BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0479.0005.p (640 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KGB2.1 B3KGB2_9BACI ABC transporter related 511 e-142 C3BET6.1 C3BET6_9BACI ABC transporter ATP-binding protein uup 473 e-131 C3AYC1.1 C3AYC1_BACMY ABC transporter ATP-binding protein uup 470 e-130 C3AGI7.1 C3AGI7_BACMY ABC transporter ATP-binding protein uup 466 e-129 B7JLC2.1 B7JLC2_BACC0 ABC transporter, ATP-binding protein 465 e-129 >B3KGB2.1 B3KGB2_9BACI ABC transporter related Length = 653 Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust. Identities = 276/650 (42%), Positives = 391/650 (60%), Gaps = 18/650 (2%) Query: 2 IISCQNVQKYHGAQLVLSDITFDIRQGEKIGLIGRNGCGKTTLFHLLSGEERPDQGQISI 61 +I+ Q + +YHGAQLVL ITF+I++GEK+ LIGRNG GK+TL LL+G ++P++GQ++I Sbjct: 3 MINVQKLTQYHGAQLVLDGITFEIQEGEKVALIGRNGSGKSTLMRLLAGLDQPNEGQLAI 62 Query: 62 RKGSIVGLLAQIQEVNDGETVYAVLQRSFAEPLEWQARLRELELAMSQPDAGSSGLTFER 121 +K +++G + QI D TV VL E++A + ELE MS P + +R Sbjct: 63 KKDTVIGYVEQIPSHMDSWTVLDVLSHGLIHLKEYRAEMTELEKRMSDPGIAGNAELLDR 122 Query: 122 LLKEYGTLQEKFEAAGGYEIEASIQRVAAGLGIGTGQFDRRFSSLSGGEKTKVGXXXXXX 181 +L+ Y LQE+FEA GGYE+EASI ++A GL I ++ F SLSGGE+T+V Sbjct: 123 VLRRYSALQERFEAEGGYELEASIDKIATGLQIPKSEYGLAFGSLSGGEQTRVVLASQLI 182 Query: 182 XXXXXXXXXXXTNHLDMEAIEWLEQFLQDYEGTVVAISHDRYFLDAVVKKVIEIEDGEAF 241 TNHLD+ EWLE+FL++Y GT V ISHDRYFLD VV K +E+EDGEAF Sbjct: 183 VQPDLLLLDEPTNHLDLARTEWLEEFLREYPGTCVIISHDRYFLDRVVTKTVELEDGEAF 242 Query: 242 TFHTNYSGYQIEKEARLLRQFADYXXXXXXXXXXXXXXXRLIEWGNRSNPPNPSFHRRAA 301 + Y+ + +KE RLL+QFADY +L E+G N F +RAA Sbjct: 243 SAQGGYTAFMKDKEERLLQQFADYQEQQKVIKKMKESIKQLEEFGRIGG--NEKFFKRAA 300 Query: 302 SMQKALDRMVKVKRPVLERKAMDLQLQQEDRTGNQVVILDRIGKSYGDRTLFSGANEVLR 361 SM++AL+RM KVKRPVLER+ D +L +DR+G +V +++ YG++ + GA+ ++ Sbjct: 301 SMRRALERMEKVKRPVLERRQADFELHPQDRSGRRVAYFEQVEVRYGNQAVLGGASGLIE 360 Query: 362 YGETTALIGGNGAGKSTLLRIILGQELPDEGSCILASRAVVGYLAQEAVPEDGKLSVLRY 421 +GE AL+G NG+GK+TL ++++G+ +PD GS +R VGYLAQ+ P+ K +VL+Y Sbjct: 361 FGEKIALMGPNGSGKTTLFKVMVGELMPDSGSLEWGARVDVGYLAQQEEPKIPKETVLQY 