BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0472.0048.p (412 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3K6F2.1 B3K6F2_9BACI Peptidase M29 aminopeptidase II 624 e-177 B3K6F3.1 B3K6F3_9BACI Peptidase M29 aminopeptidase II 561 e-158 A6CT36.1 A6CT36_9BACI Aminopeptidase 545 e-153 Q2B121.1 Q2B121_9BACI Aminopeptidase 541 e-152 Q9KAP2.1 Q9KAP2_BACHD Aminopeptidase 521 e-146 >B3K6F2.1 B3K6F2_9BACI Peptidase M29 aminopeptidase II Length = 410 Score = 624 bits (1609), Expect = e-177, Method: Compositional matrix adjust. Identities = 291/412 (70%), Positives = 343/412 (83%), Gaps = 2/412 (0%) Query: 1 MPQLQAQLSKYADLAVRIGVNVQPGQTLIVSAPISAAEFVRLITAKAYAIGASQVKVNWX 60 M L KYA+LAV++GVN+Q GQTL+V AP+ +AEF RLI KAY GA VK+ W Sbjct: 1 MSDFNTYLDKYAELAVKVGVNIQEGQTLVVHAPVDSAEFTRLIAKKAYEAGARLVKILWT 60 Query: 61 XXXEFITRQLFEHAAPEVFTKPPTWFAGEITEFAENGAAFLHVIAEDPDALKGIDSERIA 120 E IT+ FE AA +VFT+ P W+AGE+TE ENGAA LHV+AE+PD L GIDSERI Sbjct: 61 D--ETITKLQFEKAADDVFTEAPKWYAGEMTELVENGAAVLHVLAENPDLLSGIDSERIG 118 Query: 121 NYQKTRGEALTKYRELQMSDKVSWSIVAIPSQAWADKVFPDVPADERVDKLWEAIFHTVR 180 N+ K RGEAL +YR Q SDK SW +VA+PS AWA KVFPDVP E+V KLW+AIFHTVR Sbjct: 119 NFYKARGEALKQYRAYQQSDKFSWCLVAVPSAAWAAKVFPDVPESEQVGKLWDAIFHTVR 178 Query: 181 LDREDPVAAWQEHLDTLEQKANVLNAKKYKSLHYIAPGTDLSIELPEGHLWAQGDSINAK 240 +D+E+PV AW +HL+ LE K++VLNAKKYK LHY+APGTDL+IELPEGH+WAQGDSIN + Sbjct: 179 VDQENPVEAWNQHLEVLEAKSSVLNAKKYKKLHYVAPGTDLTIELPEGHIWAQGDSINER 238 Query: 241 GHSFVANMPTEEVFTAPLKTGVNGTVKATKPLSYGGNIIDGFSITFEQGRIVSVAAEQGQ 300 GHSFVANMPTEEVFTAPLKTGVNGTV +TKPLSY GNII+ FS+TF +G++VS AEQG Sbjct: 239 GHSFVANMPTEEVFTAPLKTGVNGTVHSTKPLSYAGNIINNFSLTFAEGKVVSFTAEQGY 298 Query: 301 EALEYLIGLDEGAKYLGEVALVPHKSPISESNILYFNTLFDENASNHLAIGTAYAFCLEG 360 E LE L+ +DEGA+YLGEVALVPH+SPISESNILY+NTLFDENASNHLA+G+AYAFCLEG Sbjct: 299 ETLERLLNMDEGARYLGEVALVPHQSPISESNILYYNTLFDENASNHLALGSAYAFCLEG 358 Query: 361 GKEMNKDELIAHGLNTSVTHVDFMIGSAEMDIYGITVDGTREPVFLKGNWAF 412 GK+MN+++LI +GLNTSVTHVDFMIGS +MDIYG+T DG EPVFLKGNWAF Sbjct: 359 GKDMNQEQLIQNGLNTSVTHVDFMIGSGDMDIYGVTADGKEEPVFLKGNWAF 410 >B3K6F3.1 B3K6F3_9BACI Peptidase M29 aminopeptidase II Length = 409 Score = 561 bits (1445), Expect = e-158, Method: Compositional matrix adjust. Identities = 264/411 (64%), Positives = 326/411 (79%), Gaps = 2/411 (0%) Query: 1 