BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0472.0041.p (199 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B1DC33.1 B1DC33_9BACL Putative uncharacterized protein 179 1e-43 A6CL02.1 A6CL02_9BACI Putative uncharacterized protein 167 4e-40 A7GQ08.1 A7GQ08_BACCN Putative uncharacterized protein 162 1e-38 Q81CC9.1 Q81CC9_BACCR Putative uncharacterized protein 162 1e-38 C2ZQX0.1 C2ZQX0_BACCE Putative uncharacterized protein 162 1e-38 >B1DC33.1 B1DC33_9BACL Putative uncharacterized protein Length = 255 Score = 179 bits (455), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 87/141 (61%), Positives = 109/141 (77%) Query: 20 MEAFTLSRIEMSELLLSLNSTIERKPLHILQDAWSKFHYEEVEKGASLPAFLSTEIPPIL 79 MEAFTL+R EM++LLL++ PL +LQ AW + H + E G+SLPAFLST +PP+L Sbjct: 1 MEAFTLTRKEMADLLLAMQGQNCCGPLQVLQQAWKQSHRDAYESGSSLPAFLSTALPPVL 60 Query: 80 QKLIKGSPVKGLSLGEIATLGHLIEYSTLSATSMQNWVKRDFKEYLGSPREGKKYSVNQA 139 KLIKG VKG SL EI+ LG LI++S +S TSMQNWVKRDFK Y P+ GKKYS+NQ Sbjct: 61 VKLIKGREVKGFSLQEISALGGLIDFSQMSITSMQNWVKRDFKAYFDCPKIGKKYSLNQT 120 Query: 140 ALLFMIDDLKAALDFGSIRQL 160 ALLF+I+DLK++LDFGSIR+L Sbjct: 121 ALLFIIEDLKSSLDFGSIRKL 141 >A6CL02.1 A6CL02_9BACI Putative uncharacterized protein Length = 299 Score = 167 bits (423), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 84/168 (50%), Positives = 118/168 (70%), Gaps = 1/168 (0%) Query: 10 RKSNGEGVPYMEAFTLSRIEMSELLLSLNSTIERKPLHILQDAWSKFHYEEVEKGASLPA 69 RK GV +EAF LSR M++LL SLN + E PL +LQ+AWS H EE++ G +L A Sbjct: 37 RKFGRAGVKNVEAFKLSRKNMADLLSSLNRSTEITPLMVLQEAWSSAHEEEMKNGKALKA 96 Query: 70 FLSTEIPPILQKLIKGSPVK-GLSLGEIATLGHLIEYSTLSATSMQNWVKRDFKEYLGSP 128 F+STE+P I QK K V+ G S+ EI +LG+ IE++ LS +++QNWVKRD KE +GSP Sbjct: 97 FISTEMPSIFQKFFKTESVEFGFSINEIVSLGNQIEFTNLSPSAVQNWVKRDIKELIGSP 156 Query: 129 REGKKYSVNQAALLFMIDDLKAALDFGSIRQLXXXXGCSSWHRSGTMM 176 + G+KY+++QAA+LF+++DLKAALDF SIR+L + R+ M+ Sbjct: 157 QLGRKYTIDQAAILFIVEDLKAALDFESIRKLLTLIFNNPEDRTDDMV 204 >A7GQ08.1 A7GQ08_BACCN Putative uncharacterized protein Length = 254 Score = 162 bits (411), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 84/163 (51%), Positives = 111/163 (68%), Gaps = 4/163 (2%) Query: 20 MEAFTLSRIEMSELLLSLNSTIERKPLHILQDAWSKFHYEEVEKGASLPAFLSTEIPPIL 79 ME F L+R EM+ LLLSL +KPL ILQ+AW+K H +++E G S+ AF++T + PI Sbjct: 1 METFHLTRNEMAALLLSLRGWNTKKPLSILQEAWAKSHKKDIESGQSVTAFITTALSPIF 60 Query: 80 QKLIKGSPVK-GLSLGEIATLGHLIEYSTLSATSMQNWVKRDFKEYLGSPREGKKYSVNQ 138 +KLIK G SL