420 Query: 422 FXXXXXXXXXXXXXXXXRFLFYGSDVFKNIANLSGGEWTRLRFAVLMHRRPNLLILDEPT 481 F R+LFYG+ VF+++ LSGGEWTRLR A+L+H++PNLL+LDEPT Sbjct: 421 FRENAGVEEGEARGILARYLFYGAAVFRSVGQLSGGEWTRLRLALLIHQKPNLLLLDEPT 480 Query: 482 NHLDIDSREALEEALEEYPGTVLAVSHDRYFINRCFGKLWSIAEGRFTVFSGNX---XXX 538 NHLDI SREALE+AL+ Y GTVLA+SHDRYF+N+ GK+W + +G TVF GN Sbjct: 481 NHLDIASREALEDALQGYQGTVLAISHDRYFVNQVSGKVWDLNQGTLTVFHGNYDDFRAK 540 Query: 539 XXXXXXXXXXXGLSSDSGKRLLQPDNAPKSASS----------PSEGKPRPSGYWEERIA 588 LS+ + L + P A+ P S + EE IA Sbjct: 541 KDQLEAALQSRELSAGTNAVSLPRETPPSKANEKPGQKFERNHPDRSAAERSKWLEEEIA 600 Query: 589 TAEEQLGSIDAEM-LDPQISSDADR--LAELQLLRDAAQEKLDELYACWM 635 E ++ +D + + IS ++D L E R++ DEL A W+ Sbjct: 601 RLETRIRQLDGWLETEGSISGNSDMSLLEERWNERESLAASRDELLAEWL 650 >C3BET6.1 C3BET6_9BACI ABC transporter ATP-binding protein uup Length = 624 Score = 473 bits (1217), Expect = e-131, Method: Compositional matrix adjust. Identities = 253/533 (47%), Positives = 340/533 (63%), Gaps = 5/533 (0%) Query: 2 IISCQNVQKYHGAQLVLSDITFDIRQGEKIGLIGRNGCGKTTLFHLLSGEERPDQGQISI 61 I S NV K G ++ +I+ +I+ GE+IGL+GRNG GKTT+F LL+G E D G I + Sbjct: 3 ICSVNNVTKSFGGNIIFENISLEIQNGERIGLVGRNGSGKTTIFQLLTGIENVDAGVIHM 62 Query: 62 RKGSIVGLLAQIQEVNDGETVYAVLQRSFAEPLEWQARLRELELAMSQPDAGSSGLTFER 121 +KG+ VG +AQI + VY VL +F + E + +R LE +M++ +S ER Sbjct: 63 KKGTRVGHVAQIPKFAGETNVYDVLSAAFVKEKELERNMRNLEKSMAEEHDPTS---LER 119 Query: 122 LLKEYGTLQEKFEAAGGYEIEASIQRVAAGLGIGTGQFDRRFSSLSGGEKTKVGXXXXXX 181 L+++YG +QE+F GGYEIEA+I +VA GL I T F R F+ LSGGE+TKV Sbjct: 120 LMEKYGAVQEQFSFLGGYEIEANIMKVANGLQI-TELFSRIFAELSGGEQTKVSLAYMLL 178 Query: 182 XXXXXXXXXXXTNHLDMEAIEWLEQFLQDYEGTVVAISHDRYFLDAVVKKVIEIEDGEAF 241 TNHLD+ A+EWLEQFL++Y GTVV ISHDRYFLD VV K+ ++EDGE Sbjct: 179 KKPDLLLLDEPTNHLDLFAVEWLEQFLKEYTGTVVVISHDRYFLDEVVTKIFDLEDGELH 238 Query: 242 TFHTNYSGYQIEKEARLLRQFADYXXXXXXXXXXXXXXXRLIEWGNRSNPPNPSFHRRAA 301 +HTNYS + EKE RLL++F Y RL EW N++NPPN H+RA Sbjct: 239 VYHTNYSQFVKEKEERLLQEFQSYQEQQKKIKKMKEAIKRLREWANQANPPNEGLHKRAR 298 Query: 302 