BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0472.0049.p (409 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3K6F3.1 B3K6F3_9BACI Peptidase M29 aminopeptidase II 571 e-161 A6CT36.1 A6CT36_9BACI Aminopeptidase 546 e-153 Q2B121.1 Q2B121_9BACI Aminopeptidase 530 e-148 C1EV96.1 C1EV96_BACC3 Aminopeptidase AmpS EC=3.4.11.- 526 e-147 C2NC96.1 C2NC96_BACCE Aminopeptidase 2 526 e-147 >B3K6F3.1 B3K6F3_9BACI Peptidase M29 aminopeptidase II Length = 409 Score = 571 bits (1471), Expect = e-161, Method: Compositional matrix adjust. Identities = 266/409 (65%), Positives = 324/409 (79%) Query: 1 MLSFTQKLENYALLTVKIGINIQPGQTLVVNADIASAELVRLVVRKAYEAGAKLVKVNYT 60 M SF QKLE YA L VK+G N+QPGQTLVVNA I +A LVRL+V+KAYE GAK VKVNY+ Sbjct: 1 MSSFEQKLERYAELAVKVGANVQPGQTLVVNAMIDAAPLVRLIVKKAYETGAKQVKVNYS 60 Query: 61 DELVTRTRYELAPSESFLEPPKWQADELEDLAKNGAAFLSVISTNPDLLNGIDPVRIADN 120 DE+V R RY+LAP E FLEPP + A+E+ +LA+ GAAFL+++S+NPDLL G+DP RI++ Sbjct: 61 DEIVNRIRYDLAPDEVFLEPPTYYAEEVTELAEQGAAFLTILSSNPDLLKGVDPERISNY 120 Query: 121 QRTAGQAMMPYRELLMGNHVSWSLVAYPSPVWAAKVFPDAPPEQQVELLWDAIFKAVRAD 180 QRT G AM YR+ + +SW+ +AY SP WA+KVFPD P QQV+ +WDAIF AVRAD Sbjct: 121 QRTYGAAMSKYRQYQQADKMSWTGIAYASPDWASKVFPDVPAGQQVDKMWDAIFHAVRAD 180 Query: 181 QENPVEAWSLHLAGLKQRCDILNAKKYRKLHYTAPGTDLMLELPEGHIWCQAGAVNGRGV 240 E+P+ AW H+ L+++ D LNAKKY KL +T+PGTDL +ELPEGHIW QAG+ N +G Sbjct: 181 LEDPIGAWEEHIHTLQRKSDELNAKKYHKLRFTSPGTDLTIELPEGHIWAQAGSHNEKGE 240 Query: 241 PFLANIPTEEVFTAPLKTGANGTVSSTKPLSYSGNIIDRFTLTLENGKVTDFTAEVGQDA 300 F+ANIPTEEVFTAPLKTG NGTV STKPLSY GNIID F++T ENG++ DF+AE GQD Sbjct: 241 RFVANIPTEEVFTAPLKTGVNGTVRSTKPLSYGGNIIDNFSITFENGRIVDFSAEQGQDT 300 Query: 301 LASLLAMDEGSAYFGEVALVPYHSPISESGILYFTTLYDENASCHLALGAAYAFTLEQGT 360 L L++MDEGS Y GEVALVP+ SPISESGILY+ TL+DENASCHLA+G+AYAF LE G Sbjct: 301 LTRLISMDEGSHYLGEVALVPHRSPISESGILYYNTLFDENASCHLAIGSAYAFNLEGGK 360 Query: 361 AMTKEQLAEHGMNQSLTHVDFMMGSADMNIDGITDEGLAEPIFRNGNWA 409 MT EQL G+N S+THVDFMMGS D+ I GIT +G EP+F +GNWA Sbjct: 361 TMTSEQLQASGLNTSITHVDFMMGSKDLQITGITHDGKEEPVFIDGNWA 409 >A6CT36.1 A6CT36_9BACI Aminopeptidase Length = 410 Score = 546 bits (1406), Expect = e-153, Method: Compositional matrix adjust. Identities = 250/409 (61%), Positives = 323/409 (78%) Query: 1 MLSFTQKLENYALLTVKIGINIQPGQTLVVNADIASAELVRLVVRKAYEAGAKLVKVNYT 