BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0472.0024.p (177 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C3BKU1.1 C3BKU1_9BACI Putative uncharacterized protein 238 1e-61 C3B424.1 C3B424_BACMY Putative uncharacterized protein 238 2e-61 C3ALY5.1 C3ALY5_BACMY Putative uncharacterized protein 238 2e-61 Q8TK81.1 Q8TK81_METAC Putative uncharacterized protein 215 2e-54 Q46A39.1 Q46A39_METBF Putative uncharacterized protein 210 4e-53 >C3BKU1.1 C3BKU1_9BACI Putative uncharacterized protein Length = 174 Score = 238 bits (607), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 108/173 (62%), Positives = 139/173 (80%) Query: 4 IAEKTKIVEVVPYDPAWKKEFIRLRDFLLEITGDLIIAAEHVGSTSVEGLSAKPIIDIDL 63 +AEKT+I+E++ Y+P WK EF +++ + GDLI+ EHVGSTSVEGL+AKPIIDID+ Sbjct: 1 MAEKTRIIEIMSYNPEWKMEFKKIKIMIESYIGDLILRIEHVGSTSVEGLAAKPIIDIDV 60 Query: 64 VMESYEVFPEIVQRLSQYGYVHQGDLGIEGREAFRREQEDGFMKYHLYVCPKDGKGYLEH 123 V+ESY++ P+I++RL + GY HQGDLG+EGREAF+R ED FMKYHLYVCPKDGKGYLEH Sbjct: 61 VIESYDLLPDIIERLEKKGYHHQGDLGVEGREAFQRNNEDNFMKYHLYVCPKDGKGYLEH 120 Query: 124 IALRDYMRLNPAAAREYEEVKLKLADQFRYDIDAYCEGKTEVVHSILRKAGYI 176 +ALRDY+ N A +EYEE+K +LA+ +RY+ID YCE KT+ V IL K YI Sbjct: 121 VALRDYLSANEGARKEYEELKYRLAENYRYNIDGYCEAKTDFVKGILNKTLYI 173 >C3B424.1 C3B424_BACMY Putative uncharacterized protein Length = 174 Score = 238 bits (607), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 108/173 (62%), Positives = 139/173 (80%) Query: 4 IAEKTKIVEVVPYDPAWKKEFIRLRDFLLEITGDLIIAAEHVGSTSVEGLSAKPIIDIDL 63 +AEKT+I+E++ Y+P WK EF +++ + GDLI+ EHVGSTSVEGL+AKPIIDID+ Sbjct: 1 MAEKTRIIEIMSYNPEWKMEFKKIKIMIESYIGDLILRIEHVGSTSVEGLAAKPIIDIDV 60 Query: 64 VMESYEVFPEIVQRLSQYGYVHQGDLGIEGREAFRREQEDGFMKYHLYVCPKDGKGYLEH 123 V+ESY++ P+I++RL + GY HQGDLG+EGREAF+R ED FMKYHLYVCPKDGKGYLEH Sbjct: 61 VIESYDLLPDIIERLEKEGYHHQGDLGVEGREAFQRNNEDNFMKYHLYVCPKDGKGYLEH 120 Query: 124 IALRDYMRLNPAAAREYEEVKLKLADQFRYDIDAYCEGKTEVVHSILRKAGYI 176 +ALRDY+ N A +EYEE+K +LA+ +RY+ID YCE KT+ V IL K YI Sbjct: 121 VALRDYLSANEGARKEYEELKYRLAENYRYNIDGYCEAKTDFVKGILNKTLYI 173 >C3ALY5.1 C3ALY5_BACMY Putative uncharacterized protein Length = 174 Score = 238 bits (607), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 108/173 (62%), Positives = 139/173 (80%) Query: 4 IAEKTKIVEVVPYDPAWKKEFIRLRDFLLEITGDLIIAAEHVGSTSVEGLSAKPIIDIDL 63 +AEKT+I+E++ Y+P WK EF +++ + GDLI+ EHVGSTSVEGL+AKPIIDID+ Sbjct: 1 MAEKTRIIEIMSYNPEWKMEFKKIKIMIESYIGDLILRIEHVGSTSVEGLAAKPIIDIDV 60 Query: 64 VMESYEVFPEIVQRLSQYGYVHQGDLGIEGREAFRREQEDGFMKYHLYVCPKDGKGYLEH 