BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0489.0024.p (265 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Q8D5E8.1 Q8D5E8_VIBVU Transglutaminase-like enzyme 124 1e-26 Q7MCC5.1 Q7MCC5_VIBVY Putative uncharacterized protein VVA1463 124 1e-26 Q6LQS6.1 Q6LQS6_PHOPR Putative uncharacterized protein BLL4869 123 1e-26 A9EP08.1 A9EP08_SORC5 Putative uncharacterized protein 123 2e-26 Q18CU1.1 Q18CU1_CLOD6 Putative DNA repair protein 118 5e-25 >Q8D5E8.1 Q8D5E8_VIBVU Transglutaminase-like enzyme Length = 300 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 76/225 (33%), Positives = 112/225 (49%), Gaps = 14/225 (6%) Query: 2 LQFYTEYTPNTDPFSLGYLFDELPDDLGELCKLIKCQLIHPAMVKKVRHLLTSYTKNEDE 61 L YT+ + T P +PDD+ + +L++ LIH ++K + + Sbjct: 5 LAKYTQQSFFTHPGQFLNTEHPIPDDIAAMVRLVQHNLIHAYWLEKYGVSKPFSERFSEM 64 Query: 62 QFYTVQDMLEALVERNANGIIGERLPRERLIVSCRFHSLLLISMLRSKGVPVRCRVGFAR 121 Q T Q++L L +R ++G++ +R+I CR SLLL S+LR G+P R R GFA Sbjct: 65 QLRTAQEILAELAKRTEGWVLGDKPQAKRVIGICRDFSLLLCSLLRHHGIPARLRCGFAC 124 Query: 122 YLSEHQLKYIDHWICEVWSEGEARWIRVDP------------DIGIVDLQGDDFLEAGVA 169 YL K+ DHWICE W + RWI+VDP D +DL FL AG Sbjct: 125 YLRRG--KWEDHWICEYWHTQQQRWIKVDPQLDDIHQQVLKFDFDPLDLPDGIFLTAGEM 182 Query: 170 WLMARDKEINPQLFGVKKSWGMHYIRNNLCYDLHAVLGQELRYWD 214 WL R+ ++ + G+ + G Y++ NL DL A+ EL WD Sbjct: 183 WLAVREGKVVAKRCGIMQLRGTPYLKANLVRDLFALTSMELLAWD 227 >Q7MCC5.1 Q7MCC5_VIBVY Putative uncharacterized protein VVA1463 Length = 300 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 76/225 (33%), Positives = 112/225 (49%), Gaps = 14/225 (6%) Query: 2 LQFYTEYTPNTDPFSLGYLFDELPDDLGELCKLIKCQLIHPAMVKKVRHLLTSYTKNEDE 61 L YT+ + T P +PDD+ + +L++ LIH ++K + + Sbjct: 5 LAKYTQQSFFTHPGQFLNTEHPIPDDIAVMVRLVQHNLIHAYWLEKYGVSKPFSERFSEM 64 Query: 62 QFYTVQDMLEALVERNANGIIGERLPRERLIVSCRFHSLLLISMLRSKGVPVRCRVGFAR 121 Q T Q++L L +R ++G++ +R+I CR SLLL S+LR G+P R R GFA Sbjct: 65 QLRTAQEILAELAKRTEGWVLGDKPQAKRVIGICRDFSLLLCSLLRYHGIPARLRCGFAC 124 Query: 122 YLSEHQLKYIDHWICEVWSEGEARWIRVDP------------DIGIVDLQGDDFLEAGVA 169 YL K+ DHWICE W + RWI+VDP D +DL FL AG Sbjct: 125 YLRRG--KWEDHWICEYWHTQQQRWIKVDPQLDDIHQQVLKFDFDPLDLPDGIFLTAGEM 182 Query: 170 WLMARDKEINPQLFGVKKSWGMHYIRNNLCYDLHAVLGQELRYWD 214 WL R+ ++ + G+ + G Y++ NL DL A+ EL WD Sbjct: 183 WLAVREGKVEAKRCGIMQLRGTPYLKANLVRDLFALTSMELLAWD 227 >Q6LQS6.1 Q6LQS6_PHOPR Putative uncharacterized protein BLL4869 Length = 293 Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 68/225 (30%), Positives = 115/225 (51%), Gaps = 14/225 (6%) Query: 2 LQFYTEYTPNTDPFSLGYLFDELPDDLGELCKLIKCQLIHPAMVKKVRHLLTSYTKNEDE 61 + +YTE + TD + + L DD+ ++C+ ++ LIH +K+ + K + Sbjct: 3 ISYYTELSEFTDLSCFQHDINLLSDDIEKICEFVQHNLIHAYWLKRYGVQVEESAKFSEM 62 Query: 62 QFYTVQDMLEALVERNANGIIGERLPRERLIVSCRFHSLLLISMLRSKGVPVRCRVGFAR 121 Q +D++ + ++ +R P++R++ CR +L+L S+LR+K +P R R GFA Sbjct: 63 QTRHSKDIITLAMNKSGQSFDVKRNPKDRVVSVCRDFALVLCSVLRAKNIPARIRCGFAT 122 Query: 122 YLSEHQLKYIDHWICEVWSEGEARWIRVDP------------DIGIVDLQGDDFLEAGVA 