BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0472.0023.p (305 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B8FTH9.1 B8FTH9_DESHD Putative uncharacterized protein 203 2e-50 Q24RR6.1 Q24RR6_DESHY Putative uncharacterized protein 197 1e-48 B8FR56.1 B8FR56_DESHD Putative uncharacterized protein 197 1e-48 Q24PT3.1 Q24PT3_DESHY Putative uncharacterized protein 181 9e-44 Q24MW9.1 Q24MW9_DESHY Putative uncharacterized protein 175 4e-42 >B8FTH9.1 B8FTH9_DESHD Putative uncharacterized protein Length = 325 Score = 203 bits (516), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 121/322 (37%), Positives = 177/322 (54%), Gaps = 21/322 (6%) Query: 2 ELLNPRNDFLFKRIFGSEENRDVLLAFLNRTFAEAGKPPLSEIILLNPYTEKDSPRDKQS 61 E ++ + D+ FK IFG E N +L+AFLN + + EI ++NP K+ P DK+S Sbjct: 3 EFISLKIDYAFKLIFGKEGNEAILIAFLNAALKLPQERRIEEITIINPELNKEYPEDKKS 62 Query: 62 ILDIRARTTEGEIINVEMQLFNKYDTEKRTLFYWSKQYSGQLQEGQAYSRLKRCVTINIL 121 ILD+RA T++G IN+E+QL N+YD EKR+L+YW++ YS Q++EG AY L + V+INI+ Sbjct: 63 ILDVRAITSQGMQINIEIQLSNQYDMEKRSLYYWAQMYSRQIREGMAYKELTKTVSINIV 122 Query: 122 NYAFLP-NDLYHSVFHLREDRTGIELIDDIEVHFLELPKL----DEQAVSIEEGGLVNWL 176 ++ +L YH+VFHL ED +L D +E+HF+ELPKL ++ +S+ E LV WL Sbjct: 123 DFNYLKQTSSYHNVFHLYEDEEKFQLTDVLEIHFMELPKLLAKWRKREISLWENELVRWL 182 Query: 177 LFLKGADQSK----WEVLTMNEPVLKKAMNTLEFLSQNLEARRQYEDRQKYLHDEA---- 228 L L+GAD + E + M +PVL +AMN E S++ R Y DR+K + DE Sbjct: 183 LLLEGADNQEILQILEEIAMKDPVLYQAMNAWEETSEDPRIREAYFDRRKAILDEKAAIR 242 Query: 229 --------SMYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVARKLLAL 280 ++ VA+KLL L Sbjct: 243 EAELRLQEALEEGMAKGIAEGRAKGIAEGKAEGKAEGRAEGRAEGRAEGRAEVAKKLLVL 302 Query: 281 NVDLSVIAEASGLSEDEIKALK 302 +++ IAEA+GLSE+EI LK Sbjct: 303 GFEITKIAEATGLSEEEISGLK 324 >Q24RR6.1 Q24RR6_DESHY Putative uncharacterized protein Length = 308 Score = 197 bits (500), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 119/310 (38%), Positives = 171/310 (55%), Gaps = 21/310 (6%) Query: 2 ELLNPRNDFLFKRIFGSEENRDVLLAFLNRTFAEAGKPPLSEIILLNPYTEKDSPRDKQS 61 E ++ + D+ FK IFG E N +L+AFLN + + I ++NP K+ DK+S Sbjct: 10 EFISLKIDYAFKLIFGKEGNEAILIAFLNAALKLPQERRIEAITIMNPELNKEYQGDKKS 69 Query: 62 ILDIRARTTEGEIINVEMQLFNKYDTEKRTLFYWSKQYSGQLQEGQAYSRLKRCVTINIL 121 ILD+RA T+EG IN+E+QL N+YD EKR+L+YW++ YS Q++EG AY L + VTINIL Sbjct: 70 