123 V+ESY++ P+I++RL + GY HQGDLG+EGREAF+R ED FMKYHLYVCPKDGKGYLEH Sbjct: 61 VIESYDLLPDIIERLEKEGYHHQGDLGVEGREAFQRNNEDNFMKYHLYVCPKDGKGYLEH 120 Query: 124 IALRDYMRLNPAAAREYEEVKLKLADQFRYDIDAYCEGKTEVVHSILRKAGYI 176 +ALRDY+ N A +EYEE+K +LA+ +RY+ID YCE KT+ V IL K YI Sbjct: 121 VALRDYLSANEGARKEYEELKYRLAENYRYNIDGYCEAKTDFVKGILNKTLYI 173 >Q8TK81.1 Q8TK81_METAC Putative uncharacterized protein Length = 186 Score = 215 bits (547), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 97/165 (58%), Positives = 128/165 (77%) Query: 10 IVEVVPYDPAWKKEFIRLRDFLLEITGDLIIAAEHVGSTSVEGLSAKPIIDIDLVMESYE 69 IV VVPYDP WK EF++++ +++ TGD I EHVGST+VEGL++KPIIDID+V++SY+ Sbjct: 20 IVRVVPYDPEWKTEFLKIKAMIVDCTGDFITGVEHVGSTAVEGLASKPIIDIDVVIDSYD 79 Query: 70 VFPEIVQRLSQYGYVHQGDLGIEGREAFRREQEDGFMKYHLYVCPKDGKGYLEHIALRDY 129 +FP + RLS+ G+ H+G+LGIEGRE+F+R D FM YHLYVCPKDGKGYLEHIA RDY Sbjct: 80 IFPAVKDRLSEIGFEHKGNLGIEGRESFKRTFIDDFMPYHLYVCPKDGKGYLEHIAFRDY 139 Query: 130 MRLNPAAAREYEEVKLKLADQFRYDIDAYCEGKTEVVHSILRKAG 174 +R +P A + Y E+K KLA+QFR DI Y +GK E + +IL+ Sbjct: 140 LRNHPEAVKAYGELKTKLAEQFRTDIIGYMDGKHEFLQNILKNVN 184 >Q46A39.1 Q46A39_METBF Putative uncharacterized protein Length = 173 Score = 210 bits (535), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 95/163 (58%), Positives = 126/163 (77%) Query: 10 IVEVVPYDPAWKKEFIRLRDFLLEITGDLIIAAEHVGSTSVEGLSAKPIIDIDLVMESYE 69 IV VVPY+P WK EF++++ +++ GDLI EHVGST+VEGL++KPIIDID+V++SY+ Sbjct: 8 IVRVVPYEPEWKNEFLKIKAMIVDCAGDLITGVEHVGSTAVEGLASKPIIDIDVVIDSYD 67 Query: 70 VFPEIVQRLSQYGYVHQGDLGIEGREAFRREQEDGFMKYHLYVCPKDGKGYLEHIALRDY 129 VFP++ RLS+ G+ H+G+LG+EGRE F+R D FM Y+LYVCPKDGKGYLEHI RDY Sbjct: 68 VFPDVKDRLSKIGFEHEGNLGVEGREVFKRTFIDDFMPYNLYVCPKDGKGYLEHIVFRDY 127 Query: 130 MRLNPAAAREYEEVKLKLADQFRYDIDAYCEGKTEVVHSILRK 172 +R +P A + Y E+K++LA QFR DI AY K E V SIL+ Sbjct: 128 LRTHPEAVKVYGELKVRLAKQFRTDITAYINSKHEFVQSILKN 170 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.321 0.141 0.411 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,083,004,637 Number of extensions: 44366831 Number of successful extensions: 102777 Number of sequences better than 1.0e-05: 532 Number of HSP's gapped: 102263 Number of HSP's successfully gapped: 532 Length of query: 177 Length of database: 3,060,696,203 Length adjustment: 127 Effective length of query: 50 Effective length of database: 1,864,227,298 Effective search space: 93211364900 Effective search space used: 93211364900 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 126 (53.1 bits)