169 YL + DHWICE W++ E+RW+ VD D D+ +FL AG A Sbjct: 123 YLVAGHFE--DHWICEYWNQQESRWVMVDAQLDSTHLAILNFDFDPCDVPSSEFLYAGKA 180 Query: 170 WLMARDKEINPQLFGVKKSWGMHYIRNNLCYDLHAVLGQELRYWD 214 W + R +P FG G+ +I+ ++ DL+A+ EL WD Sbjct: 181 WALCRGDFTSPDKFGFNSFNGLPFIKGSIIRDLYALSKVELLAWD 225 >A9EP08.1 A9EP08_SORC5 Putative uncharacterized protein Length = 295 Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 78/274 (28%), Positives = 123/274 (44%), Gaps = 15/274 (5%) Query: 1 VLQFYTEYTPNTDPFSLGYLFDELPDDLGELCKLIKCQLIHPAMVKKVRHLLTSYTKNED 60 +L FYT T + FDELP D+ L ++++ L+H + L+ + E Sbjct: 7 ILDFYTRPAAMTSGGAHAPRFDELPGDVASLVRVVQGLLLHVHWAQAYGVELSDQRRAE- 65 Query: 61 EQFYTVQDMLEALVERNANGIIGERLPRERLIVSCRFHSLLLISMLRSKGVPVRCRVGFA 120 ML+ L + + R RL+ SCR ++LL++ LR+KG+P R R GF Sbjct: 66 SHLRPTDRMLDRLFAHDDRPLSAARPLDTRLVGSCRDFTVLLVAFLRAKGIPARARCGFG 125 Query: 121 RYLSEHQLKYIDHWICEVWSEGEARWIRVD------------PDIGIVDLQGDDFLEAGV 168 Y H ++DHW+CE W+ E RW+ VD PD ++D+ F+ AG Sbjct: 126 GYF--HATDFVDHWVCEHWNAAEERWVLVDAQIDDVQRAALKPDFDVLDVPRHRFVVAGD 183 Query: 169 AWLMARDKEINPQLFGVKKSWGMHYIRNNLCYDLHAVLGQELRYWDYPPICQKGIXXXXX 228 AW R E +P FG+ G+ +I N+ D+ A+ E+ WD Sbjct: 184 AWAQCRAGEADPSKFGMFDMRGLWFISGNVLRDIAALNNMEMLPWDDWGAMIGPDEPPRD 243 Query: 229 XXXXXXXXVSMYLQDPDANLEELQALFLENEFLQ 262 ++ + PDA EL+ L+ +E L+ Sbjct: 244 DQLALFDRLAAITRSPDARFAELRQLYEGDERLR 277 >Q18CU1.1 Q18CU1_CLOD6 Putative DNA repair protein Length = 1142 Score = 118 bits (296), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 70/217 (32%), Positives = 113/217 (52%), Gaps = 16/217 (7%) Query: 12 TDPFSLGYLFDELPDDLGELCKLIKCQLIHPAMVKKVRHLLTSYTKNEDEQFYTVQDMLE 71 T+P + +LP EL K+++ +IH K+ + + ++++E T+ ML+ Sbjct: 13 TNPKKFENKYQDLPKTPIELLKVVQSLVIHGDQ-GKLYGISFNKQQSDEELLRTIPQMLK 71 Query: 72 ALVERNANGIIGERLPRERLIVSCRFHSLLLISMLRSKGVPVRCRVGFARYLSEHQLKYI 131 + E N+N + R P++RL+ CR +SLLL+S+LR +G R R GFA Y E +L Y Sbjct: 72 RIFEINSNPLTIPRNPKQRLVGMCRDYSLLLVSLLRYRGFEARMRAGFANYF-ESELTYE 130 Query: 132 DHWICEVWSEGEARWIRVDPDIGIVDL-------------QGDDFLEAGVAWLMARDKEI 178 DHW+ E + + RWIR+D I + + D FL AW+ + Sbjct: 131 DHWLVEYYDTLKKRWIRIDAQIDDIQKNYFQINFDTHDVGKTDGFLTGSEAWIRCQQGHA 190 Query: 179 NPQLFGVKKSW-GMHYIRNNLCYDLHAVLGQELRYWD 214 +P FG K+W G H ++ NL +D + ++G EL WD Sbjct: 191 HPDDFGYNKNWKGWHSVKGNLLHDFNNMIGLELLPWD 227 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.324 0.142 0.453 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,657,214,017 Number of extensions: 66742433 Number of successful extensions: 139501 Number of sequences better than 1.0e-05: 45 Number of HSP's gapped: 139387 Number of HSP's successfully gapped: 45 Length of query: 265 Length of database: 3,060,696,203 Length adjustment: 133 Effective length of query: 132 Effective length of database: 1,807,701,208 Effective search space: 238616559456 Effective search space used: 238616559456 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (22.0 bits) S2: 130 (54.7 bits)