BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0490.0028.p (327 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Q65IY4.1 Q65IY4_BACLD Putative uncharacterized protein 595 e-168 B3KFH3.1 B3KFH3_9BACI Platelet-activating factor acetylhydrolase... 592 e-167 A7Z596.1 A7Z596_BACA2 Putative uncharacterized protein 581 e-164 Q70K06.1 Q70K06_BACAM Putative uncharacterized protein 581 e-164 B4ADD4.1 B4ADD4_BACPU Putative choline esterase 541 e-152 >Q65IY4.1 Q65IY4_BACLD Putative uncharacterized protein Length = 378 Score = 595 bits (1534), Expect = e-168, Method: Compositional matrix adjust. Identities = 287/327 (87%), Positives = 304/327 (92%), Gaps = 3/327 (0%) Query: 1 MFPEVYDMLNEQPLISAYLEGKGFFSIDIKTQCYDDLALSGKEKRYPVLFYVCGGGGSPE 60 MFPEVY+M NEQPL++A K FSIDIKTQCYDDLALSGKEKRYPVLFYVCGGGGSPE Sbjct: 55 MFPEVYEMFNEQPLVTAL---KDVFSIDIKTQCYDDLALSGKEKRYPVLFYVCGGGGSPE 111 Query: 61 WGTVLCTDMASIGYVVVSIGHPNSTMYKRKDGRLFNVSEDFSDAIMALSEDPGMQALAGK 120 WGTV+CTD+AS+GYVVVSIGH NSTMYKRKDGRLFNVS+DFSD IMA SEDP M ALAGK Sbjct: 112 WGTVICTDLASMGYVVVSIGHQNSTMYKRKDGRLFNVSKDFSDVIMAFSEDPEMLALAGK 171 Query: 121 MEMRPDDETAAQMCRNVLTLPIISRVTEYSELQAEDVRTVADYLYKLDAGEQNSIFEGRL 180 MEMRPDDETA +MC NVLTLPI++++TEYSELQAEDVR VADYLYKLD+GE NSIF+GRL Sbjct: 172 MEMRPDDETAIEMCHNVLTLPILAKLTEYSELQAEDVRYVADYLYKLDSGELNSIFKGRL 231 Query: 181 LFDIGMGIIGHSYGGLTTAMVCRDDDRFACGIGLDSGAFGLLGSDLKTPFLLLFREPNYN 240 L DIGMGI+GHSYGG TTA+VCRDDDRFACGIGLDSGAFGLL SDLK PFLLLF EPNYN Sbjct: 232 LLDIGMGIVGHSYGGPTTAIVCRDDDRFACGIGLDSGAFGLLDSDLKKPFLLLFCEPNYN 291 Query: 241 MNAIIGANNSMETYYFSVDRVAHLDYCDIVFTSVNEQLRGERDAMEMRNLVTDYTKNFFD 300 MNAIIGANNSMETYYFSVDRVAHLDYCDIVFTSVNE+LRGERDAMEMRNLVTDYTKNFFD Sbjct: 292 MNAIIGANNSMETYYFSVDRVAHLDYCDIVFTSVNEELRGERDAMEMRNLVTDYTKNFFD 351 Query: 301 HYILQKAVSVESLAYDGVDLIKKTSNK 327 HYIL KA SVESLAYDGVDLIKKTSNK Sbjct: 352 HYILLKAASVESLAYDGVDLIKKTSNK 378 >B3KFH3.1 B3KFH3_9BACI Platelet-activating factor acetylhydrolase plasma/intracellular isoform II Length = 378 Score = 592 bits (1526), Expect = e-167, Method: Compositional matrix adjust. Identities = 285/327 (87%), Positives = 305/327 (93%), Gaps = 3/327 (0%) Query: 1 MFPEVYDMLNEQPLISAYLEGKGFFSIDIKTQCYDDLALSGKEKRYPVLFYVCGGGGSPE 60 MFPE Y+ML+EQPL++A K +SIDIKTQCYDDLALS KEKRYPVLFYVCGGGGSPE Sbjct: 55 MFPEFYEMLDEQPLLAAL---KDAYSIDIKTQCYDDLALSRKEKRYPVLFYVCGGGGSPE 111 Query: 61 WGTVLCTDMASIGYVVVSIGHPNSTMYKRKDGRLFNVSEDFSDAIMALSEDPGMQALAGK 120 WGTV+CTD+AS+GYVVVSIGH NSTMYKRKDGRLFNVS+DFSD IMA SEDP M ALAGK Sbjct: 112 WGTVICTDLASMGYVVVSIGHQNSTMYKRKDGRLFNVSKDFSDVIMAFSEDPEMVALAGK 171 Query: 121 MEMRPDDETAAQMCRNVLTLPIISRVTEYSELQAEDVRTVADYLYKLDAGEQNSIFEGRL 180 MEMRPDDETA +MC+NVLTLPI++++T+YSELQAEDVR VADYLYKLD+GE NSIF+GRL Sbjct: 172 