60 M +F Q LE YA L VK+G+N+Q GQTLVVNA + +AE VRLVV+KAYE GAK V VN+ Sbjct: 1 MENFKQNLEKYADLAVKVGVNVQKGQTLVVNASLDAAEFVRLVVKKAYETGAKHVYVNWN 60 Query: 61 DELVTRTRYELAPSESFLEPPKWQADELEDLAKNGAAFLSVISTNPDLLNGIDPVRIADN 120 D+ V +Y+LAP E+F E P+W+A E+E LA+NGAAF+S++S +PDLL G++P RI++ Sbjct: 61 DDTVNLYKYDLAPDEAFTEFPEWKAKEMETLAENGAAFMSIVSASPDLLKGVNPERISNF 120 Query: 121 QRTAGQAMMPYRELLMGNHVSWSLVAYPSPVWAAKVFPDAPPEQQVELLWDAIFKAVRAD 180 Q+ AG+AM YR + + VSWS++A PS WAAKVFPD P E+QV+ LWDAIFKAVRAD Sbjct: 121 QKAAGKAMDKYRSYIQSDKVSWSVLAAPSEKWAAKVFPDEPAEEQVDKLWDAIFKAVRAD 180 Query: 181 QENPVEAWSLHLAGLKQRCDILNAKKYRKLHYTAPGTDLMLELPEGHIWCQAGAVNGRGV 240 Q++PV+AW H L ++ D LN+KKY+KLHYTAPGTDL +E PEG++W AG+V+ +GV Sbjct: 181 QQDPVQAWKDHDQNLHEKVDYLNSKKYKKLHYTAPGTDLTIEFPEGYMWVGAGSVSEKGV 240 Query: 241 PFLANIPTEEVFTAPLKTGANGTVSSTKPLSYSGNIIDRFTLTLENGKVTDFTAEVGQDA 300 F+AN+PTEEVFT PLKTG NGTVSSTKPLSY GN+ID F LT + G++ + AE G+D Sbjct: 241 NFMANMPTEEVFTVPLKTGVNGTVSSTKPLSYGGNVIDNFKLTFKEGRIVEVQAEEGEDI 300 Query: 301 LASLLAMDEGSAYFGEVALVPYHSPISESGILYFTTLYDENASCHLALGAAYAFTLEQGT 360 L L+ DEGS Y GEVALVP+ SPIS+S IL++ TL+DENAS HLA+G+AYAF +E G Sbjct: 301 LKRLVETDEGSHYLGEVALVPHQSPISQSNILFYNTLFDENASNHLAIGSAYAFCVEGGK 360 Query: 361 AMTKEQLAEHGMNQSLTHVDFMMGSADMNIDGITDEGLAEPIFRNGNWA 409 M+K++L + G+N S+THVDFM+GSA+MNIDGIT++G EP+FRNGNWA Sbjct: 361 NMSKDELEKAGLNNSITHVDFMIGSAEMNIDGITEDGKTEPVFRNGNWA 409 >Q2B121.1 Q2B121_9BACI Aminopeptidase Length = 410 Score = 530 bits (1364), Expect = e-148, Method: Compositional matrix adjust. Identities = 244/409 (59%), Positives = 317/409 (77%) Query: 1 MLSFTQKLENYALLTVKIGINIQPGQTLVVNADIASAELVRLVVRKAYEAGAKLVKVNYT 60 M F Q LE YA L VK+G+N+Q GQTLV+NA + +AE VRL V+KAYE GA V VN++ Sbjct: 1 MSQFLQNLEKYAELAVKVGVNVQEGQTLVINAALDAAEFVRLAVKKAYETGAANVVVNWS 60 Query: 61 DELVTRTRYELAPSESFLEPPKWQADELEDLAKNGAAFLSVISTNPDLLNGIDPVRIADN 120 D+ VTR +Y+LAP ESF E P+++A E+EDLA+ GAAF+S++S +PDLL G+ RIA+ Sbjct: 61 DDTVTRLKYDLAPEESFTEYPEFRAKEMEDLAEKGAAFMSIVSASPDLLKGVKSERIANF 120 Query: 121 QRTAGQAMMPYRELLMGNHVSWSLVAYPSPVWAAKVFPDAPPEQQVELLWDAIFKAVRAD 180 Q+ AG+A+ YR + VSW+++A PS WA KVF D P E +VE LWDAIFKA RAD Sbjct: 121 QKAAGKALSKYRRYAQSDKVSWTVIAVPSEGWADKVFADDPKESRVEKLWDAIFKATRAD 180 Query: 181 QENPVEAWSLHLAGLKQRCDILNAKKYRKLHYTAPGTDLMLELPEGHIWCQAGAVNGRGV 240 E+PV+AW H A L ++ D LN+K ++KLHYTAPGTDL +ELPE H+W AG+VN +G Sbjct: 181 LEDPVQAWKDHDASLHEKVDYLNSKGFKKLHYTAPGTDLTIELPEKHLWVGAGSVNEKGH 240 Query: 241 PFLANIPTEEVFTAPLKTGANGTVSSTKPLSYSGNIIDRFTLTLENGKVTDFTAEVGQDA 300 F+AN+PTEEVFT PLKTG NG VSSTKPLSY GNIID FT+T ENG++ D AE G++ Sbjct: 241 EFMANMPTEEVFTVPLKTGVNGHVSSTKPLSYGGNIIDNFTITFENGRIVDVKAEEGEEI 300 Query: 301 LASLLAMDEGSAYFGEVALVPYHSPISESGILYFTTLYDENASCHLALGAAYAFTLEQGT 360 L L+ DEGS Y GEVALVP++SPIS+S +L++ TL+DENAS HLA+G+AYAF +E G Sbjct: 301 LKQLVETDEGSHYLGEVALVPFNSPISQSNLLFYNTLFDENASNHLAIGSAYAFCIEGGK 360 Query: 361 AMTKEQLAEHGMNQSLTHVDFMMGSADMNIDGITDEGLAEPIFRNGNWA 409 M+ E+LAE+G+N+SLTHVDFM+GSA+M+IDGI ++G +EP+FR G+WA Sbjct: 361 KMSSEELAENGLNESLTHVDFMIGSAEMDIDGIKEDGQSEPVFRKGDWA 409 >C1EV96.1 C1EV96_BACC3 Aminopeptidase AmpS EC=3.4.11.- Length = 409 Score = 526 bits (1356), Expect = e-147, Method: Compositional matrix adjust. Identities = 242/408 (59%), Positives = 310/408 (75%) Query: 2 LSFTQKLENYALLTVKIGINIQPGQTLVVNADIASAELVRLVVRKAYEAGAKLVKVNYTD 61 +SF Q LE YA L V +G+NIQPGQTL ++A + + + VRLV KAY++GAK V V++ D Sbjct: 1 MSFEQTLEKYAALAVNVGVNIQPGQTLSISAPLEAVQFVRLVTEKAYKSGAKHVYVDWND 60 Query: 62 ELVTRTRYELAPSESFLEPPKWQADELEDLAKNGAAFLSVISTNPDLLNGIDPVRIADNQ 121 E +TR +++LAP E+F E P W+A+ E+LAK GAAF+S+ + NPDLL G+D RIA Sbjct: 61 ETLTRLKFDLAPEEAFAEFPSWKANAREELAKEGAAFMSIYAENPDLLKGVDSTRIATAH 120 Query: 122 RTAGQAMMPYRELLMGNHVSWSLVAYPSPVWAAKVFPDAPPEQQVELLWDAIFKAVRADQ 181 + AG+AM YR+ + + VSW +++ P+ WAAKVFPDA PE+Q LWDAIFKA RAD Sbjct: 121 KVAGEAMKVYRDYVQADKVSWCVISVPTKEWAAKVFPDAAPEEQEAKLWDAIFKATRADL 180 Query: 182 ENPVEAWSLHLAGLKQRCDILNAKKYRKLHYTAPGTDLMLELPEGHIWCQAGAVNGRGVP 241 ENPVEAW H L + D LN K Y+ LHYT PGTDL +ELPE H+W AG++N + VP Sbjct: 181 ENPVEAWKEHDKTLHTKVDYLNEKHYKALHYTGPGTDLTIELPEKHVWAGAGSLNEKNVP 240 Query: 242 FLANIPTEEVFTAPLKTGANGTVSSTKPLSYSGNIIDRFTLTLENGKVTDFTAEVGQDAL 301 F+ANIPTEEVFT PLKTG NG VSSTKPL+++GNIID FTLT ENG++ D+ AEVG++AL Sbjct: 241 FMANIPTEEVFTMPLKTGVNGQVSSTKPLAFAGNIIDNFTLTFENGRIVDYKAEVGEEAL 300 Query: 302 ASLLAMDEGSAYFGEVALVPYHSPISESGILYFTTLYDENASCHLALGAAYAFTLEQGTA 361 L+ DEGS + GEVALVP+ SPIS + IL++ TL+DENASCHLA+G+AYAF L G Sbjct: 301 KHLVETDEGSHFLGEVALVPHDSPISNTNILFYNTLFDENASCHLAIGSAYAFNLVGGKT 360 Query: 362 MTKEQLAEHGMNQSLTHVDFMMGSADMNIDGITDEGLAEPIFRNGNWA 409 M+KE+LAE+G N S+TH DFM+GSA+++IDGIT +G EPIFR GNWA Sbjct: 361 