SMQKALDRMVKVKRPVLERKAMDLQLQQEDRTGNQVVILDRIGKSYGDRTLFSGANEVLR 361 +M++AL+RM K+K+P+LERK M LQ + ++R+G VV++ +GK++ +R LF GAN +R Sbjct: 299 NMERALERMEKLKKPILERKQMGLQFEGQERSGKDVVVMKEVGKNFAERILFEGANLHVR 358 Query: 362 YGETTALIGGNGAGKSTLLRIILGQELPDEGSCILASRAVVGYLAQEAVPEDGKLSVLRY 421 + E A++G NG GK+TLL+++L + PD G + S +GYL+Q A E+ K VL Sbjct: 359 FQERAAIVGRNGTGKTTLLKLLLEEMKPDAGEIRIGSSVKIGYLSQHAY-ENVKYDVLEA 417 Query: 422 FXXXXXXXXXXXXXXXXRFLFYGSDVFKNIANLSGGEWTRLRFAVLMHRRPNLLILDEPT 481 F RFLFYG VFK + LSGGE RLR A LM++ N L+LDEPT Sbjct: 418 FREHVAVTEGEARHILARFLFYGPAVFKKVNQLSGGERMRLRLAQLMYQDINFLVLDEPT 477 Query: 482 NHLDIDSREALEEALEEYPGTVLAVSHDRYFINRCFGKLWSIAEGRFTVFSGN 534 NHLDI+SRE LEEALE+Y GT+LAVSHDRYF+N+ F K + I E F+GN Sbjct: 478 NHLDIESREVLEEALEQYNGTILAVSHDRYFLNKLFEKTYWIDEHTLFEFAGN 530 Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 68/247 (27%), Positives = 109/247 (44%), Gaps = 48/247 (19%) Query: 2 IISCQNVQKYHGAQLVLSDITFDIRQGEKIGLIGRNGCGKTTLFHLLSGEERPDQGQISI 61 ++ + V K +++ +R E+ ++GRNG GKTTL LL E +PD G+I I Sbjct: 334 VVVMKEVGKNFAERILFEGANLHVRFQERAAIVGRNGTGKTTLLKLLLEEMKPDAGEIRI 393 Query: 62 RKGSIVGLLAQIQEVNDGETVYAVLQRSFAEPLEWQARLRELELAMSQPDAGSSGLTFER 121 +G L+Q N Y VL+ +F E +A+++ +A Sbjct: 394 GSSVKIGYLSQHAYEN---VKYDVLE-AFRE-----------HVAVTEGEARHI------ 432 Query: 122 LLKEYGTLQEKFEAAGGYEIEASIQRVAAGLGIGTGQFDRRFSSLSGGEKTKVGXXXXXX 181 +A L G F ++ + LSGGE+ ++ Sbjct: 433 --------------------------LARFLFYGPAVF-KKVNQLSGGERMRLRLAQLMY 465 Query: 182 XXXXXXXXXXXTNHLDMEAIEWLEQFLQDYEGTVVAISHDRYFLDAVVKKVIEIEDGEAF 241 TNHLD+E+ E LE+ L+ Y GT++A+SHDRYFL+ + +K I++ F Sbjct: 466 QDINFLVLDEPTNHLDIESREVLEEALEQYNGTILAVSHDRYFLNKLFEKTYWIDEHTLF 525 Query: 242 TFHTNYS 248 F NY+ Sbjct: 526 EFAGNYA 532 >C3AYC1.1 C3AYC1_BACMY ABC transporter ATP-binding protein uup Length = 656 Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust. Identities = 252/533 (47%), Positives = 340/533 (63%), Gaps = 5/533 (0%) Query: 2 IISCQNVQKYHGAQLVLSDITFDIRQGEKIGLIGRNGCGKTTLFHLLSGEERPDQGQISI 61 I S NV K G ++ +I+ +I+ GE+IGL+GRNG GKTT+F LL+G E