BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0489.0004.p (850 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C3HA42.1 C3HA42_BACTU Beta-ketoacyl synthase 460 e-127 B8I5H4.1 B8I5H4_CLOCE Beta-ketoacyl synthase 446 e-123 C3HA41.1 C3HA41_BACTU Beta-ketoacyl synthase 416 e-114 B8I5H5.1 B8I5H5_CLOCE Amino acid adenylation domain protein 378 e-102 B8I5I0.1 B8I5I0_CLOCE Condensation domain protein 332 8e-89 >C3HA42.1 C3HA42_BACTU Beta-ketoacyl synthase Length = 1604 Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust. Identities = 271/881 (30%), Positives = 458/881 (51%), Gaps = 58/881 (6%) Query: 1 LIAGESEGHQVHTLVEKQDSQFRLQIASRAIPGNAENHNEWSLNAEGKIVPFQHTGAASV 60 L+ + E VHT+++K+ R IAS+ +W +AEG+ + + Sbjct: 744 LLVHQDENKVVHTIIKKEKEGVRFTIASKE-------GEKWIPHAEGRAYELKEMKSIMF 796 Query: 61 DIQQLQEKSEWEHIEPDFGSIVGRTA----FGPRWNNIQQLSQSDDRVLVHVKLGERYAE 116 D+ +++ + E I+ ++ T+ FGPRW N +++ D LV +KL + + Sbjct: 797 DLSLMKKDANREKIKVEYEDDTQLTSNVFTFGPRWLNFKEVILDHDEQLVELKLSDEFKG 856 Query: 117 DFSAYGYHPALLDTGLNAVTMFILRE----LYLPFSFKKFTFYDNMPDAFYSYLRKRAAG 172 D HP+LLD NA +FI + +LP S+K Y MP FY+++ K+++ Sbjct: 857 DLKDLLLHPSLLD---NAANVFIGEDDDDSTFLPLSYKSVKIYSVMPQHFYAHVIKKSS- 912 Query: 173 GENKETISYDISLIDEQGNVFAEVENYTLKKVP-------AAMVTKDLFHQLHWVKEPRL 225 NKET +I LID G VFAE+ +Y LKK + + F+ + WV+ + Sbjct: 913 --NKETKVCNIQLIDTAGVVFAEITDYVLKKADRLDTIFDENLEKESSFYHIKWVQGSKP 970 Query: 226 PAGRNMMDGAVLLFGDEXXXXXXXXXXXXXXXXKVIRVRHGETYSREQDSSYTVGNEEGD 285 +L+F D+ +I+V G + + D + + D Sbjct: 971 VKVNTNTSETILVFKDKQEIYKKVIKELQYDNHNIIQVEFGNRFEKINDQQFIINGMADD 1030 Query: 286 YQRLFADLQNRKVSRIIHCYALDAGGEASGLGHLQALQAKSIQSLFYIVKSLVQAKYKQA 345 Y L +++ R +++IIH ++ GEA +L+ LQ + SLFY+V+ + K K+ Sbjct: 1031 YSNLINEVKERNITKIIHLSSM-TNGEAIHFSNLKELQHNGLYSLFYLVRGISVNKVKRN 1089 Query: 346 IDLVLLGQYGFEITGHEEALEPCQTAFFNLGKAVAAEYPNVSCRSIDLDDQTAWAAILEE 405 IDL+L+ E+TG+E+ + P A F LG ++ E+ N+ CR+ID+DD TA +I+EE Sbjct: 1090 IDLILISNNVTEVTGNEKTINPLGAAMFGLGSVISQEFSNIKCRAIDVDDHTAITSIIEE 1149 Query: 406 IEDGQNVYQVAYRENERYVQEFGRYSGEP-VSGQPLELQENGFYXXXXXXXXXXXEIARY 