BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0486.0005.p (154 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3K6Z9.1 B3K6Z9_9BACI GCN5-related N-acetyltransferase 169 5e-41 C3BL30.1 C3BL30_9BACI Acetyltransferase, GNAT family 115 9e-25 Q733X6.1 Q733X6_BACC1 Acetyltransferase, GNAT family protein 115 1e-24 C2SN37.1 C2SN37_BACCE Acetyltransferase, GNAT 102 1e-20 C3B496.1 C3B496_BACMY Acetyltransferase, GNAT family 100 3e-20 >B3K6Z9.1 B3K6Z9_9BACI GCN5-related N-acetyltransferase Length = 153 Score = 169 bits (429), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 83/144 (57%), Positives = 104/144 (72%), Gaps = 2/144 (1%) Query: 10 LQIRKCGLNDLERVTALLREFGYPTTLSVMKERMEDMETDPFHCTLVAELDNEVVGMVGL 69 L IR NDLE VT+L+RE YPTTL+VM+ERME M +P + LVAE+D +VVGM+ L Sbjct: 12 LLIRNFEKNDLEAVTSLMRELNYPTTLNVMRERMESMNDNPLYGNLVAEVDGDVVGMIML 71 Query: 70 RKVRSYYKQADCITEITALIVAEELRGNGLGKRLVAAAEEWARQKGCCELFLRSGNRVER 129 R+V+S+ + +T+IT++IV RG G+GKRL+ AE W RQ G LFL SGNR E Sbjct: 72 RQVKSF-TMTEPVTQITSVIVTSSYRGQGIGKRLIRGAETWGRQHGSHLLFLTSGNREEL 130 Query: 130 APAHAFYRHIGFEKTAGYRFNKSL 153 APAHAFY HIGFEK AGY+F+K L Sbjct: 131 APAHAFYEHIGFEK-AGYQFSKKL 153 >C3BL30.1 C3BL30_9BACI Acetyltransferase, GNAT family Length = 143 Score = 115 bits (289), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 60/139 (43%), Positives = 90/139 (64%), Gaps = 2/139 (1%) Query: 10 LQIRKCGLNDLERVTALLREFGYPTTLSVMKERMEDMETDPFHCTLVAELDNEVVGMVGL 69 ++IRK L+D+ +T+L+ GYPTT+ MK R++++ + P + TLVAE + V+GM+GL Sbjct: 1 MEIRKAHLDDVHDLTSLMGHLGYPTTIGKMKVRLQNIFSHPDYYTLVAEENERVIGMIGL 60 Query: 70 RKVRSYYKQADCITEITALIVAEELRGNGLGKRLVAAAEEWARQKGCCELFLRSGNRVER 129 Y + T I AL+V EE R G+GK L+ AAE+WA ++G + L SGNR ER Sbjct: 61 -CTGILYTEDGIYTRIIALVVDEEFRNQGIGKSLIEAAEKWAMEQGIDSICLNSGNREER 119 Query: 130 APAHAFYRHIGF-EKTAGY 147 AH FY+ +G+ EK+ G+ Sbjct: 120 HHAHQFYKCMGYVEKSTGF 138 >Q733X6.1 Q733X6_BACC1 Acetyltransferase, GNAT family protein Length = 144 Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 55/144 (38%), Positives = 91/144 (63%), Gaps = 2/144 (1%) Query: 10 LQIRKCGLNDLERVTALLREFGYPTTLSVMKERMEDMETDPFHCTLVAELDNEVVGMVGL 69 ++IRK +D+++ T L+ + GYP++L MK RM+ +E++P + T VA DN +VGM+G+ Sbjct: 1 MEIRKYNSDDIKQFTDLMPDLGYPSSLDEMKVRMQRIESNPNYYTFVAINDNNLVGMIGI 60 Query: 70 RKVRSYYKQADCITEITALIVAEELRGNGLGKRLVAAAEEWARQKGCCELFLRSGNRVER 129 + + Y D +IT+L+ +E RG G+ K L+ EEW+ ++G ++L SG +R Sbjct: 61 -TIHTTYTNNDEKIQITSLVTKKEYRGQGIAKALIKYVEEWSLKRGSNFIYLLSGKSEQR 119 Query: 130 APAHAFYRHIGFEKTAGYRFNKSL 153 AH Y+ +G+E T GYRF K + Sbjct: 120 IKAHELYKFLGYEIT-GYRFVKRM 142 >C2SN37.1 C2SN37_BACCE Acetyltransferase, GNAT Length = 131 Score = 102 bits (254), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 49/127 (38%), Positives = 79/127 (62%), Gaps = 2/127 (1%) Query: 27 LREFGYPTTLSVMKERMEDMETDPFHCTLVAELDNEVVGMVGLRKVRSYYKQADCITEIT 86 + + GYP++L MK RM+ +E++P + T VA DN +VGM+G+ + + Y D +IT Sbjct: 1 MPDLGYPSSLDEMKVRMQRIESNPNYYTFVAINDNNLVGMIGI-TIHTTYTNNDEKIQIT 59 Query: 87 ALIVAEELRGNGLGKRLVAAAEEWARQKGCCELFLRSGNRVERAPAHAFYRHIGFEKTAG 146 +L+ +E RG G+ K L+ EEW+ ++G ++L SG +R AH Y+ +G+E T G Sbjct: 60 SLVTKKEYRGQGIAKALIKYVEEWSLKRGSNFIYLLSGKSEQRIKAHELYKFLGYEIT-G 118 Query: 147 YRFNKSL 153 YRF K + Sbjct: 119 YRFVKRM 125 >C3B496.1 C3B496_BACMY Acetyltransferase, GNAT family Length = 126 Score = 100 bits (250), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 52/122 (42%), Positives = 77/122 (63%), Gaps = 2/122 (1%) Query: 27 LREFGYPTTLSVMKERMEDMETDPFHCTLVAELDNEVVGMVGLRKVRSYYKQADCITEIT 86 + GYPTT+ MK R++++ + P++ TLVAE + V+GM+GL Y + I Sbjct: 1 MGHLGYPTTIEKMKVRLQNIFSHPYYYTLVAEENERVIGMIGL-CTGILYTEDGIYARII 59 Query: 87 ALIVAEELRGNGLGKRLVAAAEEWARQKGCCELFLRSGNRVERAPAHAFYRHIGF-EKTA 145 AL+V EE R G+GK L+ AAE+WA ++G + L SGNR ER AH FY+ +G+ EK+ Sbjct: 60 ALVVDEEFRNQGIGKSLIEAAEKWAMEQGIDSICLNSGNREERHHAHQFYKCMGYVEKST 119 Query: 146 GY 147 G+ Sbjct: 120 GF 121 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.322 0.136 0.398 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 855,494,752 Number of extensions: 31306296 Number of successful extensions: 83561 Number of sequences better than 1.0e-05: 311 Number of HSP's gapped: 83863 Number of HSP's successfully gapped: 311 Length of query: 154 Length of database: 3,060,696,203 Length adjustment: 116 Effective length of query: 38 Effective length of database: 1,967,858,463 Effective search space: 74778621594 Effective search space used: 74778621594 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 125 (52.8 bits)