BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0486.0012.p (503 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B1DIU0.1 B1DIU0_9BACL ABC transporter related 757 0.0 C0Z4D1.1 C0Z4D1_BREBN Galactoside ABC transporter ATP-binding pr... 750 0.0 B3KCR1.1 B3KCR1_9BACI ABC transporter related 739 0.0 B1D851.1 B1D851_9BACL ABC transporter related 727 0.0 B7R6W9.1 B7R6W9_9THEO ABC transporter, ATP-binding protein 693 0.0 >B1DIU0.1 B1DIU0_9BACL ABC transporter related Length = 505 Score = 757 bits (1955), Expect = 0.0, Method: Compositional matrix adjust. Identities = 371/497 (74%), Positives = 417/497 (83%) Query: 6 FLLEMNNITKEFPGVKALDGVSLKVRPGSVHALMGENGAGKSTLMKCLFGIYSPDAGEIY 65 +LLEMNNITK FPGVKALD V+LKVRPG+VHALMGENGAGKSTLMKCLFGIY PDAGEI+ Sbjct: 7 YLLEMNNITKTFPGVKALDNVTLKVRPGTVHALMGENGAGKSTLMKCLFGIYHPDAGEIF 66 Query: 66 LDGEKASITNSNDALGHGISMIHQELHPVPFRNVMENIWLGRFPTKGFGPLQFIDHKKMF 125 L+G+KA I NS DAL G+SMIHQELHPVP R+VMENIWLGRFP G PL+FIDHKKM+ Sbjct: 67 LNGQKADIKNSKDALNSGVSMIHQELHPVPQRSVMENIWLGRFPMTGVRPLRFIDHKKMY 126 Query: 126 TDTENLFKDLDIDLHPETLVGKLSVSKIQSIEIAKAVSFHSRVIVMDEPTSSLTSVEVEH 185 DT LF+DL++D+ P LVG+LSVSKIQS+EIAKAVSF+SR+IVMDEPTSSLT EVEH Sbjct: 127 KDTAQLFEDLNMDIDPNQLVGELSVSKIQSLEIAKAVSFNSRIIVMDEPTSSLTGNEVEH 186 Query: 186 LFRIIRDLQKRGVAIIYISHKMEEILEISDEVTIMRDGKKIGTWPSAELTTDLIISRMVG 245 LF II L+ RGVAIIYISHKMEEIL ISD+VTIMRDGK IGTW S ELT D+II RMVG Sbjct: 187 LFAIINKLRARGVAIIYISHKMEEILRISDDVTIMRDGKYIGTWESKELTIDMIIQRMVG 246 Query: 246 RDLTNRFPERQNVPGEVFLKVEGLTSTEPRSFKDVSFELRRGEILGVGGLVGAQRTEVIE 305 RDL+ RFPER NVPGEV LKVEGLTS P SFKDVSFELR+GEILGVGGLVGAQRTE++E Sbjct: 247 RDLSERFPERTNVPGEVMLKVEGLTSILPHSFKDVSFELRKGEILGVGGLVGAQRTELME 306 Query: 306 ALFGLRXXXXXXXXXXXXXVNIQSPQDAKRHGLALLTEERRVTGIFPVLSVHENGAIANL 365 ALFGLR + I+SP DAK+H +ALLTEERRVTGIFPVL++ EN AIANL Sbjct: 307 ALFGLRSVKSGAIYKDGKQITIKSPIDAKKHKIALLTEERRVTGIFPVLNITENTAIANL 366 Query: 366 DHYKTPYFLLDGKKKKAEVDKMIEKLRTKTPTTKTQIMNLSGGNQQKVLLARWLLTEPEV 425 YK P+ L+ K + E K +EK RTKTP+ I NLSGGNQQKVLLARWLLT+P++ Sbjct: 367 GLYKGPFGFLNESKMRVEAKKGVEKFRTKTPSVNQLIRNLSGGNQQKVLLARWLLTDPDI 426 Query: 426 LLLDEPTRGIDVGAKFEIYSIIADLAKQGKSIIMISSEMPELLGMSDRVMVMSEGRLTGI 485 LLLDEPTRGID+GAK+EIY II +LAKQGKSIIMISSEMPEL+GMSDR+MVMSEGR TGI Sbjct: 427 LLLDEPTRGIDIGAKYEIYQIIIELAKQGKSIIMISSEMPELIGMSDRIMVMSEGRATGI 486 Query: 486 LEGDQATETEVMRLAAQ 502 L+G ATE +MRLAAQ Sbjct: 487 LDGKDATEQSIMRLAAQ 503 >C0Z4D1.1 C0Z4D1_BREBN Galactoside ABC transporter ATP-binding protein Length = 505 Score = 750 bits (1936), Expect = 0.0, Method: Compositional matrix adjust. Identities = 363/503 (72%), Positives = 419/503 (83%) Query: 1 MAKSQFLLEMNNITKEFPGVKALDGVSLKVRPGSVHALMGENGAGKSTLMKCLFGIYSPD 60 MA+ FLLEMN+I KEFPGVKALD V+LKVRPG+VHALMGENGAGKSTLMKCLFGIY PD Sbjct: 1 MAQQVFLLEMNHIHKEFPGVKALDDVTLKVRPGTVHALMGENGAGKSTLMKCLFGIYRPD 60 Query: 61 AGEIYLDGEKASITNSNDALGHGISMIHQELHPVPFRNVMENIWLGRFPTKGFGPLQFID 120 AGEI L+ E+ ++++S DAL HGISMIHQELHPVPFRNVMENIWLGRFP K GP F+D Sbjct: 61 AGEIVLNNEQVTMSSSKDALAHGISMIHQELHPVPFRNVMENIWLGRFPVKRIGPFSFVD 120 Query: 121 HKKMFTDTENLFKDLDIDLHPETLVGKLSVSKIQSIEIAKAVSFHSRVIVMDEPTSSLTS 180 KKM +DTE LF DL +DL+P +V LSVSK+QS+EIAKAVS+ S+VI+MDEPTSSLT Sbjct: 121 EKKMLSDTEKLFADLGMDLNPHAVVRDLSVSKVQSLEIAKAVSYRSKVIIMDEPTSSLTG 180 Query: 181 VEVEHLFRIIRDLQKRGVAIIYISHKMEEILEISDEVTIMRDGKKIGTWPSAELTTDLII 240 EVE LF IIR+L+ RGVAIIYISHKMEEIL I+D+VTIMRDGK IGTW +AELTTDLII Sbjct: 181 NEVEQLFAIIRELKSRGVAIIYISHKMEEILRIADDVTIMRDGKLIGTWRAAELTTDLII 240 Query: 241 SRMVGRDLTNRFPERQNVPGEVFLKVEGLTSTEPRSFKDVSFELRRGEILGVGGLVGAQR 300 S+MVGRDLT RFP R N PGE LKVEGLTS +SF+ VSFELR+GEILGVGGLVGAQR Sbjct: 241 SKMVGRDLTQRFPSRSNTPGEPILKVEGLTSPFSQSFQHVSFELRKGEILGVGGLVGAQR 300 Query: 301 TEVIEALFGLRXXXXXXXXXXXXXVNIQSPQDAKRHGLALLTEERRVTGIFPVLSVHENG 360 TE+IEALFGLR V I+SP+DAKR+ +ALLTEERRVTGI PVLS+ EN Sbjct: 301 TELIEALFGLRAVSSGKVSINGQEVRIKSPKDAKRYKMALLTEERRVTGIIPVLSILENT 360 Query: 361 AIANLDHYKTPYFLLDGKKKKAEVDKMIEKLRTKTPTTKTQIMNLSGGNQQKVLLARWLL 420 IANL Y+TP+ LL+ +K++A+V + IE LR KTP+ K I NLSGGNQQKVLLARWLL Sbjct: 361 VIANLASYQTPFLLLNERKRRADVSRSIEMLRVKTPSMKAMIKNLSGGNQQKVLLARWLL 420 Query: 421 TEPEVLLLDEPTRGIDVGAKFEIYSIIADLAKQGKSIIMISSEMPELLGMSDRVMVMSEG 480 T+P++LLLDEPTRG+DVGAK+EIY+II +LA QGK IIMISSEMPELLGMSDR+MVM EG Sbjct: 421 TDPDILLLDEPTRGVDVGAKYEIYTIITELASQGKGIIMISSEMPELLGMSDRIMVMCEG 480 Query: 481 RLTGILEGDQATETEVMRLAAQH 503 +L+G L G ATE E+MRLA +H Sbjct: 481 KLSGFLSGTTATEEEIMRLATKH 503 >B3KCR1.1 B3KCR1_9BACI ABC transporter related Length = 518 Score = 739 bits (1909), Expect = 0.0, Method: Compositional matrix adjust. Identities = 356/503 (70%), Positives = 419/503 (83%), Gaps = 1/503 (0%) Query: 1 MAKSQFLLEMNNITKEFPGVKALDGVSLKVRPGSVHALMGENGAGKSTLMKCLFGIYSPD 60 MA+S ++LEM NI+K FPGV+AL V+ KVRPG+VHALMGENGAGKSTLMKCLFGIY PD Sbjct: 1 MAES-YVLEMRNISKAFPGVQALSDVTFKVRPGTVHALMGENGAGKSTLMKCLFGIYKPD 59 Query: 61 AGEIYLDGEKASITNSNDALGHGISMIHQELHPVPFRNVMENIWLGRFPTKGFGPLQFID 120 G+IYL+G+K +I +S DAL HGISMIHQELHPVP RNVMENIWLGRFP +GF PL+F++ Sbjct: 60 EGDIYLNGDKVAINSSKDALNHGISMIHQELHPVPHRNVMENIWLGRFPMRGFWPLKFVN 119 Query: 121 HKKMFTDTENLFKDLDIDLHPETLVGKLSVSKIQSIEIAKAVSFHSRVIVMDEPTSSLTS 180 K+M DT LF++LDID+ P G LSVSKIQS+EI KAVS+HS+VIVMDEPTSSLT Sbjct: 120 EKQMAADTLRLFRELDIDIDPRARTGALSVSKIQSLEIVKAVSYHSKVIVMDEPTSSLTG 179 Query: 181 VEVEHLFRIIRDLQKRGVAIIYISHKMEEILEISDEVTIMRDGKKIGTWPSAELTTDLII 240 EVEHLF I+ L+ +GV+I+YISHKMEEIL ISD+VTIMRDGK +GTW + ELTTDLII Sbjct: 180 NEVEHLFSIMNRLRSQGVSIVYISHKMEEILRISDDVTIMRDGKYVGTWQAGELTTDLII 239 Query: 241 SRMVGRDLTNRFPERQNVPGEVFLKVEGLTSTEPRSFKDVSFELRRGEILGVGGLVGAQR 300 +RMVGRD+T R+PER N+PGE ++V L+ST P+SF++VSFELR+GEILG+GGLVGAQR Sbjct: 240 TRMVGRDMTERYPERTNIPGETRMQVRQLSSTNPKSFQNVSFELRKGEILGIGGLVGAQR 299 Query: 301 TEVIEALFGLRXXXXXXXXXXXXXVNIQSPQDAKRHGLALLTEERRVTGIFPVLSVHENG 360 TE++EALFGLR V I+SP DAK++ +ALLTEERRVTGIFPVLSV+EN Sbjct: 300 TELVEALFGLRPVASGTISINGKPVKIKSPSDAKKNNMALLTEERRVTGIFPVLSVYENT 359 Query: 361 AIANLDHYKTPYFLLDGKKKKAEVDKMIEKLRTKTPTTKTQIMNLSGGNQQKVLLARWLL 420 IANL Y+ FLL+ ++ + +EKLRTKTP+ TQI NLSGGNQQKVLLARWLL Sbjct: 360 VIANLRRYQNWAFLLNERRGIEDARTNVEKLRTKTPSVNTQIRNLSGGNQQKVLLARWLL 419 Query: 421 TEPEVLLLDEPTRGIDVGAKFEIYSIIADLAKQGKSIIMISSEMPELLGMSDRVMVMSEG 480 TEPE+LLLDEPTRGIDVGAKFEIYSII LA QGKSIIMISSEMPELLGMSDR+MVMSEG Sbjct: 420 TEPEILLLDEPTRGIDVGAKFEIYSIITQLATQGKSIIMISSEMPELLGMSDRIMVMSEG 479 Query: 481 RLTGILEGDQATETEVMRLAAQH 503 R+TGILEG +A+E E+MRLAAQ Sbjct: 480 RMTGILEGQEASEEEIMRLAAQQ 502 >B1D851.1 B1D851_9BACL ABC transporter related Length = 504 Score = 727 bits (1876), Expect = 0.0, Method: Compositional matrix adjust. Identities = 356/503 (70%), Positives = 416/503 (82%), Gaps = 1/503 (0%) Query: 