464 I+ YQ+A+R N RY+ E P G LE++ENG Y EIA+Y Sbjct: 1150 IKSEDKHYQIAFRNNIRYISELDVVEHNPDKQGAGLEIKENGVYMITGGTGGIGLEIAKY 1209 Query: 465 LSSQNKICLGLLSRGGQNE--------NDG---KRNRRMEILEEIERSGSRVMVCPCDVT 513 L+ +NK+ + LL+R E NDG K +R++EI+ I+ GS V C+V+ Sbjct: 1210 LAGKNKVNIVLLNRSKLPEMELWEDIINDGSDQKLSRKLEIIRSIQGMGSEVKCYSCEVS 1269 Query: 514 AEQELAAGLDKLREAFGPVKGVIHAAGLAGSGFLFTKTWAEFCRVTKPKIEGTYLLHNLI 573 ++ + +++E +G + G+ H AG+AG GF+F K A F V PKI GT+L+ L Sbjct: 1270 DFSSMSKVIGEVKEKYGKINGIFHCAGVAGEGFIFRKQEAVFKEVINPKISGTWLIDYLT 1329 Query: 574 K-EPLDFFMLFSSVATLEGSPGQGDYIVGNGYLDGFAPYLRRQGIRGTTLNWAVWEEVGM 632 K E +DF +LFSS+ ++ G GQGDY N YLD F+ Y ++G + ++NW W+EVG+ Sbjct: 1330 KDENIDFSILFSSINSIFGGAGQGDYTAANAYLDSFSYYRNKKGKKTISINWPAWDEVGI 1389 Query: 633 AVDYGVVTGGGICKPLKTHEAIAAFGQAIAMDRSQVMIGSLNLDMLAAVQESSFLRIEAG 692 AVDYGV I K L ++A++ + + V+ G LN+D+L + + Sbjct: 1390 AVDYGVTDEFSIFKLLTVNKALSILDTIVDNALTNVIPGKLNMDILEVAKGELPFELSIS 1449 Query: 693 LIRRLGVPKQT---------VHDTFPFTITGRADGNYDDIEQAISRIWAETMHLPSVNIY 743 + +L K+T + T I G+ + Y + E+ I+++++ + +P +++Y Sbjct: 1450 IKNKLKEAKKTRVETEKVSLKNSTSDVVIKGKGEY-YSETEKNIAQMYSMVLDIPELDLY 1508 Query: 744 SSFLDIGGDSLIATQLLRKLEMEFPGILDLPDLFTYSSVAELSGYIKQQ-RDRQQMKPAK 802 SF +GGDS++ATQLL+ + ++P ++D+ D+FTY SV ELS YI + + +K + Sbjct: 1509 ESFSAMGGDSIMATQLLKLINQKYPNLVDISDIFTYPSVVELSEYIDGEINENDHLKNGE 1568 Query: 803 SAAADPVPPSGDSLDVQLQSMMDKLTSDEQTVEDLVELLSQ 843 + + ++L+ +L+ + D L ++D +E+L + Sbjct: 1569 TNVNND-----NNLEKELRDLFDDLQKGNIDIQDGLEILGK 1604 >B8I5H4.1 B8I5H4_CLOCE Beta-ketoacyl synthase Length = 1613 Score = 446 bits (1146), Expect = e-123, Method: Compositional matrix adjust. Identities = 266/883 (30%), Positives = 448/883 (50%), Gaps = 52/883 (5%) Query: 1 LIAGESEGHQVHTLVEKQDSQFRLQIASRAIPGNAENHNEWSLNAEGKIVPFQHTGAASV 60 L GE+E V T+++ +D +ASR + ++W + +GK+ + + Sbjct: 741 LAVGENEARDVQTVLKIEDGYLGFYVASRP------DGDKWVRHVQGKVFLDEDRNSVQY 794 Query: 61 DIQQLQEKSEWEHIEPDFGSIVGRTAFGPRWNNIQQLSQSDDRVLVHVKLGERYAEDFSA 120 + ++ + +E G G GPRWNN++++ D VL ++ L + + D Sbjct: 795 NPDEMARSAIFEEDIELTGKRKGLIDTGPRWNNLKKVYTLHDGVLAYLVLPDEFTGDLDK 854 Query: 121 YGYHPALLDTGLNAVTMFILRELYLPFSFKKFTFYDNMPDAFYSYLRKRAAGGENKETIS 180 HPAL+D+ +N I LYLP+S+K Y MPD YS +R++ N ET S Sbjct: 855 CIIHPALMDSAVNVAIGSIGEGLYLPWSYKSLIIYGKMPDKLYSLIRQKGKADLNMETAS 914 Query: 181 YDISLIDEQGNVFAEVENYTLKKVPAAMVTKD-------LFHQLHWVKEPRLPAGRNMMD 233 +DI L+DE+G VFA++ENYTLKKV + T D +FH+++W+K ++ + Sbjct: 915 FDIILMDEKGRVFADIENYTLKKVNQLLTTPDYKSVKVNMFHRMNWIKNYTTKGVESIHN 974 Query: 234 ------GAVLLFGDEXXXXXXXXXXXXXXXXKVIRVRHGETYSREQDSSYTVGNEEGDYQ 287 G VLLF D V+ V Y + Y++G E DY Sbjct: 975 AYKPAAGKVLLFKDR---GSLWMDIKETLGVDVVEVDICGCYEKFATGRYSIGYGEEDYD 1031 Query: 288 RLFADLQNRKVSRIIHCYALDAGGEASGLGHLQALQAKSIQSLFYIVKSLVQAKYKQAID 347 RL DL+ +S+IIH ++ L Q + + SL Y+++SL+ K + ++ Sbjct: 1032 RLIKDLREEGISQIIHLSSIGWEKLPEDSDSLAETQKRGLYSLVYLIRSLISNKIRNEVE 1091 Query: 348 LVLLGQYGFEITGHEEALEPCQTAFFNLGKAVAAEYPNVSCRSIDLDDQTAWAAILEEIE 407 L+ + Y +TG E + + EY N+ CR ID+D+ T ++ E+ Sbjct: 1092 LIAVSDYVNMVTGMERRINYYNATIPGICTVAGQEYGNLKCRCIDIDETTEVNKLVSELN 1151 Query: 408 DGQNVYQVAYRENERYVQEFGRYSGEPVSGQPLELQENGFYXXXXXXXXXXXEIARYLSS 467 + +AYR+ ERY QE E + +E+ E G Y E A YLS+ Sbjct: 1152 SRDSCSLIAYRDGERYHQEMDEVHLEDSEPEEIEICEKGVYIITGGLGGIGREFAGYLSA 1211 Query: 468 QNKICLGLLSRGGQNENDG-----KRN------RRMEILEEIERSGSRVMVCPCDVTAEQ 516 + + L L++R + + K+N +++E +++IE+SGS+V+ DV+ E Sbjct: 1212 KKPVSLVLIARTYIPDREAWDEILKKNSGTMLAQKIEFIKDIEKSGSQVVYYSADVSNEN 1271 Query: 517 ELAAGLDKLREAFGPVKGVIHAAGLAGSGFLFTKTWAEFCRVTKPKIEGTYLLHNLIKEP 576 ++ L +R +G + GVIHAAG+AG+GF+ K F RV KPK++GT++L L KE Sbjct: 1272 DMKNVLSSIRRKYGRINGVIHAAGIAGNGFIIRKDMEIFTRVVKPKVQGTFILDKLTKED 1331 Query: 577 -LDFFMLFSSVATLEGSPGQGDYIVGNGYLDGFAPYLRRQ-GIRGTTLNWAVWEEVGMAV 634 LDFF++FSS+ ++ G GQ DY N ++D FA Y R+ G + ++NW W+E GMA Sbjct: 1332 NLDFFIMFSSINSILGGAGQSDYTAANSFMDSFADYRRKTAGGKTVSINWTAWKETGMAF 1391 Query: 635 DYGVVTGG--GICKPLKTHEAIAAFGQAIAMDRSQVMIGSLNLDMLAAVQESSFLRIE-- 690 D G++ G G+ P T +AI F + A ++++ G L+ + + + + +R Sbjct: 1392 DNGIINGKIRGVFLPATTSDAIQMFEEITAKKLTRIIAGQLDFETIPLLDSGTAIRFSNK 