BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0490.0023.p
         (121 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B3W8T0.1 B3W8T0_LACCB Cation transporting P-type ATPase EC=3.6.3.-    137   4e-31
Q037Q1.1 Q037Q1_LACC3 Cation transport ATPase                         137   4e-31
C5F4G7.1 C5F4G7_LACPA Cation transport ATPase                         137   4e-31
C5G1T0.1 C5G1T0_9LACO Cation-transporting P-type ATPase               136   5e-31
C4VN26.1 C4VN26_9LACO Cation-transporting ATPase Pma1 EC=3.6.3.-      136   5e-31

>B3W8T0.1 B3W8T0_LACCB Cation transporting P-type ATPase EC=3.6.3.-
          Length = 886

 Score =  137 bits (344), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 69/101 (68%), Positives = 80/101 (79%), Gaps = 3/101 (2%)

Query: 19  TSISLAVAAIPEGLPAIVTIILALGVQRMAKRKAIIRKLPAVETLGSTEIICSDKTGTLA 78
           T++SLAVAAIPEGLPAIVTIILALG Q+MAKR A++RKLPAVETLGST+II SDKTGTL 
Sbjct: 277 TAVSLAVAAIPEGLPAIVTIILALGTQKMAKRHALVRKLPAVETLGSTDIIASDKTGTLT 336

Query: 79  LNKMTVEKLYVDGQKVDAGSSIDGLQGRERLVQAMTLCNDS 119
            NKMTVEK+Y DGQ  DA +   G+ G   L+  M   ND+
Sbjct: 337 QNKMTVEKVYYDGQLNDASA---GIHGGNPLMTIMNFANDT 374


>Q037Q1.1 Q037Q1_LACC3 Cation transport ATPase
          Length = 886

 Score =  137 bits (344), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 69/101 (68%), Positives = 80/101 (79%), Gaps = 3/101 (2%)

Query: 19  TSISLAVAAIPEGLPAIVTIILALGVQRMAKRKAIIRKLPAVETLGSTEIICSDKTGTLA 78
           T++SLAVAAIPEGLPAIVTIILALG Q+MAKR A++RKLPAVETLGST+II SDKTGTL 
Sbjct: 277 TAVSLAVAAIPEGLPAIVTIILALGTQKMAKRHALVRKLPAVETLGSTDIIASDKTGTLT 336

Query: 79  LNKMTVEKLYVDGQKVDAGSSIDGLQGRERLVQAMTLCNDS 119
            NKMTVEK+Y DGQ  DA +   G+ G   L+  M   ND+
Sbjct: 337 QNKMTVEKVYYDGQLNDASA---GIHGGNPLMTIMNFANDT 374


>C5F4G7.1 C5F4G7_LACPA Cation transport ATPase
          Length = 886

 Score =  137 bits (344), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 69/101 (68%), Positives = 80/101 (79%), Gaps = 3/101 (2%)

Query: 19  TSISLAVAAIPEGLPAIVTIILALGVQRMAKRKAIIRKLPAVETLGSTEIICSDKTGTLA 78
           T++SLAVAAIPEGLPAIVTIILALG Q+MAKR A++RKLPAVETLGST+II SDKTGTL 
Sbjct: 277 TAVSLAVAAIPEGLPAIVTIILALGTQKMAKRHALVRKLPAVETLGSTDIIASDKTGTLT 336

Query: 79  LNKMTVEKLYVDGQKVDAGSSIDGLQGRERLVQAMTLCNDS 119
            NKMTVEK+Y DGQ  DA +   G+ G   L+  M   ND+
Sbjct: 337 QNKMTVEKVYYDGQLNDASA---GIHGGNPLMTIMNFANDT 374


>C5G1T0.1 C5G1T0_9LACO Cation-transporting P-type ATPase
          Length = 879

 Score =  136 bits (343), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 69/100 (69%), Positives = 79/100 (79%), Gaps = 3/100 (3%)

Query: 20  SISLAVAAIPEGLPAIVTIILALGVQRMAKRKAIIRKLPAVETLGSTEIICSDKTGTLAL 79
           ++SLAVAAIPEGLPAIVTIILALG Q MAK KAI+RKLPAVETLG+T+IICSDKTGTL  
Sbjct: 284 AVSLAVAAIPEGLPAIVTIILALGTQTMAKHKAIVRKLPAVETLGATDIICSDKTGTLTQ 343

Query: 80  NKMTVEKLYVDGQKVDAGSSIDGLQGRERLVQAMTLCNDS 119
           NKMTVEK+Y DGQ  DA   +D       ++Q M L ND+
Sbjct: 344 NKMTVEKIYYDGQLHDASEVVD---ANSDVMQTMLLANDT 380


>C4VN26.1 C4VN26_9LACO Cation-transporting ATPase Pma1 EC=3.6.3.-
          Length = 879

 Score =  136 bits (343), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 69/100 (69%), Positives = 79/100 (79%), Gaps = 3/100 (3%)

Query: 20  SISLAVAAIPEGLPAIVTIILALGVQRMAKRKAIIRKLPAVETLGSTEIICSDKTGTLAL 79
           ++SLAVAAIPEGLPAIVTIILALG Q MAK KAI+RKLPAVETLG+T+IICSDKTGTL  
Sbjct: 284 AVSLAVAAIPEGLPAIVTIILALGTQTMAKHKAIVRKLPAVETLGATDIICSDKTGTLTQ 343

Query: 80  NKMTVEKLYVDGQKVDAGSSIDGLQGRERLVQAMTLCNDS 119
           NKMTVEK+Y DGQ  DA   +D       ++Q M L ND+
Sbjct: 344 NKMTVEKIYYDGQLHDASEVVD---ANSDVMQTMLLANDT 380


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.318    0.133    0.353 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 518,987,916
Number of extensions: 17100724
Number of successful extensions: 61031
Number of sequences better than 1.0e-05: 3948
Number of HSP's gapped: 61000
Number of HSP's successfully gapped: 3950
Length of query: 121
Length of database: 3,060,696,203
Length adjustment: 87
Effective length of query: 34
Effective length of database: 2,241,067,898
Effective search space: 76196308532
Effective search space used: 76196308532
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 126 (53.1 bits)