BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0476.0025.p
         (175 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B3K6R5.1 B3K6R5_9BACI Putative uncharacterized protein                140   5e-32

>B3K6R5.1 B3K6R5_9BACI Putative uncharacterized protein
          Length = 174

 Score =  140 bits (353), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 77/174 (44%), Positives = 103/174 (59%), Gaps = 5/174 (2%)

Query: 1   MARSWERMVQRNTQQVNKQRKKQGKEXXXXXXXXXXXXXXDVFKGRNIVFPVVLMLLGIM 60
           M+RSWER V +N  Q+NKQRKKQG                DVFKGR  V P+VL+ L  +
Sbjct: 1   MSRSWERKVSKNMSQLNKQRKKQG---LTSYQGSAINDKHDVFKGRKYVLPLVLVALAGL 57

Query: 61  FWVVGSIDE--AKGSGILANWLGVVXXXXXXXXXXXXXXXXKVERARLSTIKYNRERLLP 118
           + ++G+     A GS  + NW+GV                 K+ERA +ST+K+NRER L 
Sbjct: 58  YALLGTATSQAAGGSNDVLNWVGVSLYILLALMIFLRKPYLKIERASVSTMKFNRERRLA 117

Query: 119 AADIEKITVTRGTVSIKYKGKRTQWVFSRLINRYDIKAMTERLEQFAKQNHVEL 172
            +DIEKI +  G+V I+ KGK   WVFSR++N YD KAM ERLE+FAK + + +
Sbjct: 118 VSDIEKIKLASGSVVIQGKGKAGNWVFSRMMNLYDTKAMGERLEEFAKTHQIPV 171


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.321    0.135    0.390 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 778,087,754
Number of extensions: 22167379
Number of successful extensions: 53564
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 53562
Number of HSP's successfully gapped: 1
Length of query: 175
Length of database: 3,060,696,203
Length adjustment: 126
Effective length of query: 49
Effective length of database: 1,873,648,313
Effective search space: 91808767337
Effective search space used: 91808767337
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 126 (53.1 bits)