1 MAKSQFLLEMNNITKEFPGVKALDGVSLKVRPGSVHALMGENGAGKSTLMKCLFGIYSPD 60 M S ++LEM ITKEFPGVKALD V++++RPG+VHALMGENGAGKSTLMKCLFGIY+PD Sbjct: 1 MMTSPYVLEMEGITKEFPGVKALDQVTIQIRPGTVHALMGENGAGKSTLMKCLFGIYTPD 60 Query: 61 AGEIYLDGEKASITNSNDALGHGISMIHQELHPVPFRNVMENIWLGRFPTKGFGPLQFID 120 AGEI L+GE+ ++ +S AL GI+MIHQELHPVP R+VMEN+WLGRFP +G P +F+D Sbjct: 61 AGEIRLNGEEINLPDSRSALDKGITMIHQELHPVPRRSVMENLWLGRFPMRGIQPFRFVD 120 Query: 121 HKKMFTDTENLFKDLDIDLHPETLVGKLSVSKIQSIEIAKAVSFHSRVIVMDEPTSSLTS 180 KKM+ DTE LFKDLD+D+ P+ +VG LSVSKIQSIEIAKAVS++++VI+MDEPTSSLT Sbjct: 121 GKKMYRDTEKLFKDLDMDIAPDQIVGDLSVSKIQSIEIAKAVSYNAKVIIMDEPTSSLTG 180 Query: 181 VEVEHLFRIIRDLQKRGVAIIYISHKMEEILEISDEVTIMRDGKKIGTWPSAELTTDLII 240 EVE LF+II DL+ RGV+IIYISHKMEEIL ISD+VTIMRDG+K+GTWP+ ELT DLII Sbjct: 181 NEVEQLFKIIEDLKARGVSIIYISHKMEEILRISDDVTIMRDGRKVGTWPAKELTMDLII 240 Query: 241 SRMVGRDLTNRFPERQNVPGEVFLKVEGLTSTEPRSFKDVSFELRRGEILGVGGLVGAQR 300 SRMVGRDLT RFP R+NVPGE LKVEGLTS +SFKD+SFELR+GEILG+GGLVGAQR Sbjct: 241 SRMVGRDLTQRFPVRENVPGETLLKVEGLTSPFVQSFKDISFELRQGEILGIGGLVGAQR 300 Query: 301 TEVIEALFGLRXXXXXXXXXXXXXVNIQSPQDAKRHGLALLTEERRVTGIFPVLSVHENG 360 TE++EALFGLR V I P DA R+ LALLTEERRVTGIFPVLSV EN Sbjct: 301 TELMEALFGLRSVSSGTIFLRGKRVKINRPTDAIRNKLALLTEERRVTGIFPVLSVLENT 360 Query: 361 AIANLDHYKTPYFLLDGKKKKAEVDKMIEKLRTKTPTTKTQIMNLSGGNQQKVLLARWLL 420 I+N Y Y L+ K++ + D+ I +L KTP+ KT I NLSGGNQQKVLLARWLL Sbjct: 361 VISNQKSY-VKYGWLNESKRREDTDRHINRLAVKTPSMKTLIRNLSGGNQQKVLLARWLL 419 Query: 421 TEPEVLLLDEPTRGIDVGAKFEIYSIIADLAKQGKSIIMISSEMPELLGMSDRVMVMSEG 480 T P++LLLDEPTRGIDVGAKFEIYSIIADLA GKSIIMISSEMPELLGMSDR+MVM EG Sbjct: 420 TRPDILLLDEPTRGIDVGAKFEIYSIIADLAAIGKSIIMISSEMPELLGMSDRIMVMCEG 479 Query: 481 RLTGILEGDQATETEVMRLAAQH 503 R+TGI+EG+ A E ++MRLAAQH Sbjct: 480 RVTGIVEGNTANEEQIMRLAAQH 502 >B7R6W9.1 B7R6W9_9THEO ABC transporter, ATP-binding protein Length = 505 Score = 693 bits (1789), Expect = 0.0, Method: Compositional matrix adjust. Identities = 328/503 (65%), Positives = 409/503 (81%) Query: 1 MAKSQFLLEMNNITKEFPGVKALDGVSLKVRPGSVHALMGENGAGKSTLMKCLFGIYSPD 60 MA ++F+LEMNNI+K+FPGVKALD V+ KVRPG+VHALMGENGAGKSTLMKCLFGIY PD Sbjct: 1 MASTEFILEMNNISKQFPGVKALDSVTFKVRPGTVHALMGENGAGKSTLMKCLFGIYQPD 60 Query: 61 