D G I + Sbjct: 35 ICSVNNVTKSFGGNIIFENISLEIKNGERIGLVGRNGSGKTTIFQLLTGIENVDAGAIHM 94 Query: 62 RKGSIVGLLAQIQEVNDGETVYAVLQRSFAEPLEWQARLRELELAMSQPDAGSSGLTFER 121 +KG+ VG +AQI + VY VL +F + E + +R LE +M++ +S ER Sbjct: 95 KKGTRVGHVAQIPKFAGETNVYDVLSAAFVKEKELERNMRNLEKSMAEEHDPTS---LER 151 Query: 122 LLKEYGTLQEKFEAAGGYEIEASIQRVAAGLGIGTGQFDRRFSSLSGGEKTKVGXXXXXX 181 L+++YG +QE+F GGYEIEA+I +VA GL I T F R F+ LSGGE+TKV Sbjct: 152 LMEKYGAVQEQFSFLGGYEIEANIMKVANGLQI-TELFSRIFAELSGGEQTKVSLAYMLL 210 Query: 182 XXXXXXXXXXXTNHLDMEAIEWLEQFLQDYEGTVVAISHDRYFLDAVVKKVIEIEDGEAF 241 TNHLD+ A+EWLEQFL++Y GTVV ISHDRYFLD VV K+ ++EDGE Sbjct: 211 KKPDLLLLDEPTNHLDLFAVEWLEQFLKEYTGTVVVISHDRYFLDEVVTKIFDLEDGEIH 270 Query: 242 TFHTNYSGYQIEKEARLLRQFADYXXXXXXXXXXXXXXXRLIEWGNRSNPPNPSFHRRAA 301 +HTNYS + EKE RLL++F Y RL EW N++NPPN H+RA Sbjct: 271 VYHTNYSQFVKEKEERLLQEFQSYQEQQKKIKKMKEAIKRLREWANQANPPNEGLHKRAR 330 Query: 302 SMQKALDRMVKVKRPVLERKAMDLQLQQEDRTGNQVVILDRIGKSYGDRTLFSGANEVLR 361 +M++AL+RM K+K+P+LERK M LQ + ++R+G V+++ +GK++ R LF GAN +R Sbjct: 331 NMERALERMEKLKKPILERKQMGLQFEGQERSGKDVIVMKEVGKNFAGRILFEGANLHVR 390 Query: 362 YGETTALIGGNGAGKSTLLRIILGQELPDEGSCILASRAVVGYLAQEAVPEDGKLSVLRY 421 + E A++G NG GK+TLL+++L + PD G + S +GYL+Q A + K +VL Sbjct: 391 FQERAAIVGRNGTGKTTLLKLLLEEMKPDVGEIRIGSSVKIGYLSQHAYG-NVKTNVLEA 449 Query: 422 FXXXXXXXXXXXXXXXXRFLFYGSDVFKNIANLSGGEWTRLRFAVLMHRRPNLLILDEPT 481 F RFLFYG VFK + LSGGE RLR A LM++ NLL+LDEPT Sbjct: 450 FREHVAVTEGEARHILARFLFYGPAVFKKVNQLSGGERMRLRLAQLMYQDVNLLVLDEPT 509 Query: 482 NHLDIDSREALEEALEEYPGTVLAVSHDRYFINRCFGKLWSIAEGRFTVFSGN 534 NHLDI+SRE LEEALE+Y GT+LAVSHDRYF+N+ F K + I E F+GN Sbjct: 510 NHLDIESREVLEEALEQYNGTILAVSHDRYFLNKLFEKTYWIDEHTLFEFAGN 562 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 32/88 (36%), Positives = 51/88 (57%) Query: 161 RRFSSLSGGEKTKVGXXXXXXXXXXXXXXXXXTNHLDMEAIEWLEQFLQDYEGTVVAISH 220 ++ + LSGGE+ ++ TNHLD+E+ E LE+ L+ Y GT++A+SH Sbjct: 477 KKVNQLSGGERMRLRLAQLMYQDVNLLVLDEPTNHLDIESREVLEEALEQYNGTILAVSH 536 Query: 221 DRYFLDAVVKKVIEIEDGEAFTFHTNYS 248 DRYFL+ + +K I++ F F