MEMRPDDETAIEMCQNVLTLPILAKLTKYSELQAEDVRYVADYLYKLDSGELNSIFKGRL 231 Query: 181 LFDIGMGIIGHSYGGLTTAMVCRDDDRFACGIGLDSGAFGLLGSDLKTPFLLLFREPNYN 240 L DIGMGI+GHSYGG TTAMVCRDDDRFACGIGLDSGAFGL GSDLK PFLLLF EPNYN Sbjct: 232 LLDIGMGIVGHSYGGPTTAMVCRDDDRFACGIGLDSGAFGLQGSDLKKPFLLLFCEPNYN 291 Query: 241 MNAIIGANNSMETYYFSVDRVAHLDYCDIVFTSVNEQLRGERDAMEMRNLVTDYTKNFFD 300 MNAIIGANNSMETYYFSVDRVAHLDYCDIVFTSVNE+LRGERDAMEMRNLVTDYTKNFFD Sbjct: 292 MNAIIGANNSMETYYFSVDRVAHLDYCDIVFTSVNEELRGERDAMEMRNLVTDYTKNFFD 351 Query: 301 HYILQKAVSVESLAYDGVDLIKKTSNK 327 HYILQKA SVESLAYDGVDLIKKTSNK Sbjct: 352 HYILQKAASVESLAYDGVDLIKKTSNK 378 >A7Z596.1 A7Z596_BACA2 Putative uncharacterized protein Length = 402 Score = 581 bits (1497), Expect = e-164, Method: Compositional matrix adjust. Identities = 280/327 (85%), Positives = 301/327 (92%), Gaps = 3/327 (0%) Query: 1 MFPEVYDMLNEQPLISAYLEGKGFFSIDIKTQCYDDLALSGKEKRYPVLFYVCGGGGSPE 60 MFPEV +ML+EQPL+SA K +SIDIKTQCYDDLALSGKEKRYPVLFYVCGGGGSPE Sbjct: 79 MFPEVCEMLDEQPLLSAL---KDAYSIDIKTQCYDDLALSGKEKRYPVLFYVCGGGGSPE 135 Query: 61 WGTVLCTDMASIGYVVVSIGHPNSTMYKRKDGRLFNVSEDFSDAIMALSEDPGMQALAGK 120 WGTV+CTD+AS+GYV+VSIGH NSTMYKRKDGRLFNVS+DFS IMA SEDP M ALAGK Sbjct: 136 WGTVICTDLASMGYVLVSIGHQNSTMYKRKDGRLFNVSKDFSGVIMAFSEDPEMLALAGK 195 Query: 121 MEMRPDDETAAQMCRNVLTLPIISRVTEYSELQAEDVRTVADYLYKLDAGEQNSIFEGRL 180 MEMRPDDETA +MC+NVLTLPI+ ++TEYSELQAEDVR VADYL KLD+GE NSIF+ RL Sbjct: 196 MEMRPDDETAIEMCQNVLTLPILDKLTEYSELQAEDVRYVADYLVKLDSGELNSIFKDRL 255 Query: 181 LFDIGMGIIGHSYGGLTTAMVCRDDDRFACGIGLDSGAFGLLGSDLKTPFLLLFREPNYN 240 L DIGMGI+GHSYGG TTA+VCRDD+RFACGIGLDSGAFGL GSDLK PFLLLF EPNYN Sbjct: 256 LLDIGMGIVGHSYGGATTAIVCRDDERFACGIGLDSGAFGLQGSDLKKPFLLLFSEPNYN 315 Query: 241 MNAIIGANNSMETYYFSVDRVAHLDYCDIVFTSVNEQLRGERDAMEMRNLVTDYTKNFFD 300 MNAIIGANNSM+TYYFSVDR AHLDYCDIVFTSVNE+LRGERDAMEMRNLVTDYTKNFFD Sbjct: 316 MNAIIGANNSMDTYYFSVDRAAHLDYCDIVFTSVNEELRGERDAMEMRNLVTDYTKNFFD 375 Query: 301 HYILQKAVSVESLAYDGVDLIKKTSNK 327 HYILQKA SVESLAYDGVDLIKKTSNK Sbjct: 376 HYILQKAASVESLAYDGVDLIKKTSNK 402 >Q70K06.1 Q70K06_BACAM Putative uncharacterized protein Length = 402 Score = 581 bits (1497), Expect = e-164, Method: Compositional matrix adjust. Identities = 280/327 (85%), Positives = 301/327 (92%), Gaps = 3/327 (0%) Query: 1 MFPEVYDMLNEQPLISAYLEGKGFFSIDIKTQCYDDLALSGKEKRYPVLFYVCGGGGSPE 60 MFPEV +ML+EQPL+SA K +SIDIKTQCYDDLALSGKEKRYPVLFYVCGGGGSPE Sbjct: 79 MFPEVCEMLDEQPLLSAL---KDAYSIDIKTQCYDDLALSGKEKRYPVLFYVCGGGGSPE 135 Query: 61 WGTVLCTDMASIGYVVVSIGHPNSTMYKRKDGRLFNVSEDFSDAIMALSEDPGMQALAGK 120 WGTV+CTD+AS+GYV+VSIGH NSTMYKRKDGRLFNVS+DFS IMA SEDP M ALAGK Sbjct: 136 WGTVICTDLASMGYVLVSIGHQNSTMYKRKDGRLFNVSKDFSGVIMAFSEDPEMLALAGK 195 Query: 121 MEMRPDDETAAQMCRNVLTLPIISRVTEYSELQAEDVRTVADYLYKLDAGEQNSIFEGRL 