AGEIYLDGEKASITNSNDALGHGISMIHQELHPVPFRNVMENIWLGRFPTKGFGPLQFID 120 GEI L+G+K SI N +AL HGISMIHQELHPV RNVMEN+W+GR P K +G ++F+D Sbjct: 61 EGEIILNGKKISIKNPKEALDHGISMIHQELHPVRERNVMENVWIGRLPLKKYGIVKFVD 120 Query: 121 HKKMFTDTENLFKDLDIDLHPETLVGKLSVSKIQSIEIAKAVSFHSRVIVMDEPTSSLTS 180 +KM+ +TE LFK L ID+ P LV LS SKIQ IEIAKAVS+++++I+MDEPTSSLT Sbjct: 121 ERKMYRETEELFKKLQIDVQPTELVKNLSASKIQYIEIAKAVSYNAKIIIMDEPTSSLTE 180 Query: 181 VEVEHLFRIIRDLQKRGVAIIYISHKMEEILEISDEVTIMRDGKKIGTWPSAELTTDLII 240 EV HLF +IR L+K GV++IYISH+++EI EI+DEVTIMRDGK +GTW EL D+II Sbjct: 181 NEVSHLFTLIRSLKKEGVSVIYISHRIDEIFEIADEVTIMRDGKVVGTWDVKELAEDMII 240 Query: 241 SRMVGRDLTNRFPERQNVPGEVFLKVEGLTSTEPRSFKDVSFELRRGEILGVGGLVGAQR 300 SRMVGR+++NRFP R + PGEV LKVE LTS PRSFK+VSFELR+GEILG+GGLVG+QR Sbjct: 241 SRMVGREMSNRFPPRVSEPGEVILKVENLTSPIPRSFKNVSFELRKGEILGIGGLVGSQR 300 Query: 301 TEVIEALFGLRXXXXXXXXXXXXXVNIQSPQDAKRHGLALLTEERRVTGIFPVLSVHENG 360 TE++EA+FGLR I+SP DAK++GLALLTEERR TGIFP L++ EN Sbjct: 301 TELVEAIFGLRSVAAGKIFIKGEEAVIRSPIDAKKYGLALLTEERRATGIFPELNIIENT 360 Query: 361 AIANLDHYKTPYFLLDGKKKKAEVDKMIEKLRTKTPTTKTQIMNLSGGNQQKVLLARWLL 420 +AN+ Y + LL+ KK+K + +M++ LR KTP+ K I NLSGGNQQKVLL RWLL Sbjct: 361 TVANIYQYVGKFLLLNDKKRKDDTKRMVDILRIKTPSLKALIKNLSGGNQQKVLLGRWLL 420 Query: 421 TEPEVLLLDEPTRGIDVGAKFEIYSIIADLAKQGKSIIMISSEMPELLGMSDRVMVMSEG 480 T P++L+LDEPTRGIDVGAK+EIY+I+ +L +QGKSIIMISSEMPELLGM+DR++VM EG Sbjct: 421 TSPDILILDEPTRGIDVGAKYEIYTIMNELTQQGKSIIMISSEMPELLGMADRILVMCEG 480 Query: 481 RLTGILEGDQATETEVMRLAAQH 503 R++GIL D+ATE ++MRLA+++ Sbjct: 481 RVSGILNRDEATEEQIMRLASKY 503 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.318 0.136 0.384 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,770,730,720 Number of extensions: 113301446 Number of successful extensions: 752001 Number of sequences better than 1.0e-05: 76699 Number of HSP's gapped: 650715 Number of HSP's successfully gapped: 114924 Length of query: 503 Length of database: 3,060,696,203 Length adjustment: 140 Effective length of query: 363 Effective length of database: 1,741,754,103 Effective search space: 632256739389 Effective search space used: 632256739389 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 133 (55.8 bits)