NY+ Sbjct: 537 DRYFLNKLFEKTYWIDEHTLFEFAGNYA 564 >C3AGI7.1 C3AGI7_BACMY ABC transporter ATP-binding protein uup Length = 656 Score = 466 bits (1198), Expect = e-129, Method: Compositional matrix adjust. Identities = 251/533 (47%), Positives = 338/533 (63%), Gaps = 5/533 (0%) Query: 2 IISCQNVQKYHGAQLVLSDITFDIRQGEKIGLIGRNGCGKTTLFHLLSGEERPDQGQISI 61 I S NV K G ++ +I+ +I+ GE+IGL+GRNG GKTT+F LL+G E D G I + Sbjct: 35 ICSVNNVTKSFGGNIIFENISLEIKNGERIGLVGRNGSGKTTIFQLLTGIENVDAGAIHM 94 Query: 62 RKGSIVGLLAQIQEVNDGETVYAVLQRSFAEPLEWQARLRELELAMSQPDAGSSGLTFER 121 +KG+ VG +AQI + VY VL +F + E + +R LE M++ +S ER Sbjct: 95 KKGTRVGHVAQIPKFAGETNVYDVLSAAFVKEKELERNMRNLEKRMAEEHDPTS---LER 151 Query: 122 LLKEYGTLQEKFEAAGGYEIEASIQRVAAGLGIGTGQFDRRFSSLSGGEKTKVGXXXXXX 181 L+++YG +QE+F GGYEIEA+I +VA GL I T F R F+ LSGGE+TKV Sbjct: 152 LMEKYGAVQEQFSFLGGYEIEANIMKVANGLQI-TELFSRIFAELSGGEQTKVSLAYMLL 210 Query: 182 XXXXXXXXXXXTNHLDMEAIEWLEQFLQDYEGTVVAISHDRYFLDAVVKKVIEIEDGEAF 241 TNHLD+ A+EWLEQFL++Y TVV ISHDRYFLD VV K+ ++EDGE Sbjct: 211 KKPDLLLLDEPTNHLDLFAVEWLEQFLKEYTRTVVVISHDRYFLDEVVTKIFDLEDGEIH 270 Query: 242 TFHTNYSGYQIEKEARLLRQFADYXXXXXXXXXXXXXXXRLIEWGNRSNPPNPSFHRRAA 301 +HTNYS + EKE RLL++F Y RL EW N++NPPN H+RA Sbjct: 271 VYHTNYSQFVKEKEERLLQEFQSYQEQQKKIKKMKEAIKRLREWANQANPPNEGLHKRAR 330 Query: 302 SMQKALDRMVKVKRPVLERKAMDLQLQQEDRTGNQVVILDRIGKSYGDRTLFSGANEVLR 361 +M++AL+RM K+K+P+LERK M LQ + ++R+G V+++ +GK++ R LF GAN +R Sbjct: 331 NMERALERMEKLKKPILERKQMGLQFEGQERSGKDVIVMKEVGKNFAGRILFEGANLHVR 390 Query: 362 YGETTALIGGNGAGKSTLLRIILGQELPDEGSCILASRAVVGYLAQEAVPEDGKLSVLRY 421 + E A++G NG GK+TLL+++L + PD G + S +GYL+Q A + K +VL Sbjct: 391 FQERAAIVGRNGTGKTTLLKLLLEEMKPDVGEIRIGSSVKIGYLSQHAYG-NVKTNVLEA 449 Query: 422 FXXXXXXXXXXXXXXXXRFLFYGSDVFKNIANLSGGEWTRLRFAVLMHRRPNLLILDEPT 481 F RFLFYG VFK + LSGGE RLR A LM++ NLL+LDEPT Sbjct: 450 FREHVAVTEGEARHILARFLFYGPAVFKKVNQLSGGERMRLRLAQLMYQDVNLLVLDEPT 509 Query: 482 NHLDIDSREALEEALEEYPGTVLAVSHDRYFINRCFGKLWSIAEGRFTVFSGN 534 NHLDI+SRE LEEALE+Y GT+LAVSHDRYF+N+ F K + I E F+GN Sbjct: 510 