MPQLQAQLSKYADLAVRIGVNVQPGQTLIVSAPISAAEFVRLITAKAYAIGASQVKVNWX 60 M + +L +YA+LAV++G NVQPGQTL+V+A I AA VRLI KAY GA QVKVN+ Sbjct: 1 MSSFEQKLERYAELAVKVGANVQPGQTLVVNAMIDAAPLVRLIVKKAYETGAKQVKVNYS 60 Query: 61 XXXEFITRQLFEHAAPEVFTKPPTWFAGEITEFAENGAAFLHVIAEDPDALKGIDSERIA 120 E + R ++ A EVF +PPT++A E+TE AE GAAFL +++ +PD LKG+D ERI+ Sbjct: 61 D--EIVNRIRYDLAPDEVFLEPPTYYAEEVTELAEQGAAFLTILSSNPDLLKGVDPERIS 118 Query: 121 NYQKTRGEALTKYRELQMSDKVSWSIVAIPSQAWADKVFPDVPADERVDKLWEAIFHTVR 180 NYQ+T G A++KYR+ Q +DK+SW+ +A S WA KVFPDVPA ++VDK+W+AIFH VR Sbjct: 119 NYQRTYGAAMSKYRQYQQADKMSWTGIAYASPDWASKVFPDVPAGQQVDKMWDAIFHAVR 178 Query: 181 LDREDPVAAWQEHLDTLEQKANVLNAKKYKSLHYIAPGTDLSIELPEGHLWAQGDSINAK 240 D EDP+ AW+EH+ TL++K++ LNAKKY L + +PGTDL+IELPEGH+WAQ S N K Sbjct: 179 ADLEDPIGAWEEHIHTLQRKSDELNAKKYHKLRFTSPGTDLTIELPEGHIWAQAGSHNEK 238 Query: 241 GHSFVANMPTEEVFTAPLKTGVNGTVKATKPLSYGGNIIDGFSITFEQGRIVSVAAEQGQ 300 G FVAN+PTEEVFTAPLKTGVNGTV++TKPLSYGGNIID FSITFE GRIV +AEQGQ Sbjct: 239 GERFVANIPTEEVFTAPLKTGVNGTVRSTKPLSYGGNIIDNFSITFENGRIVDFSAEQGQ 298 Query: 301 EALEYLIGLDEGAKYLGEVALVPHKSPISESNILYFNTLFDENASNHLAIGTAYAFCLEG 360 + L LI +DEG+ YLGEVALVPH+SPISES ILY+NTLFDENAS HLAIG+AYAF LEG Sbjct: 299 DTLTRLISMDEGSHYLGEVALVPHRSPISESGILYYNTLFDENASCHLAIGSAYAFNLEG 358 Query: 361 GKEMNKDELIAHGLNTSVTHVDFMIGSAEMDIYGITVDGTREPVFLKGNWA 411 GK M ++L A GLNTS+THVDFM+GS ++ I GIT DG EPVF+ GNWA Sbjct: 359 GKTMTSEQLQASGLNTSITHVDFMMGSKDLQITGITHDGKEEPVFIDGNWA 409 >A6CT36.1 A6CT36_9BACI Aminopeptidase Length = 410 Score = 545 bits (1403), Expect = e-153, Method: Compositional matrix adjust. Identities = 256/412 (62%), Positives = 319/412 (77%), Gaps = 2/412 (0%) Query: 1 MPQLQAQLSKYADLAVRIGVNVQPGQTLIVSAPISAAEFVRLITAKAYAIGASQVKVNWX 60 M + L KYADLAV++GVNVQ GQTL+V+A + AAEFVRL+ KAY GA V VNW Sbjct: 1 MENFKQNLEKYADLAVKVGVNVQKGQTLVVNASLDAAEFVRLVVKKAYETGAKHVYVNWN 60 Query: 61 XXXEFITRQLFEHAAPEVFTKPPTWFAGEITEFAENGAAFLHVIAEDPDALKGIDSERIA 120 + + ++ A E FT+ P W A E+ AENGAAF+ +++ PD LKG++ ERI+ Sbjct: 61 D--DTVNLYKYDLAPDEAFTEFPEWKAKEMETLAENGAAFMSIVSASPDLLKGVNPERIS 118 Query: 121 NYQKTRGEALTKYRELQMSDKVSWSIVAIPSQAWADKVFPDVPADERVDKLWEAIFHTVR 180 N+QK G+A+ KYR SDKVSWS++A PS+ WA KVFPD PA+E+VDKLW+AIF VR Sbjct: 119 NFQKAAGKAMDKYRSYIQSDKVSWSVLAAPSEKWAAKVFPDEPAEEQVDKLWDAIFKAVR 178 Query: 181 LDREDPVAAWQEHLDTLEQKANVLNAKKYKSLHYIAPGTDLSIELPEGHLWAQGDSINAK 240 D++DPV AW++H