P Sbjct: 359 NLFPSVPEAQVPHVEGIEVTLAEKKIQDAKLVAR--IVEEANDTIEKGMVIRQDPAPPMR 416 Query: 416 VKEDTHIALTV-------NIPKPLSKMIPLAGKTEEEAIKLLIAEGVDQSRITPDQRYSE 468 +KE++ + L V N+P ++ L T EEA+K + G +T + + Sbjct: 417 LKENSVVTLFVSKGQQEINMP----NLVTLPRATAEEALK---SNGFKLENVTFVEEEDD 469 Query: 469 DFPEGQVIGTEPAVDSEYDPATATIKLIVSQGKETADVPDLTNKPQAEAKSLLEAAGLVL 528 G VI PA + + P + + +S+GK +PD+ NK A+ L GL + Sbjct: 470 KAEVGTVIKQSPAANEKVFPTKTNVTVTISKGKTFVKMPDVRNKSVEVAQVELFKKGLAV 529 Query: 529 GXXXXX-XXXXXXXGIVMEQWPYEKGDTASPGEKINITVSKGYPPEALEYTFNVPV-APS 586 G GIV+ PY+ G I + VS G P+ + NVPV Sbjct: 530 GKITEVPSYTTDKPGIVLSTHPYDPGMEVQKDVAIPLEVSNGQYPQDAKLA-NVPVYVEV 588 Query: 587 VEGTKTKIRIIYADARKDGENQEWGTRTIAKSQRLAVKLLLAPNKDGSVSVY 638 V G +++I DAR GE + + T TI +++ V ++LAP KD V V+ Sbjct: 589 VPGEPLEVKIEVTDAR--GEAKVFQTETITENKEYDVPIVLAPQKDSVVKVF 638 >Q2RK10.1 Q2RK10_MOOTA Serine/threonine protein kinase Length = 612 Score = 419 bits (1078), Expect = e-115, Method: Compositional matrix adjust. Identities = 262/655 (40%), Positives = 369/655 (56%), Gaps = 60/655 (9%) Query: 1 MIGHELGGRYQVIERIGGGGMALVYRAHDILLNRNVAIKVLRNQFVHDEEFIRRFRREAQ 60 MIG L GRY+++ +GGGGMA VYR D LLNRNV IK+LR Q+ D+EF+ RF+REAQ Sbjct: 1 MIGKVLEGRYEIVSELGGGGMARVYRGQDRLLNRNVTIKILREQYASDKEFLARFQREAQ 60 Query: 61 SAASLSHPNVVSIYDVGQEDEIHYIVMEYVEGKNLNEIIKERAPLQVDEAVRIASQICDA 120 + ASLSHPNVVSIYDVGQED++HY++MEYVEG++L ++I ERAPL EA+ I+ QICDA Sbjct: 61 AVASLSHPNVVSIYDVGQEDDLHYLIMEYVEGRSLKDLISERAPLPPLEAIDISLQICDA 120 Query: 121 LDHAHQNQIIHRDIKPHNILIGRNGRVKVTDFGIARAVTSTTITQTGSVVGSVHYFSPEH 180 L+HAH+N +IHRDIKPHNILI RNGRVKVTDFGIA+AV+ T++Q+G+++GSVHY +PE Sbjct: 121 LEHAHENGVIHRDIKPHNILITRNGRVKVTDFGIAQAVSEVTMSQSGTMIGSVHYLAPEQ 180 Query: 181 AKGVTTGEKSDLYSLGIVLYQMLTGVLPFLGESPISVALKHLQEEFEEPRLLNPLIPQSV 240 A+G G +D+YSLGIVLY+MLTG LPF GE+P++VALKHLQE R LNP +P ++ Sbjct: 181 ARGGVIGATADIYSLGIVLYEMLTGDLPFHGETPVAVALKHLQENPRPVRELNPNVPPAL 240 Query: 241 ENVILRSMRKNPEERYQSAKEMLQDLETCLLPERRSESKTQFHDEEDEDRTRIIPAIRPM 300 E V++R++ K+P RY SA + D LL R + + F T+++PAI Sbjct: 241 ERVVMRTLEKDPARRYPSAAALRSD----LLAVRNALADATFA-------TQVLPAIE-- 