EI LG+ IE ++ S T+MQNWVKRD KE +GSP++GKKYS+ Q Sbjct: 61 EKLIKIEDTDVGFSLNEIVALGNQIENTSFSVTAMQNWVKRDIKEMIGSPQKGKKYSIEQ 120 Query: 139 AALLFMIDDLKAALDFGSIRQLXXXXGCSSWHRSGTMMIWSNP 181 AALLF+++DLK ALDF SIR+L RS ++ NP Sbjct: 121 AALLFIVEDLKTALDFESIRKLLRLIVNDPADRSDDLI---NP 160 >Q81CC9.1 Q81CC9_BACCR Putative uncharacterized protein Length = 254 Score = 162 bits (410), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 84/163 (51%), Positives = 111/163 (68%), Gaps = 4/163 (2%) Query: 20 MEAFTLSRIEMSELLLSLNSTIERKPLHILQDAWSKFHYEEVEKGASLPAFLSTEIPPIL 79 ME F L+R EM+ LLLSL +KPL ILQ+AW+K H +++E G S+ AF++T + PI Sbjct: 1 METFHLTRNEMATLLLSLRGWNTKKPLGILQEAWAKSHKKDIESGQSVTAFITTALSPIF 60 Query: 80 QKLIKGSPVK-GLSLGEIATLGHLIEYSTLSATSMQNWVKRDFKEYLGSPREGKKYSVNQ 138 +KLIK G SL EI LG+ IE ++ S T+MQNWVKRD KE +GSP++GKKYS+ Q Sbjct: 61 EKLIKIDDTDVGFSLNEIVALGNQIENTSFSVTAMQNWVKRDIKEMIGSPQKGKKYSIEQ 120 Query: 139 AALLFMIDDLKAALDFGSIRQLXXXXGCSSWHRSGTMMIWSNP 181 AALLF+++DLK ALDF SIR+L RS ++ NP Sbjct: 121 AALLFIVEDLKTALDFESIRKLLRLIVNDPADRSDDLI---NP 160 >C2ZQX0.1 C2ZQX0_BACCE Putative uncharacterized protein Length = 254 Score = 162 bits (410), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 84/163 (51%), Positives = 111/163 (68%), Gaps = 4/163 (2%) Query: 20 MEAFTLSRIEMSELLLSLNSTIERKPLHILQDAWSKFHYEEVEKGASLPAFLSTEIPPIL 79 ME F L+R EM+ LLLSL +KPL ILQ+AW+K H +++E G S+ AF++T + PI Sbjct: 1 METFHLTRNEMATLLLSLRGWNPKKPLSILQEAWAKSHKKDIESGQSVTAFITTALSPIF 60 Query: 80 QKLIKGSPVK-GLSLGEIATLGHLIEYSTLSATSMQNWVKRDFKEYLGSPREGKKYSVNQ 138 +KLIK G SL EI LG+ IE ++ S T+MQNWVKRD KE +GSP++GKKYS+ Q Sbjct: 61 EKLIKIDDTDVGFSLNEIVALGNQIENTSFSVTAMQNWVKRDIKEMIGSPQKGKKYSIEQ 120 Query: 139 AALLFMIDDLKAALDFGSIRQLXXXXGCSSWHRSGTMMIWSNP 181 AALLF+++DLK ALDF SIR+L RS ++ NP Sbjct: 121 AALLFIVEDLKTALDFESIRKLLRLIVNDPADRSDDLI---NP 160 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.318 0.132 0.389 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,137,399,214 Number of extensions: 40771225 Number of successful extensions: 88122 Number of sequences better than 1.0e-05: 84 Number of HSP's gapped: 88046 Number of HSP's successfully gapped: 84 Length of query: 199 Length of database: 3,060,696,203 Length adjustment: 129 Effective length of query: 70 Effective length of database: 1,845,385,268 Effective search space: 129176968760 Effective search space used: 129176968760 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 127 (53.5 bits)