1451 Query: 691 -AGLIRRLGVPKQTVH--------DTFPFTITGRADGNYDDIEQAISRIWAETMHLPSVN 741 G I + V T + P I G D ++ ++RIWA + L V+ Sbjct: 1452 IQGKIHKYKVRSNTDSQRNTAREGEITPLKIKGSKDKGISSVQAVVARIWAGALGLEEVS 1511 Query: 742 IYSSFLDIGGDSLIATQLLRKLEMEFPGILDLPDLFTYSSVAELSGYIKQQRDRQQMKPA 801 +Y +F D+GGDS++AT LL+ LE EFPGI+D+ D+F Y S++ +S YI+ + +++++P Sbjct: 1512 VYDNFNDLGGDSVMATLLLKNLEKEFPGIVDISDIFNYPSISAMSEYIESRTGKEKIQP- 1570 Query: 802 KSAAADPVPPSGDSLDVQLQSMMDKLTSDEQTVEDLVELLSQR 844 + G++ ++ +M +L+ E T+E++ +L+ + Sbjct: 1571 DVENQQIMTEDGEA---GMEEIMQQLSRGEITIEEVDKLMKTK 1610 >C3HA41.1 C3HA41_BACTU Beta-ketoacyl synthase Length = 1609 Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust. Identities = 248/825 (30%), Positives = 422/825 (51%), Gaps = 52/825 (6%) Query: 7 EGHQVHTLVEKQDSQFRLQIASRAIPGNAENHNEWSLNAEGKIVPFQHTGAASVDIQQLQ 66 E +VHT++ ++ + S+ EW +AE IV DI+ L+ Sbjct: 749 ETREVHTIINIKEDALEFSVVSKL------GEVEWVKHAEALIVKEVKERPKKYDIEVLK 802 Query: 67 EKSEWEHI------------EPDFGSI-----VGRT----AFGPRWNNIQQLSQSDDRVL 105 + E +I + D+ S+ R+ + G RW + ++ + VL Sbjct: 803 KNYESVYIIQKNNRSLVDVNQKDYESVYFIEDTNRSESIVSVGDRWKCTNAIYRNSEGVL 862 Query: 106 VHVKLGERYAEDFSAYGYHPALLDTGLNAVTMFILRELYLPFSFKKFTFYDNMPDAFYSY 165 +++ + Y DF Y HPA++D +NA T I E YLP+ +K F + + P FYSY Sbjct: 863 CELEIKKEYQNDFDCYSLHPAMMDCAVNAATFTINDESYLPYYYKNFRIFGSTPKKFYSY 922 Query: 166 LRKRAAGGENKETISYDISLIDEQGNVFAEVENYTLKKVPAAM----VTKDLFHQLHWVK 221 + K+ +N+ET +DI L++E G VF E+ NY +KKV + +K ++H+L WV Sbjct: 923 ITKKT--NDNEETGKFDILLLNEAGEVFGEISNYIVKKVHGSTEKIDKSKQMYHKLAWVS 980 Query: 222 EPRLPAGRNMMDGAVLLFGDEXXXXXXXXXXXXXXXXKVIRVRHGETYSREQDSSYTVGN 281 + R + +LLF +E VI V G+ +S+ + YT+ Sbjct: 981 KKDYILERKYDNRNILLFKNEGELSNKIAKQLRVDGKSVIEVELGKQFSKISNWKYTIRG 1040 Query: 282 EEGDYQRLFADLQNRKVSRIIHCYALDAGGEASGLGHLQALQAKSIQSLFYIVKSLVQAK 341 E+ DY +LF ++N +++IIH ++ + L LQ + ++SLFY+ KS+++ Sbjct: 1041 EQEDYDKLFEAIENENINQIIHLMTINNETDEELL-QLQKKLSIGLESLFYLTKSIMK-N 1098 Query: 342 YKQAIDLVLLGQYGFEITGHEEALEPCQTAFFNLGKAVAAEYPNVSCRSIDLDDQTAWAA 401 