L +K + LN+KKYK LHY APGTDL+IE PEG++W S++ K Sbjct: 179 ADQQDPVQAWKDHDQNLHEKVDYLNSKKYKKLHYTAPGTDLTIEFPEGYMWVGAGSVSEK 238 Query: 241 GHSFVANMPTEEVFTAPLKTGVNGTVKATKPLSYGGNIIDGFSITFEQGRIVSVAAEQGQ 300 G +F+ANMPTEEVFT PLKTGVNGTV +TKPLSYGGN+ID F +TF++GRIV V AE+G+ Sbjct: 239 GVNFMANMPTEEVFTVPLKTGVNGTVSSTKPLSYGGNVIDNFKLTFKEGRIVEVQAEEGE 298 Query: 301 EALEYLIGLDEGAKYLGEVALVPHKSPISESNILYFNTLFDENASNHLAIGTAYAFCLEG 360 + L+ L+ DEG+ YLGEVALVPH+SPIS+SNIL++NTLFDENASNHLAIG+AYAFC+EG Sbjct: 299 DILKRLVETDEGSHYLGEVALVPHQSPISQSNILFYNTLFDENASNHLAIGSAYAFCVEG 358 Query: 361 GKEMNKDELIAHGLNTSVTHVDFMIGSAEMDIYGITVDGTREPVFLKGNWAF 412 GK M+KDEL GLN S+THVDFMIGSAEM+I GIT DG EPVF GNWAF Sbjct: 359 GKNMSKDELEKAGLNNSITHVDFMIGSAEMNIDGITEDGKTEPVFRNGNWAF 410 >Q2B121.1 Q2B121_9BACI Aminopeptidase Length = 410 Score = 541 bits (1394), Expect = e-152, Method: Compositional matrix adjust. Identities = 256/412 (62%), Positives = 317/412 (76%), Gaps = 2/412 (0%) Query: 1 MPQLQAQLSKYADLAVRIGVNVQPGQTLIVSAPISAAEFVRLITAKAYAIGASQVKVNWX 60 M Q L KYA+LAV++GVNVQ GQTL+++A + AAEFVRL KAY GA+ V VNW Sbjct: 1 MSQFLQNLEKYAELAVKVGVNVQEGQTLVINAALDAAEFVRLAVKKAYETGAANVVVNWS 60 Query: 61 XXXEFITRQLFEHAAPEVFTKPPTWFAGEITEFAENGAAFLHVIAEDPDALKGIDSERIA 120 + +TR ++ A E FT+ P + A E+ + AE GAAF+ +++ PD LKG+ SERIA Sbjct: 61 D--DTVTRLKYDLAPEESFTEYPEFRAKEMEDLAEKGAAFMSIVSASPDLLKGVKSERIA 118 Query: 121 NYQKTRGEALTKYRELQMSDKVSWSIVAIPSQAWADKVFPDVPADERVDKLWEAIFHTVR 180 N+QK G+AL+KYR SDKVSW+++A+PS+ WADKVF D P + RV+KLW+AIF R Sbjct: 119 NFQKAAGKALSKYRRYAQSDKVSWTVIAVPSEGWADKVFADDPKESRVEKLWDAIFKATR 178 Query: 181 LDREDPVAAWQEHLDTLEQKANVLNAKKYKSLHYIAPGTDLSIELPEGHLWAQGDSINAK 240 D EDPV AW++H +L +K + LN+K +K LHY APGTDL+IELPE HLW S+N K Sbjct: 179 ADLEDPVQAWKDHDASLHEKVDYLNSKGFKKLHYTAPGTDLTIELPEKHLWVGAGSVNEK 238 Query: 241 GHSFVANMPTEEVFTAPLKTGVNGTVKATKPLSYGGNIIDGFSITFEQGRIVSVAAEQGQ 300 GH F+ANMPTEEVFT PLKTGVNG V +TKPLSYGGNIID F+ITFE GRIV V AE+G+ Sbjct: 239 GHEFMANMPTEEVFTVPLKTGVNGHVSSTKPLSYGGNIIDNFTITFENGRIVDVKAEEGE 298 Query: 301 EALEYLIGLDEGAKYLGEVALVPHKSPISESNILYFNTLFDENASNHLAIGTAYAFCLEG 360 E L+ L+ DEG+ YLGEVALVP SPIS+SN+L++NTLFDENASNHLAIG+AYAFC+EG Sbjct: 299 EILKQLVETDEGSHYLGEVALVPFNSPISQSNLLFYNTLFDENASNHLAIGSAYAFCIEG 358 Query: 361 GKEMNKDELIAHGLNTSVTHVDFMIGSAEMDIYGITVDGTREPVFLKGNWAF 412 GK+M+ +EL +GLN S+THVDFMIGSAEMDI GI DG EPVF KG+WAF Sbjct: 359 