NHLDIESREVLEEALEQYNGTILAVSHDRYFLNKLFEKTYWIDEHTLFEFAGN 562 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 32/88 (36%), Positives = 51/88 (57%) Query: 161 RRFSSLSGGEKTKVGXXXXXXXXXXXXXXXXXTNHLDMEAIEWLEQFLQDYEGTVVAISH 220 ++ + LSGGE+ ++ TNHLD+E+ E LE+ L+ Y GT++A+SH Sbjct: 477 KKVNQLSGGERMRLRLAQLMYQDVNLLVLDEPTNHLDIESREVLEEALEQYNGTILAVSH 536 Query: 221 DRYFLDAVVKKVIEIEDGEAFTFHTNYS 248 DRYFL+ + +K I++ F F NY+ Sbjct: 537 DRYFLNKLFEKTYWIDEHTLFEFAGNYA 564 >B7JLC2.1 B7JLC2_BACC0 ABC transporter, ATP-binding protein Length = 626 Score = 465 bits (1197), Expect = e-129, Method: Compositional matrix adjust. Identities = 251/533 (47%), Positives = 339/533 (63%), Gaps = 5/533 (0%) Query: 2 IISCQNVQKYHGAQLVLSDITFDIRQGEKIGLIGRNGCGKTTLFHLLSGEERPDQGQISI 61 I S NV K G ++ +I+ +I+ GE++GL+GRNG GKTT+F LL+G E D G I + Sbjct: 3 ICSVNNVTKSFGGNIIFENISLEIKNGERVGLVGRNGSGKTTIFQLLTGMESLDAGAIHM 62 Query: 62 RKGSIVGLLAQIQEVNDGETVYAVLQRSFAEPLEWQARLRELELAMSQPDAGSSGLTFER 121 +KG+ +G +AQI + ++ TVY VL +F E + +R LE M++ + GSS L ++ Sbjct: 63 KKGTRIGHVAQIPKFDESMTVYEVLSSAFKIEKELEREMRTLEKDMAE-EQGSSVL--QK 119 Query: 122 LLKEYGTLQEKFEAAGGYEIEASIQRVAAGLGIGTGQFDRRFSSLSGGEKTKVGXXXXXX 181 L++ YG +QEKF GGYEIEA+I +VA GL + T F R F LSGGE+TKV Sbjct: 120 LMERYGIIQEKFAFLGGYEIEANIMKVANGLQV-TELFPRSFLELSGGEQTKVSLAYMLL 178 Query: 182 XXXXXXXXXXXTNHLDMEAIEWLEQFLQDYEGTVVAISHDRYFLDAVVKKVIEIEDGEAF 241 TNHLD+ A+EWLEQFL++Y GTV+ ISHDRYFLD VV K+ ++EDGE Sbjct: 179 QKPDLLLLDEPTNHLDLFAVEWLEQFLKEYNGTVMVISHDRYFLDEVVTKIFDLEDGEIH 238 Query: 242 TFHTNYSGYQIEKEARLLRQFADYXXXXXXXXXXXXXXXRLIEWGNRSNPPNPSFHRRAA 301 +HTNYS + EKE RLL++F Y RL EW N++NPPN H+RA Sbjct: 239 VYHTNYSQFVEEKEERLLQEFQAYQEQQKKIKKMKEAIKRLREWANQANPPNEGLHKRAR 298 Query: 302 SMQKALDRMVKVKRPVLERKAMDLQLQQEDRTGNQVVILDRIGKSYGDRTLFSGANEVLR 361 SM++AL+RM K+K+P+LERK M LQ + +DR+G VV++ + K + D LF+ N +R Sbjct: 299 SMERALERMQKLKKPILERKQMGLQFEGQDRSGKDVVVIKEVSKGFADHPLFNEVNLHVR 358 Query: 362 YGETTALIGGNGAGKSTLLRIILGQELPDEGSCILASRAVVGYLAQEAVPEDGKLSVLRY 421 + E A++G NG GK+TLL+++L Q PD G + S +GYL+Q A + K +VL Sbjct: 359 