BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0472.0042.p (457 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B1DC32.1 B1DC32_9BACL Putative uncharacterized protein 483 e-134 C0ZIR9.1 C0ZIR9_BREBN Conserved hypothetical membrane protein 436 e-120 B3K7V2.1 B3K7V2_9BACI Putative uncharacterized protein 432 e-119 C5D5Y2.1 C5D5Y2_9BACI Putative uncharacterized protein 412 e-113 A9VF50.1 A9VF50_BACWK Putative uncharacterized protein 404 e-111 >B1DC32.1 B1DC32_9BACL Putative uncharacterized protein Length = 435 Score = 483 bits (1242), Expect = e-134, Method: Compositional matrix adjust. Identities = 241/419 (57%), Positives = 314/419 (74%), Gaps = 2/419 (0%) Query: 34 FFVATEFALVRLRGSQISQMVLEGKKNALAVQRVAANLDGYLSACQLGITITALGIGALA 93 FFVATEFA++RLR S++ Q+VLEGKKNALAVQRV +NLD YLSACQLGITITALG+G L Sbjct: 11 FFVATEFAIIRLRSSRVDQLVLEGKKNALAVQRVTSNLDAYLSACQLGITITALGLGWLG 70 Query: 94 EPAFEQLLIPLFDLGNISHSVSEPXXXXXXXXXXXXXHVVVGELAPKTAAINIPEKIGQI 153 EP E+++ PLF+ + ++ HVV+GELAPKT AI E I Sbjct: 71 EPTVERIIHPLFEKLGVHSDLNHIISFVIAFVAVTFLHVVMGELAPKTWAIQKAEFISFA 130 Query: 154 TSPLIIWFYKILYPLIWLMNGSANLLVRMFGMKPASEHGDAHSEDEIRLILSESYESGKI 213 + II+F+KI+YP IW++NGSA L+RMFG+K EH +AHSE+EI++IL++S++SGKI Sbjct: 131 VAKPIIYFHKIMYPFIWVLNGSATGLIRMFGLKAVKEHEEAHSEEEIQIILNDSFQSGKI 190 Query: 214 NKAEYGYVNRIFTFDEMLAKEIMVPRTDMVCLFTNHSLKENLEIIRKEQYTRFPVADGSK 273 N EYGYV+RIF FDEMLAKEIMVPRTDM+CL+TN+S+ EN++IIRKEQYTRFPVA GSK Sbjct: 191 NNTEYGYVSRIFAFDEMLAKEIMVPRTDMICLYTNNSMMENMDIIRKEQYTRFPVATGSK 250 Query: 274 DNIIGMINTKQLYLQYDNNPDFDFKSLILPLLTVSEVTPXXXXTLLTRMQKERVHIALLL 333 DNI+GMINTKQL+L++ N +F+F+ L+ P+L VSEV P TLL RMQ+ERVHIA+L+ Sbjct: 251 DNIVGMINTKQLFLEFQENKEFNFQKLVHPVLAVSEVLP--VKTLLKRMQQERVHIAVLM 308 Query: 334 DEYGGTSGLITIEDILEEIVGEIXXXXXXXXXXNIEKLSDSHYLFDGNVSVLEVKELTGF 393 DEYGGTSG+ITIEDILEEIVGEI IEKL+D+ YL DG VS+ V E+TG Sbjct: 309 DEYGGTSGMITIEDILEEIVGEIRDEFDTDERKEIEKLADNCYLLDGKVSLDHVSEITGV 368 Query: 394 DLHDDEVTTIGGWLYSHLEEPAIGKSITHENVTLTVREMNRHRIRRVEFELAQPGSEDS 452 + ++V T+GGWL++ +P GK + +EN+ +RE+ +HRI++VE + + E + Sbjct: 369 AIDQEDVDTVGGWLFTEFTDPKPGKEMHYENLRFIIREVGKHRIKKVELIIEEEADEST 427 >C0ZIR9.1 C0ZIR9_BREBN Conserved hypothetical membrane protein Length = 439 Score = 436 bits (1121), Expect = e-120, Method: Compositional matrix adjust. Identities = 222/415 (53%), Positives = 300/415 (72%), Gaps = 8/415 (1%) Query: 34 FFVATEFALVRLRGSQISQMVLEGKKNALAVQRVAANLDGYLSACQLGITITALGIGALA 93 FFVATEFA+V+LR S++ Q+V+EG+KNALAVQ+V +NLDGYLSACQLGIT+TA+G+G L Sbjct: 18 FFVATEFAIVKLRPSRVDQLVMEGRKNALAVQKVVSNLDGYLSACQLGITLTAIGLGVLG 77 Query: 94 EPAFEQLLIPLFDLGNISHSVSEPXXXXXXXXXXXXXHVVVGELAPKTAAINIPEKIGQI 153 +P E ++ P F + V HVVVGELAPKT AI E + + Sbjct: 78 KPTIESIISP-FLTPYLPEQVVAVLSFVIAYSLVTFLHVVVGELAPKTVAIQKAEAVSLL 136 Query: 154 TSPLIIWFYKILYPLIWLMNGSANLLVRMFGMKPASEHGDAHSEDEIRLILSESYESGKI 213 + IIWFYK++YP IW++NGSA LLVR FGMKP H ++HSE+E+R+IL+ESYESGKI Sbjct: 137 CAKPIIWFYKLMYPAIWVLNGSAALLVRSFGMKPTKGHEESHSEEELRIILTESYESGKI 196 Query: 214 NKAEYGYVNRIFTFDEMLAKEIMVPRTDMVCLFTNHSLKENLEIIRKEQYTRFPVADGSK 273 N++EYGYV+ IF FDEMLA+EIMVPRTDM CL ++L++NL I+++EQYTRFPV +K Sbjct: 197 NQSEYGYVSNIFAFDEMLAREIMVPRTDMSCLHKEYTLEQNLRIMKEEQYTRFPVISQNK 256 Query: 274 DNIIGMINTKQLYLQYDNNPDFDFKSLILPLLTVSEVTPXXXXTLLTRMQKERVHIALLL 333 D+IIGMINTK+ +L Y ++P+ DF LI P L VSE TP LL +MQK+R HIA+L+ Sbjct: 257 DHIIGMINTKEFFLNYADDPNLDFSKLIRPFLMVSEATP--VKDLLKKMQKQRTHIAILI 314 Query: 334 DEYGGTSGLITIEDILEEIVGEIXXXXXXXXXXNIEKL-SDSHYLFDGNVSVLEVKELTG 392 DEYGGTSG++TIEDILEEIVGEI IE + +SH + DG V + EV +L Sbjct: 315 DEYGGTSGMVTIEDILEEIVGEIRDEFDAEEKAEIEIVEKNSHVIVDGKVLLSEVNDLLN 374 Query: 393 FDLHDDEVTTIGGWLYSHLEEPAIGKSI--THENVTLTVREMNRHRIRRVEFELA 445 +++++E+ TIGGWLYS + P + + I ++++ T+R+ ++HRIR++E + A Sbjct: 375 ANINEEELDTIGGWLYS--QNPTLKEGIQWQYDDLVFTIRKKDKHRIRKIEIQKA 427 >B3K7V2.1 B3K7V2_9BACI Putative uncharacterized protein Length = 450 Score = 432 bits (1111), Expect = e-119, Method: Compositional matrix adjust. Identities = 223/414 (53%), Positives = 294/414 (71%), Gaps = 2/414 (0%) Query: 34 FFVATEFALVRLRGSQISQMVLEGKKNALAVQRVAANLDGYLSACQLGITITALGIGALA 93 FFV TEFA++RLR S++ Q+V+EG+K ALAV++V +NLDGYLSACQLGITITALG+G L Sbjct: 21 FFVMTEFAIIRLRPSRVDQLVMEGRKGALAVKKVTSNLDGYLSACQLGITITALGLGWLG 80 Query: 94 EPAFEQLLIPLFDLGNISHSVSEPXXXXXXXXXXXXXHVVVGELAPKTAAINIPEKIGQI 153 EP E++L P+FD +I +++ HVV+GELAPKT AIN E + + Sbjct: 81 EPTIEKILHPVFDSLSIPAAIASLISFLLAFIIMTYIHVVIGELAPKTIAINKAEAVSFL 140 Query: 154 TSPLIIWFYKILYPLIWLMNGSANLLVRMFGMKPASEHGDAHSEDEIRLILSESYESGKI 213 + IIWF +I+YP IWL+NGSAN +VR+FGM PASEH +AHSE+E+R+ILS+SYESGKI Sbjct: 141 CATPIIWFNRIMYPFIWLLNGSANKIVRLFGMHPASEHEEAHSEEELRMILSDSYESGKI 200 Query: 214 NKAEYGYVNRIFTFDEMLAKEIMVPRTDMVCLFTNHSLKENLEIIRKEQYTRFPVADGSK 