GKKMSSEELAENGLNESLTHVDFMIGSAEMDIDGIKEDGQSEPVFRKGDWAF 410 >Q9KAP2.1 Q9KAP2_BACHD Aminopeptidase Length = 410 Score = 521 bits (1342), Expect = e-146, Method: Compositional matrix adjust. Identities = 251/412 (60%), Positives = 303/412 (73%), Gaps = 2/412 (0%) Query: 1 MPQLQAQLSKYADLAVRIGVNVQPGQTLIVSAPISAAEFVRLITAKAYAIGASQVKVNWX 60 M Q L KYA+LAV++GVN+QPGQTL++ PISA E VRL+ KAY GA V V W Sbjct: 1 MTTFQENLEKYAELAVKVGVNIQPGQTLVIRTPISALELVRLVAKKAYEAGAKNVHVEWS 60 Query: 61 XXXEFITRQLFEHAAPEVFTKPPTWFAGEITEFAENGAAFLHVIAEDPDALKGIDSERIA 120 E +TR F A E F + P W A E AENGAAFL + +DPD LK D ER+A Sbjct: 61 D--EELTRTKFHLAPDEAFHEYPAWIAKGFEELAENGAAFLSITGQDPDLLKDADPERVA 118 Query: 121 NYQKTRGEALTKYRELQMSDKVSWSIVAIPSQAWADKVFPDVPADERVDKLWEAIFHTVR 180 N K G+AL +R M+DKVSWSIVA PS+ WA K+ PD D V+KLWEAIF R Sbjct: 119 NLNKAGGKALKTFRSYIMADKVSWSIVAAPSEGWAKKISPDESKDRAVEKLWEAIFAATR 178 Query: 181 LDREDPVAAWQEHLDTLEQKANVLNAKKYKSLHYIAPGTDLSIELPEGHLWAQGDSINAK 240 D+ DPVAAW+ HL TL +K N LN ++Y +LHY APGTDL+IELP+ HLW G S N Sbjct: 179 TDQADPVAAWKNHLKTLNEKMNELNKRRYHALHYKAPGTDLTIELPDTHLWVSGGSTNKD 238 Query: 241 GHSFVANMPTEEVFTAPLKTGVNGTVKATKPLSYGGNIIDGFSITFEQGRIVSVAAEQGQ 300 G FVAN+PTEEVFTA KTGVNGTV TKPL+YGG +ID F++TF+ G++V AEQG Sbjct: 239 GVDFVANIPTEEVFTAAKKTGVNGTVTNTKPLNYGGTLIDQFTLTFKDGKVVDFTAEQGY 298 Query: 301 EALEYLIGLDEGAKYLGEVALVPHKSPISESNILYFNTLFDENASNHLAIGTAYAFCLEG 360 E L+ L+ DEGA+Y+GEVALVPH+SPISE++++++NTLFDENASNHLAIGTAYAF +EG Sbjct: 299 ETLKRLLDTDEGARYIGEVALVPHQSPISETDLIFYNTLFDENASNHLAIGTAYAFNIEG 358 Query: 361 GKEMNKDELIAHGLNTSVTHVDFMIGSAEMDIYGITVDGTREPVFLKGNWAF 412 GKEM+++EL G+NTS+THVDFMIGS+EMDI GIT DG REPVF KGNWAF Sbjct: 359 GKEMSEEELEQAGINTSITHVDFMIGSSEMDIDGITKDGKREPVFRKGNWAF 410 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.317 0.133 0.393 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,492,370,791 Number of extensions: 104603722 Number of successful extensions: 255555 Number of sequences better than 1.0e-05: 619 Number of HSP's gapped: 254648 Number of HSP's successfully gapped: 619 Length of query: 412 Length of database: 3,060,696,203 Length adjustment: 138 Effective length of query: 274 Effective length of database: 1,760,596,133 Effective search space: 482403340442 Effective search space used: 482403340442 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 132 (55.5 bits)