FQERVAIVGRNGTGKTTLLKLLLEQIEPDAGEIRIGSSVKIGYLSQHAYG-NRKSNVLEA 417 Query: 422 FXXXXXXXXXXXXXXXXRFLFYGSDVFKNIANLSGGEWTRLRFAVLMHRRPNLLILDEPT 481 F +FLFYG VFK + LSGGE RLR A LM++ N LILDEPT Sbjct: 418 FREYVAVTEGEARHILAKFLFYGPAVFKKVTQLSGGEKMRLRLAQLMYQDINFLILDEPT 477 Query: 482 NHLDIDSREALEEALEEYPGTVLAVSHDRYFINRCFGKLWSIAEGRFTVFSGN 534 NHLDI+SRE LEEALE+Y GT+LAVSHDRYF+N+ F K + I E + F+GN Sbjct: 478 NHLDIESREVLEEALEQYNGTILAVSHDRYFLNKLFEKTYWIDERKLFEFAGN 530 Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 70/260 (26%), Positives = 110/260 (42%), Gaps = 48/260 (18%) Query: 2 IISCQNVQKYHGAQLVLSDITFDIRQGEKIGLIGRNGCGKTTLFHLLSGEERPDQGQISI 61 ++ + V K + +++ +R E++ ++GRNG GKTTL LL + PD G+I I Sbjct: 334 VVVIKEVSKGFADHPLFNEVNLHVRFQERVAIVGRNGTGKTTLLKLLLEQIEPDAGEIRI 393 Query: 62 RKGSIVGLLAQIQEVNDGETVYAVLQRSFAEPLEWQARLRELELAMSQPDAGSSGLTFER 121 +G L+Q N V R + E +AR Sbjct: 394 GSSVKIGYLSQHAYGNRKSNVLEAF-REYVAVTEGEAR---------------------- 430 Query: 122 LLKEYGTLQEKFEAAGGYEIEASIQRVAAGLGIGTGQFDRRFSSLSGGEKTKVGXXXXXX 181 +A L G F ++ + LSGGEK ++ Sbjct: 431 ------------------------HILAKFLFYGPAVF-KKVTQLSGGEKMRLRLAQLMY 465 Query: 182 XXXXXXXXXXXTNHLDMEAIEWLEQFLQDYEGTVVAISHDRYFLDAVVKKVIEIEDGEAF 241 TNHLD+E+ E LE+ L+ Y GT++A+SHDRYFL+ + +K I++ + F Sbjct: 466 QDINFLILDEPTNHLDIESREVLEEALEQYNGTILAVSHDRYFLNKLFEKTYWIDERKLF 525 Query: 242 TFHTNYSGYQIEKEARLLRQ 261 F NY+ + + E RL Q Sbjct: 526 EFAGNYAWARQKWEERLETQ 545 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.318 0.136 0.392 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 3,472,264,747 Number of extensions: 137344935 Number of successful extensions: 867218 Number of sequences better than 1.0e-05: 9791 Number of HSP's gapped: 843140 Number of HSP's successfully gapped: 18801 Length of query: 640 Length of database: 3,060,696,203 Length adjustment: 142 Effective length of query: 498 Effective length of database: 1,722,912,073 Effective search space: 858010212354 Effective search space used: 858010212354 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 135 (56.6 bits)