273 N+AEYGYV+RIF FD+MLAKEIMVPRTDM+CL+ + L NL+II++EQYTRFPV G K Sbjct: 201 NQAEYGYVSRIFAFDDMLAKEIMVPRTDMICLYVDKPLAANLQIIKREQYTRFPVVRGDK 260 Query: 274 DNIIGMINTKQLYLQYDNNPDFDFKSLILPLLTVSEVTPXXXXTLLTRMQKERVHIALLL 333 D I+GM+NTKQ +L++D+N + D LI P +TVSE P LL +MQ+E H+A+L+ Sbjct: 261 DQIVGMVNTKQFFLEFDDNSNIDLTKLIHPAMTVSEAIP--IKKLLRKMQQEGTHMAILI 318 Query: 334 DEYGGTSGLITIEDILEEIVGEIXXXXXXXXXXNIEKLSDSHYLFDGNVSVLEVKELTGF 393 DEYGGTSG+ITIEDILEEIVGEI + + + + DG VS+ + +L Sbjct: 319 DEYGGTSGMITIEDILEEIVGEIRDEFDEDEERELTQPEPNRIIADGKVSINRINDLLHT 378 Query: 394 DLHDDEVTTIGGWLYSHLEEPAIGKSITHENVTLTVREMNRHRIRRVEFELAQP 447 DL D++ TIGGWLY H E A G + + ++T TV E HR +++ P Sbjct: 379 DLSTDDLDTIGGWLYGHNSELAKGDTWRYNDLTFTVIEKKTHRYTKLQIVKETP 432 >C5D5Y2.1 C5D5Y2_9BACI Putative uncharacterized protein Length = 448 Score = 412 bits (1059), Expect = e-113, Method: Compositional matrix adjust. Identities = 207/410 (50%), Positives = 287/410 (70%), Gaps = 4/410 (0%) Query: 34 FFVATEFALVRLRGSQISQMVLEGKKNALAVQRVAANLDGYLSACQLGITITALGIGALA 93 FFVA+EFA+V++R S+I Q+V EG K A+A ++V +NLDGYLSA QLGITIT+LG+G L Sbjct: 18 FFVASEFAIVKVRSSRIDQLVSEGNKRAIAAKKVISNLDGYLSANQLGITITSLGLGWLG 77 Query: 94 EPAFEQLLIPLFDLGNISHSVSEPXXXXXXXXXXXXXHVVVGELAPKTAAINIPEKIGQI 153 EP E++L PLF+ ++ SVS HVVVGELAPKT AI+ E I + Sbjct: 78 EPTVERMLTPLFERIHLLESVSHVLSFVIAFSTITFLHVVVGELAPKTFAIHKAEAITLL 137 Query: 154 TSPLIIWFYKILYPLIWLMNGSANLLVRMFGMKPASEHGDAHSEDEIRLILSESYESGKI 213 T+ +I FYK++YP IW +N SA L+ RMFG+KPA+EH AHSE+E+RLILSESY+SG+I Sbjct: 138 TAQPLILFYKVMYPFIWALNNSARLVARMFGLKPAAEHEIAHSEEELRLILSESYKSGEI 197 Query: 214 NKAEYGYVNRIFTFDEMLAKEIMVPRTDMVCLFTNHSLKENLEIIRKEQYTRFPVADGSK 273 N++EY YVN IF FD+ +AKEIMVPR ++V L N S+KENLEII++E+YTR+PV DG K Sbjct: 198 NQSEYRYVNNIFRFDDRVAKEIMVPRKEIVALDINRSVKENLEIIKEEKYTRYPVIDGDK 257 Query: 274 DNIIGMINTKQLYLQYDNNP--DFDFKSLILPLLTVSEVTPXXXXTLLTRMQKERVHIAL 331 D+++G+IN K+++ NP + K I P++ V E LL +MQKER+H+A+ Sbjct: 258 DHVLGLINVKEVFTDLVTNPSEEKQMKDYIRPIIQVIE--SIAIHDLLVKMQKERIHMAI 315 Query: 332 LLDEYGGTSGLITIEDILEEIVGEIXXXXXXXXXXNIEKLSDSHYLFDGNVSVLEVKELT 391 L+DEYGGTSGL+T+EDILEEIVGEI I+K+ ++ + DG V + EV +L Sbjct: 316 LVDEYGGTSGLVTVEDILEEIVGEIQDEFDVDEIPLIQKVDETRTIIDGKVLISEVNDLF 375 Query: 392 GFDLHDDEVTTIGGWLYSHLEEPAIGKSITHENVTLTVREMNRHRIRRVE 441 G + D++V TIGGW+ + + +G S+ +N TV+EM+ H ++ +E