ILDVRAETSEGMQINIEIQLSNQYDMEKRSLYYWAEMYSRQIREGMAYKELAKAVTINIL 129 Query: 122 NYAFLPNDL-YHSVFHLREDRTGIELIDDIEVHFLELPKL----DEQAVSIEEGGLVNWL 176 ++ +L YH+VFHL ED +L D +E+HF+ELPKL + +S E LV WL Sbjct: 130 DFNYLKQTSNYHNVFHLYEDEEKFQLTDALEMHFMELPKLLAKWRNREISPWENELVRWL 189 Query: 177 LFLKGADQSK----WEVLTMNEPVLKKAMNTLEFLSQNLEARRQYEDRQKYLHDEASMYX 232 L L+GAD + E + M +PVL +AM E S + R Y DR+K + DE + Sbjct: 190 LLLEGADNQEILQTLEEIAMKDPVLHQAMTAWEETSDDPRIREAYFDRRKAVLDEKA--- 246 Query: 233 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVARKLLALNVDLSVIAEASG 292 VA+KLL L +++ +AEA+G Sbjct: 247 ---------AIREAELRLKEALEKGRAAGIAAGKAEGKAEVAKKLLDLGFEITKVAEATG 297 Query: 293 LSEDEIKALK 302 LSE +I++LK Sbjct: 298 LSEKDIRSLK 307 >B8FR56.1 B8FR56_DESHD Putative uncharacterized protein Length = 308 Score = 197 bits (500), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 119/310 (38%), Positives = 171/310 (55%), Gaps = 21/310 (6%) Query: 2 ELLNPRNDFLFKRIFGSEENRDVLLAFLNRTFAEAGKPPLSEIILLNPYTEKDSPRDKQS 61 E ++ + D+ FK IFG E N +L+AFLN + + I ++NP K+ DK+S Sbjct: 10 EFISLKIDYAFKLIFGKEGNEAILIAFLNAALKLPQERRIEAITIMNPELNKEYQGDKKS 69 Query: 62 ILDIRARTTEGEIINVEMQLFNKYDTEKRTLFYWSKQYSGQLQEGQAYSRLKRCVTINIL 121 ILD+RA T+EG IN+E+QL N+YD EKR+L+YW++ YS Q++EG AY L + VTINIL Sbjct: 70 ILDVRAETSEGMQINIEIQLSNQYDMEKRSLYYWAEMYSRQIREGMAYKELAKAVTINIL 129 Query: 122 NYAFLPNDL-YHSVFHLREDRTGIELIDDIEVHFLELPKL----DEQAVSIEEGGLVNWL 176 ++ +L YH+VFHL ED +L D +E+HF+ELPKL + +S E LV WL Sbjct: 130 DFNYLKQTSNYHNVFHLYEDEEKFQLTDALEMHFMELPKLLAKWRNREISPWENELVRWL 189 Query: 177 LFLKGADQSK----WEVLTMNEPVLKKAMNTLEFLSQNLEARRQYEDRQKYLHDEASMYX 232 L L+GAD + E + M +PVL +AM E S + R Y DR+K + DE + Sbjct: 190 LLLEGADNQEILQTLEEIAMKDPVLHQAMTAWEETSDDPRIREAYFDRRKAVLDEKA--- 246 Query: 233 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVARKLLALNVDLSVIAEASG 292 VA+KLL L +++ +AEA+G Sbjct: 247 ---------AIREAELRLKEALEKGRAAGIAAGKAEGKAEVAKKLLDLGFEITKVAEATG 297 Query: 293 LSEDEIKALK 302 LSE +I++LK Sbjct: 298 LSEKDIRSLK 307 >Q24PT3.1 Q24PT3_DESHY Putative uncharacterized protein Length = 288 Score = 181 bits (458), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 100/229 (43%), Positives = 147/229 (64%), Gaps = 6/229 (2%) Query: 4 LNPRNDFLFKRIFGSEENRDVLLAFLNRTFAEAGKPPLSEIILLNPYTEKDSPRDKQSIL 63 LN ND+LFK +FG EN+++LL+FLN + G+ L++I