180 MEMRPDDETA +MC+NVLTLPI+ ++TEYSELQAEDVR VADYL KLD+GE NSIF+ RL Sbjct: 196 MEMRPDDETAIEMCQNVLTLPILDKLTEYSELQAEDVRYVADYLVKLDSGELNSIFKDRL 255 Query: 181 LFDIGMGIIGHSYGGLTTAMVCRDDDRFACGIGLDSGAFGLLGSDLKTPFLLLFREPNYN 240 L DIGMGI+GHSYGG TTA+VCRDD+RFACGIGLDSGAFGL GSDLK PFLLLF EPNYN Sbjct: 256 LLDIGMGIVGHSYGGATTAIVCRDDERFACGIGLDSGAFGLQGSDLKKPFLLLFSEPNYN 315 Query: 241 MNAIIGANNSMETYYFSVDRVAHLDYCDIVFTSVNEQLRGERDAMEMRNLVTDYTKNFFD 300 MNAIIGANNSM+TYYFSVDR AHLDYCDIVFTSVNE+LRGERDAMEMRNLVTDYTKNFFD Sbjct: 316 MNAIIGANNSMDTYYFSVDRAAHLDYCDIVFTSVNEELRGERDAMEMRNLVTDYTKNFFD 375 Query: 301 HYILQKAVSVESLAYDGVDLIKKTSNK 327 HYILQKA SVESLAYDGVDLIKKTSNK Sbjct: 376 HYILQKAASVESLAYDGVDLIKKTSNK 402 >B4ADD4.1 B4ADD4_BACPU Putative choline esterase Length = 381 Score = 541 bits (1394), Expect = e-152, Method: Compositional matrix adjust. Identities = 256/327 (78%), Positives = 283/327 (86%) Query: 1 MFPEVYDMLNEQPLISAYLEGKGFFSIDIKTQCYDDLALSGKEKRYPVLFYVCGGGGSPE 60 MFPEVY+ML+EQPL++ YL+ FFS DIKT CYDDLALSGKEKRYPV+FYVCGGGGSPE Sbjct: 55 MFPEVYEMLHEQPLVTEYLKEINFFSTDIKTHCYDDLALSGKEKRYPVVFYVCGGGGSPE 114 Query: 61 WGTVLCTDMASIGYVVVSIGHPNSTMYKRKDGRLFNVSEDFSDAIMALSEDPGMQALAGK 120 WGT +CTDMAS GYVVVSIGH +STMYKRKDG+L NVS+ FSD IMA SEDP M ALA K Sbjct: 115 WGTAICTDMASQGYVVVSIGHQDSTMYKRKDGKLVNVSKGFSDVIMAFSEDPEMMALASK 174 Query: 121 MEMRPDDETAAQMCRNVLTLPIISRVTEYSELQAEDVRTVADYLYKLDAGEQNSIFEGRL 180 M+MRPDD+TA +MC N+LTLPII+ +T YSE QAEDVR VADYL++LD+GE SIF RL Sbjct: 175 MKMRPDDKTAIEMCHNILTLPIINELTRYSERQAEDVRYVADYLHRLDSGEWKSIFHDRL 234 Query: 181 LFDIGMGIIGHSYGGLTTAMVCRDDDRFACGIGLDSGAFGLLGSDLKTPFLLLFREPNYN 240 L D GMGI GHSYGG T A+VCRDDDRF CG+GLDSGAFGLL SDL PFLLLF EPNY Sbjct: 235 LLDTGMGIAGHSYGGPTAAIVCRDDDRFVCGVGLDSGAFGLLDSDLNKPFLLLFSEPNYY 294 Query: 241 MNAIIGANNSMETYYFSVDRVAHLDYCDIVFTSVNEQLRGERDAMEMRNLVTDYTKNFFD 300 MNAIIGANNSMETYYFSVD AHLDYCDIVFT V+E++RG RD +EMRNLVTDYTK FFD Sbjct: 295 MNAIIGANNSMETYYFSVDGAAHLDYCDIVFTGVDEEIRGTRDVLEMRNLVTDYTKTFFD 354 Query: 301 HYILQKAVSVESLAYDGVDLIKKTSNK 327 HYILQKAV VESL+Y+GVDLIKKTSNK Sbjct: 355 HYILQKAVRVESLSYEGVDLIKKTSNK 381 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.321 0.139 0.409 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,975,297,521 Number of extensions: 84176242 Number of successful extensions: 182874 Number of sequences better than 1.0e-05: 32 Number of HSP's gapped: 182863 Number of HSP's successfully gapped: 32 Length of query: 327 Length of database: 3,060,696,203 Length adjustment: 136 Effective length of query: 191 Effective length of database: 1,779,438,163 Effective search space: 339872689133 Effective search space used: 339872689133 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 131 (55.1 bits)