MSKEELAENGANTSITHNDFMIGSAELDIDGITADGRHEPIFRKGNWA 408 >C2NC96.1 C2NC96_BACCE Aminopeptidase 2 Length = 409 Score = 526 bits (1356), Expect = e-147, Method: Compositional matrix adjust. Identities = 242/408 (59%), Positives = 310/408 (75%) Query: 2 LSFTQKLENYALLTVKIGINIQPGQTLVVNADIASAELVRLVVRKAYEAGAKLVKVNYTD 61 +SF Q LE YA L V +G+NIQPGQTL ++A + + + VRLV KAY++GAK V V++ D Sbjct: 1 MSFEQTLEKYAALAVNVGVNIQPGQTLSISAPLEAVQFVRLVTEKAYKSGAKHVYVDWND 60 Query: 62 ELVTRTRYELAPSESFLEPPKWQADELEDLAKNGAAFLSVISTNPDLLNGIDPVRIADNQ 121 E +TR +++LAP E+F E P W+A+ E+LAK GAAF+S+ + NPDLL G+D RIA Sbjct: 61 ETLTRLKFDLAPEEAFAEFPSWKANAREELAKEGAAFMSIYAENPDLLKGVDSTRIATAH 120 Query: 122 RTAGQAMMPYRELLMGNHVSWSLVAYPSPVWAAKVFPDAPPEQQVELLWDAIFKAVRADQ 181 + AG+AM YR+ + + VSW +++ P+ WAAKVFPDA PE+Q LWDAIFKA RAD Sbjct: 121 KVAGEAMKVYRDYVQADKVSWCVISVPTKEWAAKVFPDAAPEEQEAKLWDAIFKATRADL 180 Query: 182 ENPVEAWSLHLAGLKQRCDILNAKKYRKLHYTAPGTDLMLELPEGHIWCQAGAVNGRGVP 241 ENPVEAW H L + D LN K Y+ LHYT PGTDL +ELPE H+W AG++N + VP Sbjct: 181 ENPVEAWKEHDKTLHTKVDYLNEKHYKALHYTGPGTDLTIELPEKHVWAGAGSLNEKNVP 240 Query: 242 FLANIPTEEVFTAPLKTGANGTVSSTKPLSYSGNIIDRFTLTLENGKVTDFTAEVGQDAL 301 F+ANIPTEEVFT PLKTG NG VSSTKPL+++GNIID FTLT ENG++ D+ AEVG++AL Sbjct: 241 FMANIPTEEVFTMPLKTGVNGQVSSTKPLAFAGNIIDNFTLTFENGRIVDYKAEVGEEAL 300 Query: 302 ASLLAMDEGSAYFGEVALVPYHSPISESGILYFTTLYDENASCHLALGAAYAFTLEQGTA 361 L+ DEGS + GEVALVP+ SPIS + IL++ TL+DENASCHLA+G+AYAF L G Sbjct: 301 KHLVETDEGSHFLGEVALVPHDSPISNTNILFYNTLFDENASCHLAIGSAYAFNLVGGKT 360 Query: 362 MTKEQLAEHGMNQSLTHVDFMMGSADMNIDGITDEGLAEPIFRNGNWA 409 M+KE+LAE+G N S+TH DFM+GSA+++IDGIT +G EPIFR GNWA Sbjct: 361 MSKEELAENGANTSITHNDFMIGSAELDIDGITADGRHEPIFRKGNWA 408 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.316 0.133 0.392 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,505,681,493 Number of extensions: 107027741 Number of successful extensions: 242194 Number of sequences better than 1.0e-05: 615 Number of HSP's gapped: 241567 Number of HSP's successfully gapped: 615 Length of query: 409 Length of database: 3,060,696,203 Length adjustment: 138 Effective length of query: 271 Effective length of database: 1,760,596,133 Effective search space: 477121552043 Effective search space used: 477121552043 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 132 (55.5 bits)