L + + DK S L Sbjct: 5 LNRINDYLFKWVFGRPENKEILLSFLNSVLSPNGQDELADITLAERELDPEHIHDKLSRL 64 Query: 64 DIRARTTEGEIINVEMQLFNKYDTEKRTLFYWSKQYSGQLQEGQAYSRLKRCVTINILNY 123 DI + +G IIN+E+Q+ N+YD +KRTL+YW+K Y GQLQ+GQ Y L R +T+N+LN+ Sbjct: 65 DILGKGNDGSIINIEVQIANQYDIDKRTLYYWAKLYQGQLQKGQRYKDLSRTITVNVLNF 124 Query: 124 AFLPNDL-YHSVFHLREDRTGIELIDDIEVHFLELPKLDEQAVSIE-EGGLVNWLLFLKG 181 FLP+ YHS+F L E +G L D+E+HFLEL K +A+S++ + L WL++L Sbjct: 125 GFLPDSQKYHSMFSLYEAHSGYRLNRDLEIHFLELSKW--KALSVKPKTRLDKWLMYLSN 182 Query: 182 ADQSKWEVLTMNEPVLKKAMNTLE-FLSQNLEARRQYEDRQKYLHDEAS 229 + + E + M+EP ++KA+ E FL Q+ E R YE R+K L D S Sbjct: 183 TNPQEMEEIAMSEPAIRKALTAEEIFLKQDKE-RYLYEMREKALLDHVS 230 >Q24MW9.1 Q24MW9_DESHY Putative uncharacterized protein Length = 295 Score = 175 bits (444), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 96/230 (41%), Positives = 144/230 (62%), Gaps = 4/230 (1%) Query: 2 ELLNPRNDFLFKRIFGSEENRDVLLAFLNRTFAEAGKPPLSEIILLNPYTEKDSPRDKQS 61 E LN ND+LFK IFG +EN+D+LL+FLN + AG+ L++I L + + + +DK S Sbjct: 5 ERLNRINDYLFKYIFGRQENKDILLSFLNAVLSPAGEDELTDITLSDRELDPEHLKDKMS 64 Query: 62 ILDIRARTTEGEIINVEMQLFNKYDTEKRTLFYWSKQYSGQLQEGQAYSRLKRCVTINIL 121 LDI +G +IN+E+Q+ ++ + +KRTL+YW+K Y QLQ G Y L R VT+N+L Sbjct: 65 RLDILGVANDGSLINIEVQIASEKNIDKRTLYYWAKIYQSQLQSGMLYKDLARTVTVNVL 124 Query: 122 NYAFLPN-DLYHSVFHLREDRTGIELIDDIEVHFLELPKLDEQAVSIE-EGGLVNWLLFL 179 N++FLP+ YHS+F L E +G+ L D+E+HFLEL K +A+S + L WL++L Sbjct: 125 NFSFLPDAQRYHSMFSLYEAHSGLRLNRDLEIHFLELEKW--KALSTKPRTRLDKWLMYL 182 Query: 180 KGADQSKWEVLTMNEPVLKKAMNTLEFLSQNLEARRQYEDRQKYLHDEAS 229 D + E + M+EP + KA+ E +N + R YE R+K + D S Sbjct: 183 SNTDPKELEEIAMSEPAIGKALTVEEIFLKNDKERYLYEMREKGIRDHLS 232 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.318 0.136 0.385 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,494,718,743 Number of extensions: 57244191 Number of successful extensions: 131501 Number of sequences better than 1.0e-05: 489 Number of HSP's gapped: 130851 Number of HSP's successfully gapped: 489 Length of query: 305 Length of database: 3,060,696,203 Length adjustment: 135 Effective length of query: 170 Effective length of database: 1,788,859,178 Effective search space: 304106060260 Effective search space used: 304106060260 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 131 (55.1 bits)