K +++L+L + + G E ++P AFF GK + EYP +S R ID+DD+ Sbjct: 1099 TKNSMELLLFTDFAHRVNGEEFKIKPHNAAFFGFGKVIEKEYPKLSVRCIDIDDKICVED 1158 Query: 402 ILEEIEDGQNVYQVAYRENERYVQEFGRYSGEPVSGQPLELQENGFYXXXXXXXXXXXEI 461 + EI + V VAYR+ ++YVQE + + + +E +++G Y E+ Sbjct: 1159 CITEINSKKQVELVAYRDKDKYVQELQNVDIKALPEEKVEFKKDGVYVITGGMGGIGLEM 1218 Query: 462 ARYLSSQNKICLGLLSRGGQNENDGKRNR---RMEILEEIERSGSRVMVCPCDVTAEQEL 518 A+Y+SS+ + L L+ R G + ++++ +++ + EI+ SGSRV +V E E+ Sbjct: 1219 AKYISSKENVNLILIGRSGLSATASEKSKIAYKIKTINEIQESGSRVECYKANVANEHEI 1278 Query: 519 AAGLDKLREAFGPVKGVIHAAGLAGSGFLFTKTWAEFCRVTKPKIEGTYLLHNLIKEP-L 577 ++R+ F + GVIH AG++G GF+F K F V KPKI GT++++ L K+ L Sbjct: 1279 KEVFREIRKKFNKIDGVIHGAGVSGEGFIFRKEKEVFDNVIKPKIHGTWIMNQLTKDDQL 1338 Query: 578 DFFMLFSSVATLEGSPGQGDYIVGNGYLDGFAPY--LRRQGIRGTTLNWAVWEEVGMAVD 635 DFF++FSS+ +L GS GQ DY N Y+D F + L + T+NW W +VGM + Sbjct: 1339 DFFIMFSSITSLGGSMGQADYAAANAYMDSFEEFRSLVVPEQKTLTINWCGWNDVGMLAE 1398 Query: 636 Y------GVVTGGGICKPLKTHEAIAAFGQAIAMDRSQVMIGSLNLDMLAAVQESSFLRI 689 Y G K + + EAI F + I + S+V+IG ++ +L + I Sbjct: 1399 YIDKRKEEHKDNNGF-KTINSIEAIYTFDEIIQKEISKVIIGEIDYKVLGVHKGLIKFLI 1457 Query: 690 EAGLIRRLG--VPKQTVHDTFPFTITGRADGNYDDIEQAISRIWAETMHLPSVNIYSSFL 747 + +++R+ V K+ + + F D Y+ IE I ++W + + L + I F Sbjct: 1458 SSDILQRIDQTVSKEKISEEMNFVRVNHID--YNSIENKILKVWIKVLGLEQIGIDDKFY 1515 Query: 748 DIGGDSLIATQLLRKLEMEFPGILDLPDLFTYSSVAELSGYIKQQ 792 D+GGDS+ A L++++E EFP +D+ D+FTY S+ E++ YI+ + Sbjct: 1516 DLGGDSISAIYLMKEIEKEFPSRIDVSDIFTYPSIREMALYIESE 1560 >B8I5H5.1 B8I5H5_CLOCE Amino acid adenylation domain protein Length = 3695 Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust. Identities = 228/834 (27%), Positives = 418/834 (50%), Gaps = 46/834 (5%) Query: 1 LIAGESEGHQVHTLVEKQDSQFRLQIASRAIPGNAENHNEWSLNAEGKI--VPFQHTGAA 58 LI E +VHT++++ + IAS+ + + +W ++ G + +P + + Sbjct: 729 LILKADEEKEVHTIIKRDEDTLEYTIASKQ-----KENGQWLKHSTGAVAGIPKEDASSL 783 Query: 59 SVDIQQLQEKSEWEHIEPDFGSIVGRTAFGPRWNNIQQLSQSDDRVLVHVKLGERYAEDF 118 S D ++++E + GS G GPRW+ ++ + D L +LGE Y+ED Sbjct: 