BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0476.0043.p (168 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3K6N7.1 B3K6N7_9BACI NLP/P60 protein 214 2e-54 C0ZCP7.1 C0ZCP7_BREBN Putative gamma-DL-glutamyl hydrolase EC=3.... 145 1e-33 C0ZHY3.1 C0ZHY3_BREBN Putative uncharacterized protein 138 1e-31 C0ZDC2.1 C0ZDC2_BREBN Putative uncharacterized protein 134 2e-30 A4IMI2.1 A4IMI2_GEOTN Phosphatase-associated protein 121 2e-26 >B3K6N7.1 B3K6N7_9BACI NLP/P60 protein Length = 164 Score = 214 bits (545), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 105/168 (62%), Positives = 126/168 (75%), Gaps = 4/168 (2%) Query: 1 MKKQQWFKQAIVVGMCTTIGLSTLMXXXXXXXXXXXXXXXXXXXQQIVNLGKKYMGVRYE 60 M +Q W K+A+V+ + T+G+ ++ ++VN GK+YMG Y+ Sbjct: 1 MNRQNWIKKAVVISLSATLGVGAVLTVAPPAPVEAASVSTGT---RVVNFGKQYMGTPYK 57 Query: 61 FGAPTSSTRTFDCSSFTKYIFGKYGVNLPRTSSAQSKVGKSVSKANLKVGDLVFFSSGSR 120 FGA TS+TR FDCSSF K+IF KYGVNLPRTS+AQSKVGK+VSK+NL+ GDLVFFSSGSR Sbjct: 58 FGASTSTTRVFDCSSFMKHIFKKYGVNLPRTSAAQSKVGKAVSKSNLRAGDLVFFSSGSR 117 Query: 121 ANGSNVTHVAVYIGNGKILHTYGSPGVTISDLNSGNWKRTYLKARRVL 168 ANG NVTHVAVY+GN KILHTYG PGVTIS L SGNW +TYLKARRVL Sbjct: 118 ANGRNVTHVAVYMGNNKILHTYGKPGVTISSL-SGNWSKTYLKARRVL 164 >C0ZCP7.1 C0ZCP7_BREBN Putative gamma-DL-glutamyl hydrolase EC=3.4.19.- Length = 293 Score = 145 bits (366), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 64/124 (51%), Positives = 91/124 (73%) Query: 45 QQIVNLGKKYMGVRYEFGAPTSSTRTFDCSSFTKYIFGKYGVNLPRTSSAQSKVGKSVSK 104 Q++ G+KYMG Y++G+ +S+T+TFDCSSFT+ +F + G+ LPR S QS VGKSVSK Sbjct: 170 DQVIKNGEKYMGTNYKYGSSSSTTKTFDCSSFTQRVFKEAGITLPRDSRQQSTVGKSVSK 229 Query: 105 ANLKVGDLVFFSSGSRANGSNVTHVAVYIGNGKILHTYGSPGVTISDLNSGNWKRTYLKA 164 +NL+ GDL+F + + +THVA+Y G+GKILHTYGSPGVT S + NW++ +K Sbjct: 230 SNLQKGDLIFMKASVNSTSDRITHVAIYAGDGKILHTYGSPGVTYSKYDGTNWEKRTVKI 289 Query: 165 RRVL 168 +RV+ Sbjct: 290 KRVI 293 >C0ZHY3.1 C0ZHY3_BREBN Putative uncharacterized protein Length = 166 Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 66/125 (52%), Positives = 87/125 (69%), Gaps = 1/125 (0%) Query: 45 QQIVNLGKKYMGVRYEFGAPTSSTRTFDCSSFTKYIFG-KYGVNLPRTSSAQSKVGKSVS 103 +++ G+KYMG Y+FGA +++T FDCSSFTK +F G +LPRTS Q+KVG SVS Sbjct: 42 DKVIATGRKYMGTPYKFGASSNTTAVFDCSSFTKRVFKVAVGKSLPRTSRDQAKVGTSVS 101 Query: 104 KANLKVGDLVFFSSGSRANGSNVTHVAVYIGNGKILHTYGSPGVTISDLNSGNWKRTYLK 163 K+NLK GDLVFF + +THVA+Y GN K+LHTYG PGVT S +W++ ++ Sbjct: 102 KSNLKKGDLVFFKASKTTTSKRITHVAIYAGNNKLLHTYGKPGVTYSTFKGTSWEKRFVS 161 Query: 164 ARRVL 168 ARRVL Sbjct: 162 ARRVL 166 >C0ZDC2.1 C0ZDC2_BREBN Putative uncharacterized protein Length = 227 Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 65/124 (52%), Positives = 89/124 (71%), Gaps = 3/124 (2%) Query: 46 QIVNLGKKYMGVRYEFGAPTSSTRTFDCSSFTKYIFGKYGVNLPRTSSAQSKVGKSVSKA 105 Q+++ G KY GV Y+FG+ +TRTFDCSSFT+ +F + GV+LPR S QSKVG+ VSK Sbjct: 106 QVISEGMKYKGVPYKFGSSKKTTRTFDCSSFTQRVFKEVGVSLPRDSRQQSKVGQKVSKD 165 Query: 106 NLKVGDLVFFSS-GSRANGSNVTHVAVYIGNGKILHTYGSPGVTISDLNSGNWKRTYLKA 164 L+ GDLVFF S GS + S +THVA+Y G+ K+LHTYG PGVT ++ +W++ + Sbjct: 166 QLQKGDLVFFHSYGSSS--SRITHVAIYAGDNKLLHTYGKPGVTTTNFKGTSWEKRFEVG 223 Query: 165 RRVL 168 RRV+ Sbjct: 224 RRVI 227 >A4IMI2.1 A4IMI2_GEOTN Phosphatase-associated protein Length = 347 Score = 121 bits (304), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 62/123 (50%), Positives = 86/123 (69%), Gaps = 3/123 (2%) Query: 46 QIVNLGKKYMGVRYEFGAPTSSTRTFDCSSFTKYIFGKYGVNLPRTSSAQSKVGKSVSKA 105 +I+ +G+KY+G RY +GA S T FDCSSFT +F + G++LPRTSSAQ++ GK+VS Sbjct: 227 KIIKIGEKYLGARYLYGADPSRTDVFDCSSFTMRVFSEAGISLPRTSSAQAQAGKAVSFN 286 Query: 106 NLKVGDLVFFSSGSRANGSNVTHVAVYIGNGKILHTYGSPGVTISDLNSGNWKRTYLKAR 165 L+ GDLVFF + S NG+ + HV +Y GNG++++ S GVT S L S WK ++KA Sbjct: 287 QLQKGDLVFFDTDS--NGT-INHVGIYAGNGQMINATVSLGVTYSSLTSSYWKTRFVKAV 343 Query: 166 RVL 168 RVL Sbjct: 344 RVL 346 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.318 0.132 0.388 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 845,286,895 Number of extensions: 28294409 Number of successful extensions: 73065 Number of sequences better than 1.0e-05: 2493 Number of HSP's gapped: 70588 Number of HSP's successfully gapped: 2507 Length of query: 168 Length of database: 3,060,696,203 Length adjustment: 125 Effective length of query: 43 Effective length of database: 1,883,069,328 Effective search space: 80971981104 Effective search space used: 80971981104 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 126 (53.1 bits)