Sbjct: 376 GLSIDDEDVDTIGGWILTKHYDIKVGDSVEIDNYLFTVKEMDGHHVKTIE 425 >A9VF50.1 A9VF50_BACWK Putative uncharacterized protein Length = 437 Score = 404 bits (1039), Expect = e-111, Method: Compositional matrix adjust. Identities = 205/413 (49%), Positives = 283/413 (68%), Gaps = 5/413 (1%) Query: 34 FFVATEFALVRLRGSQISQMVLEGKKNALAVQRVAANLDGYLSACQLGITITALGIGALA 93 FFVA EFA+V++RGS+I Q VLEGKK ALA ++V +NLD YLSACQLGIT+TA+G+GAL Sbjct: 18 FFVAIEFAIVKVRGSKIDQFVLEGKKGALAAKKVTSNLDEYLSACQLGITVTAMGLGALG 77 Query: 94 EPAFEQLLIPLFDLGNISHSVSEPXXXXXXXXXXXXXHVVVGELAPKTAAINIPEKIGQI 153 EP E+LL PLFD NI+ S++ HVVVGELAPKT AI EK+ + Sbjct: 78 EPTIERLLHPLFDKWNINPSIAGVLSLGIAFTIMTYLHVVVGELAPKTFAIQKAEKVTLL 137 Query: 154 TSPLIIWFYKILYPLIWLMNGSANLLVRMFGMKPASEHGDAHSEDEIRLILSESYESGKI 213 S +IWFYKI+YP I L+NGSA ++ MFG+KPASEH AH+E+E+RLILSESYE G+I Sbjct: 138 LSAPLIWFYKIMYPFIRLLNGSARMITGMFGLKPASEHDVAHTEEELRLILSESYERGEI 197 Query: 214 NKAEYGYVNRIFTFDEMLAKEIMVPRTDMVCLFTNHSLKENLEIIRKEQYTRFPVADGSK 273 N+AEY YVN IF FD +AKEIMVPRT+++ L ++SL ++++IIR E+YTR+PV K Sbjct: 198 NQAEYKYVNNIFEFDNRIAKEIMVPRTEIIGLHVDNSLADHMKIIRDEKYTRYPVFGEDK 257 Query: 274 DNIIGMINTKQLYLQYDNNPDFDFKSL---ILPLLTVSEVTPXXXXTLLTRMQKERVHIA 330 D IIGM+N K +++Y N +F S+ P++ V E P LL +MQK+R+ +A Sbjct: 258 DEIIGMVNVKDFFIRYMNKETKEFNSIQSYTRPVIEVIETIP--IHNLLLQMQKKRIPLA 315 Query: 331 LLLDEYGGTSGLITIEDILEEIVGEIXXXXXXXXXXNIEKLSDSHYLFDGNVSVLEVKEL 390 +L DEYGGT+G++TIEDILEEIVGEI I+++++ H + +G V + E+ +L Sbjct: 316 VLYDEYGGTAGIVTIEDILEEIVGEIRDEYDEDERPPIQQMNEGHLVVEGKVLISELNDL 375 Query: 391 TGFDLHDDEVTTIGGWLYSHLEEPAIGKSITHENVTLTVREMNRHRIRRVEFE 443 G ++D +V TIGGW+ + G+++ E + + H+I+RVE + Sbjct: 376 LGLHMNDSDVDTIGGWILMQNYDIQEGQTVNSEGYAFKILSKDPHQIKRVEIQ 428 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.319 0.138 0.393 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,444,765,776 Number of extensions: 92314256 Number of successful extensions: 216426 Number of sequences better than 1.0e-05: 4117 Number of HSP's gapped: 208467 Number of HSP's successfully gapped: 4120 Length of query: 457 Length of database: 3,060,696,203 Length adjustment: 139 Effective length of query: 318 Effective length of database: 1,751,175,118 Effective search space: 556873687524 Effective search space used: 556873687524 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 133 (55.8 bits)