784 SFDFEKIKEACPNVIDIGNMGSREGILRLGPRWDTLKAMYTGDRMALACFELGEEYSEDL 843 Query: 119 SAYGYHPALLDTGLNAVTMFILRELYLPFSFKKFTFYDNMPDAFYSYLRKRAAGGENKET 178 S Y +P+L+D +N M + LYLP S+ Y+ +P +FYSYL ++ N E Sbjct: 844 SKYHMYPSLMDCAVNIANMSVGEGLYLPLSYGSLKIYETLPRSFYSYLVRKDNMSLNNEI 903 Query: 179 ISYDISLIDEQGNVFAEVENYTLKKVP----AAMVTKDLFHQLHWVK-EPRLPAGRNM-M 232 +DI L+DE G AE+E+Y++KKV A +LF++ W K E G N Sbjct: 904 AIFDIKLMDEYGKALAEIEDYSVKKVHNTGLEAEDPDNLFYKTGWEKQEQEFLTGENADF 963 Query: 233 DGAVLLFGDEXXXXXXXXXXXXXXXXKVIRVRHGETYSREQDSSYTVGNEEGDYQRLFAD 292 G ++F DE + + V G + + S Y G +EGD+++LF++ Sbjct: 964 SGVTIIFNDEYGMGEELAQKLRAAGTETVEVEFGIDFRQINHSKYMTGTDEGDFRKLFSE 1023 Query: 293 LQNRKVSRIIHCYALDAGGEASGLGHLQALQAKSIQSLFYIVKSLVQAKYKQAIDLVLLG 352 L R V+RII+ AL+ + G +A++ + + +L + K++ ++ + +DLV++ Sbjct: 1024 LNGRAVNRIIYLSALNFDTDMDIDGLDEAME-RGVYNLHRLTKAISES-MQNDLDLVIIA 1081 Query: 353 QYGFEITGHEEALEPCQTAFFNLGKAVAAEYPNVSCRSIDLDDQTAWAAILEEIEDGQNV 412 E+ ++E + + + +G+ + EY N+ CR ID+D I+ E+ + + Sbjct: 1082 DNASEVVEYQEKINALSGSLYAMGRVIGQEYDNIRCRCIDIDKAVDTDLIISELAQKKFL 1141 Query: 413 YQVAYRENERYVQEFGRYSGEPVSGQPLELQENGFYXXXXXXXXXXXEIARYLSSQNKIC 472 + V+YR +RY+Q R S G ++++E G Y EI RYL+++ ++ Sbjct: 1142 FNVSYRNGQRYIQNLQRQSPYSNGGDKIQIREEGVYIVAGGLGGIGLEICRYLAAEKRVN 1201 Query: 473 LGLLSRG-----------------GQNENDGKRNRRMEILEEIERSGSRVMVCPCDVTAE 515 L +++R G N+ D R++ ++E++ GS+V+ D+ Sbjct: 1202 LVMINRSPLPERSLWDDLLKNTYEGINDTDYNIIDRIQSIKELKDMGSKVLCFSADLADM 1261 Query: 516 QELAAGLDKLREAFGPVKGVIHAAGLAGSGFLFTKTWAEFCRVTKPKIEGTYLLHNLIK- 574 + LD++R+ + GVI+ AG+ G L K RV PK+ GT +L L + Sbjct: 1262 ASVRLVLDEVRKHHANINGVINLAGVFEEGILIKKDTEALKRVIAPKVNGTLILDRLTEN 1321 Query: 575 EPLDFFMLFSSVATLEGSPGQGDYIVGNGYLDGFAPYLRRQGIRGTTLNWAVWEEVGMAV 634 + LDFF++FSS+A+ G GQG+Y N ++D FA Y R G + ++NW W +VGMA Sbjct: 1322 DNLDFFVMFSSIASFIGGHGQGEYSAANAFMDSFAEYKNRTGRKVISINWTGWNQVGMAS 1381 Query: 635 DYGVVTGGGICKPLKTHEAIAAFGQAIAMDRSQVMIGSLNLDMLAA-VQESSFLR----I 689 Y + G I K + +AI AF +A+ +V+IG L+ + +A ++++++ I Sbjct: 1382 QYNLSDGRRIFKLISKEKAIKAFDRALTASLPRVVIGELDYEFMAEYAMDNAYIQLSQEI 