287 Query: 301 QRGLXXXXXXXXXXXXXXXXXXXXXPGKRKSGRAVLWISLTLLVLIAMGGVVWY-VNAKL 359 P R+ R W+ + LL L +W L Sbjct: 288 -----------------TPDPPSTLPKPRRRPRVWAWVLMALLFLGLAAAGLWAGFRYYL 330 Query: 360 AVDEVAVPKVTGLSFEAAKAELAKVGLVADEPPAGEYNANFEPDVVLKQSKEPDTMVKED 419 AV E VP V GL A +LA GL + A +Y+A+ V+ Q P+ V+ Sbjct: 331 AVGETLVPSVVGLPEGQALEQLAAAGLRG-QVIARQYDASVPAGQVMAQDPGPNQRVRRG 389 Query: 420 THIALTVNIPKPLSKMIPLAGKTEEEAIKLLIAEGVDQSRITPD--QRYSEDFPEGQVIG 477 +ALTV+ L ++ + G+TE A LI E + ++ D + Y P G V+ Sbjct: 390 RVVALTVSQGARLVRVPSVIGETERNA--RLILENAN-LKVAADTLKVYHPSIPAGSVVD 446 Query: 478 TEPAVDSEYDPATATIKLIVSQGKETADVPDLTNKPQ------AEAKSLLEAAGLVLGXX 531 P +++ P ++LI+S+G E P T P AEA+ L A L G Sbjct: 447 QNPPANTQ-QPEGTEVRLIISKGPE----PQFTTAPSVVGLSLAEAQQKLLEAKLKQGTL 501 Query: 532 XXXXXXXXXXGIVMEQWPYEKGDTASPGEKINITVSKGYPPEALEYTFNVPVAPSVEGTK 591 G ++ Q P E G G IN+ VS+G P ++ V + P+ + Sbjct: 502 TYQRSDNQFPGYIIAQDPRE-GSNVLQGSAINLVVSQG--PGPVQKQVGVTIDPAPDDKD 558 Query: 592 TKIRIIYADARKDGENQEWGTRTIAKSQRLAVKLLLAPN--KDGSVSVYQDGDFV 644 ++RI+ DA+ E + K Q++ ++ N G + V++DG+ + Sbjct: 559 HEVRIVVTDAKGTNE-------VLKKKQKMGQQIQATINYFGKGKLQVFRDGNVI 606 >Q65JS1.1 Q65JS1_BACLD Protein kinase PrkC Length = 657 Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust. Identities = 261/660 (39%), Positives = 368/660 (55%), Gaps = 17/660 (2%) Query: 1 MIGHELGGRYQVIERIGGGGMALVYRAHDILLNRNVAIKVLRNQFVHDEEFIRRFRREAQ 60 +IG + GRY+++ IGGGGMA VY A DI+L+R VAIKVLR FVHD +FIRRFRREAQ Sbjct: 2 LIGRRISGRYEILRAIGGGGMANVYLALDIILDREVAIKVLRFDFVHDADFIRRFRREAQ 61 Query: 61 SAASLSHPNVVSIYDVGQEDEIHYIVMEYVEGKNLNEIIKERAPLQVDEAVRIASQICDA 120 SAASL HPN+VSIYDVG+ED+I+YIVMEYVEG L E I PL EAV+I QI A Sbjct: 62 SAASLDHPNIVSIYDVGEEDDIYYIVMEYVEGMTLKEYINRTGPLHPKEAVQIMEQIVSA 121 Query: 121 LDHAHQNQIIHRDIKPHNILIGRNGRVKVTDFGIARAVTSTTITQTGSVVGSVHYFSPEH 180 + HAH NQI+HRDIKPHNILI G +KVTDFGIA A++STTIT T SV+GSVHY SPE Sbjct: 122 IAHAHDNQIVHRDIKPHNILIDHMGHIKVTDFGIAMALSSTTITHTNSVLGSVHYLSPEQ 181 Query: 181 AKGVTTGEKSDLYSLGIVLYQMLTGVLPFLGESPISVALKHLQEEFEEPRLLNPLIPQSV 240 A+G + +KSD+YSLGIVL+++LT +PF GES +S+ALKHLQ E + NP +PQS+ Sbjct: 182 ARGGLSTKKSDIYSLGIVLFELLTARMPFEGESAVSIALKHLQSETPSVKRWNPAVPQSI 241 Query: 241 ENVILRSMRKNPEERYQSAKEMLQDLETCLLPERRSESKTQFHDEEDEDRTRIIPAIR-- 298 ENV+L++M K+P RY++A+EM DL+T P+R +E + F D++ T+ +P I+ Sbjct: 242 ENVVLKAMAKDPFHRYEAAEEMENDLKTAFDPDRLNEKR--FTIPSDDEMTKAVPIIKNL 299 Query: 299 PMQRGLXXXXXXXXXXXXXXXXXXXXXPGKRKSGRAVLW--ISLTLLVLIAMGGVV-WYV 355 P K + W I LT+ ++A V+ V Sbjct: 300 PENGSSSQSGGGEEEAAPLSKKEKKKQAKANKKKKRKKWPLILLTVFFVLAASAVLALTV 359 Query: 356 NAKLAV-DEVAVPKVTGLSFEAAKAELAKVGLVADEPPAGEYNANFEPDVVLKQSKEPDT 414 L + +VAVP V GL +E A +L G D + E +++K Sbjct: 360 FPSLFIPKDVAVPDVAGLEYEEAVIKLEDEGFEVDPNAEDIADDKIEEGLIVKTDPAAGD 419 Query: 415 MVKEDTHIALTVNIPKPLSKMIPLAGKTEEEAIKLLIAEGVDQSRITPDQRYSEDFPEGQ 474 +VKE + + L + K +++ + G+ + A KLL +G I ++ + E+ G Sbjct: 420 IVKEGSTVKLYKSSGKEKTEVDDVVGQKVDAAKKLLEQKGF--KNIKTEEVHDEE-EAGT 476 Query: 475 VIGTEPAVDSEYDPATATIKLIVSQGKETADVPDLTNKPQAEAKSLLEAAGLVLGXXXXX 534 +I +PA +E A +KL VS G E + DL + A L+ LVL Sbjct: 477 IIEQDPAAGTEIVAADDEVKLTVSLGPEAITLRDLKTYSKQAASGYLDDHQLVL-VEKEA 535 Query: 535 XXXXXXXGIVMEQWPYEKGDTASPGEKINITVSKG---YPPEALEYTFNVPVAPSVEGTK 591 G V++Q P E G + PG+K+ +T S G P + + ++P P G + Sbjct: 536 HSEDVPEGQVIKQKP-EAGASVKPGDKVEVTFSLGPKQKPVKTVTEKIDIPYEPGAAGEE 594 Query: 592 TKIRIIYADARKDGENQEWGTRTIAKSQRLAVKLLLAPNKDGSVSVYQDGDFVATYSIKY 651 ++I D + + A ++R +K +AP + G V + V + +I+Y Sbjct: 595 QNVQISIDDEEHSISDVYENFKITAPAER-TIKFRIAPGQKGYYQVTINDKVVRSKTIEY 653 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.314 0.133 0.377 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 4,032,321,294 Number of extensions: 161770474 Number of successful extensions: 494735 Number of sequences better than 1.0e-05: 41785 Number of HSP's gapped: 441081 Number of HSP's successfully gapped: 42420 Length of query: 743 Length of database: 3,060,696,203 Length adjustment: 144 Effective length of query: 599 Effective length of database: 1,704,070,043 Effective search space: 1020737955757 Effective search space used: 1020737955757 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 135 (56.6 bits)