1441 Query: 690 EAGLIRRLGVPKQTVHD-----TFPFTITGRADGNYDDIEQAISRIWAETMHLPSVNIYS 744 + L + +P+Q P GR + Y +E+ ++ +W E + L ++IY Sbjct: 1442 KNSLKPYIKMPQQVKQPGKRKIVLP---KGRQNQEYTPMEKGVAAVWGEVLGLEEIDIYE 1498 Query: 745 SFLDIGGDSLIATQLLRKLEMEFPGILDLPDLFTYSSVAELSGYIKQQRDRQQM 798 + ++GGDS+IA ++ ++ + + + DLF Y +V L+ +++ + +++ Sbjct: 1499 NLYNLGGDSIIALRIANEINKKLNASIRISDLFEYLTVQRLAAFLEDKTPEKEV 1552 >B8I5I0.1 B8I5I0_CLOCE Condensation domain protein Length = 2006 Score = 332 bits (852), Expect = 8e-89, Method: Compositional matrix adjust. Identities = 232/848 (27%), Positives = 396/848 (46%), Gaps = 49/848 (5%) Query: 1 LIAGESEGHQVHTLVEKQDSQFRLQIASRAIPGNAENHNEWSLNAEGKIVPFQHTGAASV 60 LI GE + ++HT++ K+ + IAS++ AEN W +A+G+I + Sbjct: 729 LIVGEEDKVELHTVIMKEYGFLKFVIASKS--KTAENG--WIEHAQGRIYGTEKLSDKYD 784 Query: 61 DIQQLQE-KSEWEHIEPDFGSIVGRTAFGPRWNNIQQLSQSDDRVLVHVKLGERYAEDFS 119 + LQ +EW+ ++V G RW + + + L +++LGE Y DF Sbjct: 785 MTEALQRCTNEWDIENKQKNAVV---EVGKRWQCLTKAFSGTNEALGYLELGEEYKGDFD 841 Query: 120 AYGYHPALLDTGLN-AVTMFILRELYLPFSFKKFTFYDNMPDAFYSYLRKRAAGGENKET 178 + HP +LDT LN A Y PF F ++ + S++R + T Sbjct: 842 EFQLHPPMLDTALNFAGDQAEKAGFYFPFHFNSVKIHNPISSKIISHVR---ILNNSDRT 898 Query: 179 ISYDISLIDEQGNVFAEVENYTLKKVPAAMVTK-DLFHQLHWVKEPRLPAGR--NMMDG- 234 I Y+I+L+DE V EV+ Y KK ++ K DL H + WV+ + +++DG Sbjct: 899 IEYNITLVDENRRVLMEVDRYVTKKDAGQLLNKTDLLHSIEWVEYSDTAQDKAFDLLDGN 958 Query: 235 -AVLLFGDEXXXXXXXXXXXXXXXXKVIRVRHGETYSREQDSSYTVGNEEGDYQRLFADL 293 + L F D+ KVI V GE Y Y+VG + D+ +LF+ Sbjct: 959 KSTLFFSDKSRSCNEIINRLEAKGIKVIEVNTGEEYGVLGKDKYSVGYSQEDFYQLFSQE 1018 Query: 294 QNRKVSRIIHCYALDAG-GEASGLGHLQALQAKSIQSLFYIVKSLVQAKYKQAIDLVLLG 352 + ++ I+ Y+ D+G + S + L+ S+ +LF + K+ +Q + I +V+L Sbjct: 1019 SIKDINYIV--YSPDSGLPDTSDIKILENKLENSVYNLFRLTKAWMQKNTGKDIKIVILS 1076 Query: 353 QYGFEITGHEEALEPCQTAFFNLGKAVAAEYPNVSCRSIDLDDQTAWAAILEEIEDGQNV 412 Y +TG+EE L P A F + + EYPN+ + ID+D+ +I+ E + Sbjct: 1077 TYVNSVTGNEECLNPENAALFGMAFVLKKEYPNLKIKCIDMDEGCEAESIISEFQTVHKT 1136 Query: 413 YQVAYRENERYVQEFGRYSGEPVSGQPLELQENGFYXXXXXXXXXXXEIARYLSSQNKIC 472 +A+R RY+++ R E ++++ENG Y EIA++++S + Sbjct: 1137 RMIAFRNGRRYIEQLKRVKREQNPSNSVKIRENGVYIITGGLGGIGLEIAKHMASGTNLN 1196 Query: 473 LGLLSRGG-----------QNENDGKRNRRMEILEEIERSGSRVMVCPCDVTAEQELAAG 521 + +++R + E D K +++ + +IE GS+V DV+ Q + Sbjct: 1197 VIMINRSEMPERSQWDTILETEKDLKLCNKIKSIMDIESLGSKVTYYNGDVSDMQSMKLI 1256 Query: 522 LDKLREAFGPVKGVIHAAGLAGSGFLFTKTWAEFCRVTKPKIEGTYLLHNLIKE-PLDFF 580 ++ + + +G + G+IH+AG+AG+G TK V K++GT+++ +L +DF Sbjct: 1257 IEDVIKNYGKINGIIHSAGIAGNGLAITKDEKRIKEVMAAKVKGTWIIDSLTSNLNMDFL 1316 Query: 581 MLFSSVATLEGSPGQGDYIVGNGYLDGFAPYLRRQGIRGTTLNWAVWEEVGMAVDYGVVT 640 +LFSS TL S GQ DY N Y+D + Y ++ +NWA W+E GMA ++ Sbjct: 1317 LLFSSAETLTTSAGQSDYTAANYYMDTYCYYRNKRNQPTFCINWAAWKETGMAKEHN-AD 1375 Query: 641 GGGICKPLKTHEAIAAFGQAIAMDRSQVMIGSLNLDMLAAVQESSFLRIEAGLIRRLGVP 700 G+ L T + F + + + +V+ G LN ++LA ++ES + +E L L Sbjct: 1376 RDGVFMVLSTANGVRVFDEVLKSGQPRVIAGQLNYNLLAGLKESLPVTLEPELSAVLDRS 1435 Query: 701 KQ----------TVHDTFPFTITGRADGNYDDIEQAISRIWAETMHLPSVNIYSSFLDIG 750 K+ T DT +TG+ D EQAI IWA +N+Y SF D G Sbjct: 1436 KKTRKSDIIAGTTKQDTVDIKLTGKTDDQITKTEQAIGYIWASIFQSNEINVYDSFYDQG 1495 Query: 751 GDSLIATQLLRKLEMEFPGILDLPDLFTYSSVAELSGYI------KQQRDRQQMKPAKSA 804 GDS+ A ++ + + + + D+ S+ EL YI +Q + + K+ Sbjct: 1496 GDSIFAMKITNVIRNTWGINISITDVMNNQSIYELGKYIDSEFAETKQASLKSLPIGKAE 1555 Query: 805 AADPVPPS 812 +D P S Sbjct: 1556 KSDYYPVS 1563 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.318 0.136 0.397 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 4,997,588,825 Number of extensions: 211951189 Number of successful extensions: 521256 Number of sequences better than 1.0e-05: 2180 Number of HSP's gapped: 517348 Number of HSP's successfully gapped: 2980 Length of query: 850 Length of database: 3,060,696,203 Length adjustment: 145 Effective length of query: 705 Effective length of database: 1,694,649,028 Effective search space: 1194727564740 Effective search space used: 1194727564740 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 136 (57.0 bits)