BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0472.0008.p (539 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value A6X7U8.1 A6X7U8_OCHA4 4-phytase EC=3.1.3.26 204 2e-50 C4CKS8.1 C4CKS8_9CHLR ABC-type dipeptide transport system, perip... 198 1e-48 C3J744.1 C3J744_9BACI 4-phytase EC=3.1.3.26 186 7e-45 B7Y9K9.1 B7Y9K9_9BACI 4-phytase EC=3.1.3.26 186 7e-45 C1D3V1.1 C1D3V1_DEIDV Putative dipeptide ABC transporter, peripl... 185 1e-44 >A6X7U8.1 A6X7U8_OCHA4 4-phytase EC=3.1.3.26 Length = 502 Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 134/450 (29%), Positives = 221/450 (49%), Gaps = 5/450 (1%) Query: 92 VFESLVAFDSKGEIVD-WLAKSHSISEDGLTYTFVLRDGLKFSNGTEVTAEDAVFSLNRH 150 +F++LV D GE ++ LA+S ++S DGLT F LRD KFS+GT VTAED FS+ R Sbjct: 56 IFDTLVRPDKTGEKLEPGLAESWTVSPDGLTLKFKLRDA-KFSDGTPVTAEDVKFSIERA 114 Query: 151 L-KVGGPLEISAKVDTIKAQDKQTLVITLKEPYTPFISELSNFSNGILPNNFGGVTEAEF 209 K G + + + + L EP+TP + L F+ ILP A F Sbjct: 115 ASKESGWGRFYRPITGFEIVSPHEITMKLAEPFTPAFNNLGLFAAAILPKAQVEAKGAAF 174 Query: 210 FKKPVGTGPFVVESWDPAGDLTFTKNPNYWQEGKPYIDKLVYKLIEDDSQAINQLKAGEV 269 F PVG+GPF+++SW + KNP+YWQ+GKP++D+ ++ + S +L+AGEV Sbjct: 175 FDAPVGSGPFMLKSWVRGSKVELAKNPHYWQQGKPFVDEARLDVVTEPSVRAIKLEAGEV 234 Query: 270 NAIESLALQNANEIKNGTDTAVLTNGSWVTEQLFFNTLDEHFKDVHVXXXXXXXXXXXGL 329 + + E+ N +V + + + NT + F D V L Sbjct: 235 DVALDPPVNQLKELGNKEGISVGQTIPYRADFVQLNTTRKPFDDERVRQALNYAIDKNAL 294 Query: 330 TKALTFGYAQTANSLLPTTIPYNGNDTIKPLNFNVDEAKAELAKSAFPNGFSTKLLVASG 389 + + +G + A S +P + N + P +++ +AKA L + + GF +L+V SG Sbjct: 295 VQGVLYGAGKPAASAMPVMAYADAN--LTPYPYDLAKAKALLTDAGYAGGFEAQLVVDSG 352 Query: 390 NSTRXXXXXXXXXXXXXXXXKIEIESVELAAFRERFFAYDFAAMLNSGQADSPEANSILA 449 +T K++++ +E E A ++ ++ +D+ + + I+ Sbjct: 353 AATSRNAAIALQAMLQQIGVKLKVQMLEGGTQWETTKAGNYDMSVSYTTSDTIDPDQIIG 412 Query: 450 FQTDPKGFSKSYWTHYTNDEVTKLLYEGQKTADGDGRAEIYSKLLQTLADEVPYIPLYYP 509 F + +Y T + ND + +L E +KTADG+ R ++ +++ L D PYI LY+P Sbjct: 413 FVAVNPERANAYHTQWKNDRLNELYAEERKTADGEKRGAMFKEMIGILHDGAPYIFLYHP 472 Query: 510 DILIGARSSVQDLTVLPNGSVRLEAVSISK 539 RS+V+ VLP + RLE V + K Sbjct: 473 ATAWAVRSNVKGFEVLPTSNFRLEDVKLEK 502 >C4CKS8.1 C4CKS8_9CHLR ABC-type dipeptide transport system, periplasmic component Length = 555 Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 126/464 (27%), Positives = 232/464 (50%), Gaps = 6/464 (1%) Query: 72 VTSFDLHNEITSNNAFAIDKVFESLVAFDSKGEIVD-WLAKSHSISEDGLTYTFVLRDGL 130 VTSFD + + + + +++ LV G+ V+ LA++ +S+DGLTYTF LR+ Sbjct: 88 VTSFDPIIPTDNMSIWTMVLIYDQLVRNAPDGQSVEPGLAETWEVSDDGLTYTFNLREA- 146 Query: 131 KFSNGTEVTAEDAVFSLNRHLKVGGPLE--ISAKVDTIKAQDKQTLVITLKEPYTPFISE 188 F +G+ VTAEDAV+SL R ++ I VDT++A D++T+ + + + PF+++ Sbjct: 147 TFHDGSPVTAEDAVYSLLRAVQEEDSQWGWIYQGVDTVEATDERTVTVKMSHTWAPFLAD 206 Query: 189 LSNFSNGILPNNFGGVTEAEFFKKPVGTGPFVVESWDPAGDLTFTKNPNYWQEGKPYIDK 248 ++ FS+ I+P F PVG+GPF SW+ + K NYW +PY+D+ Sbjct: 207 VALFSSSIIPKKLHEERGPALFDSPVGSGPFQFVSWEKNTSIKLKKWENYWDPERPYLDE 266 Query: 249 LVYKLIEDDSQAINQLKAGEVNAIESLALQNANEIKNGTDTAVLTNGSWVTEQLFFNTLD 308 L + ++ D + + + +AGE++ + ++ + +LT+G+ + + N Sbjct: 267 LEFLVLTDANTRMLKFQAGELDIATDVPFSQLEALEANPNYTILTDGAARFDYIGMNHTR 326 Query: 309 EHFKDVHVXXXXXXXXXXXGLTKALTFGYAQTANSLLPTTIPYNGNDTIKPLNFNVDEAK 368 + F D V + +++ FGY + AN++LP + Y+ D ++ +N+++AK Sbjct: 327 KPFDDKLVRQAINYAIDKEAIIQSVLFGYGEMANTMLPKML-YHA-DHVEGYPYNLEKAK 384 Query: 369 AELAKSAFPNGFSTKLLVASGNSTRXXXXXXXXXXXXXXXXKIEIESVELAAFRERFFAY 428 +A S+ P+GF+ +L+++SG+ I I VE + + A Sbjct: 385 ELMASSSAPDGFTAELIISSGDPVAQQVAQLVQSQLAEIGGTINIRLVEPGSATDDIRAL 444 Query: 429 DFAAMLNSGQADSPEANSILAFQTDPKGFSKSYWTHYTNDEVTKLLYEGQKTADGDGRAE 488 ++ + D + + ++ F G +K+ WT Y N+EV +L E D R E Sbjct: 445 NYDWSKSYYTTDIIDPDELVTFGMVSDGGTKAVWTGYKNEEVDRLAREAAAETDPARREE 504 Query: 489 IYSKLLQTLADEVPYIPLYYPDILIGARSSVQDLTVLPNGSVRL 532 +Y ++ + ++ P I LYYP + + +LP G+ RL Sbjct: 505 MYHRIQELTTEDAPVILLYYPTGRTAVQKYIHGFRILPTGNYRL 548 >C3J744.1 C3J744_9BACI 4-phytase EC=3.1.3.26 Length = 534 Score = 186 bits (471), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 135/495 (27%), Positives = 227/495 (45%), Gaps = 21/495 (4%) Query: 60 TGGTFVYGRPAAVTSFDLHNEITSNNAFAIDK-VFESLVAF-DSKGEIVDWLAKSHSISE 117 T T VYGR S D +T + + K +F++L+ + D+ + LA +IS+ Sbjct: 39 TQDTLVYGRGGDSVSLDPAT-VTDGESLKVTKNIFDTLLDYNDNDTSVKPALATEWTISK 97 Query: 118 DGLTYTFVLRDGLKFSNGTEVTAEDAVFSLNR-------------HLKVGGPLEISAKVD 164 DGLTYTF LR G+KF +GTE A+ VF+ R + G + S + Sbjct: 98 DGLTYTFKLRQGVKFHDGTEFNADAVVFNFERWANGNADKFPYYGSMFGGYKQDDSHVIK 157 Query: 165 TIKAQDKQTLVITLKEPYTPFISELSNFSNGILPNNFGGVTEAEFFKKPVGTGPFVVESW 224 +KA DK T+ LK P PF+ L+ I +F + PVGTGPFV + W Sbjct: 158 EVKALDKYTVQFVLKRPQAPFLKNLAMTPFAIASPEAVKKYGDKFGEHPVGTGPFVFKEW 217 Query: 225 DPAGDLTFTKNPNYWQEGKPYIDKLVYKLIEDDSQAINQLKAGEVNAIESLALQNANEIK 284 + KN +YW++G P +++L++ I D+S +N L GE++ +E L + +++ Sbjct: 218 KRNERIVLEKNKDYWEKGYPKLNQLIFVSIPDNSARLNALLKGEIDIMEDLNPTDLKQVE 277 Query: 285 NGTDTAVLTNGSWVTEQLFFNTLDEHFKDVHVXXXXXXXXXXXGLTKALTFGYAQTANSL 344 + + S + K+ V + A G A+ A + Sbjct: 278 GNKEFQIFKRPSMNVAYVGLTATRGPLKNKLVRQALNYAVDKKAIIDAFYAGQAEPAKNP 337 Query: 345 LPTTIPYNGNDTIKPLNFNVDEAKAELAKSAFPNGFSTKLLVASGNSTRXXXXXXXXXXX 404 +P +IP ND I+ F++++AK LAK+ +PNGF +L Sbjct: 338 MPPSIP-GYNDAIQDYPFDLNKAKELLAKAGYPNGFEIELWAMPVPRPYMPDGQKIAEAI 396 Query: 405 XXXXXKI----EIESVELAAFRERFFAYDFAAMLNSGQADSPEANSILAFQTDPKGFSKS 460 KI +I + E A + ++ + A L D+ +A++ L D + Sbjct: 397 QANFAKIGVKAKIVTYEWATYLDKLAKGEADAFLLGWTGDNGDADNFLYALLDKDSIGSN 456 Query: 461 YWTHYTNDEVTKLLYEGQKTADGDGRAEIYSKLLQTLADEVPYIPLYYPDILIGARSSVQ 520 +T+++NDE+ K+L E Q +D + R E+Y K + + +E P+IPL + L+ ++++Q Sbjct: 457 NYTYFSNDELHKILVEAQTVSDENKRNELYKKAQEIIKEEAPWIPLVHSTPLLAGKANIQ 516 Query: 521 DLTVLPNGSVRLEAV 535 P GS + V Sbjct: 517 GFNPHPTGSDKFTKV 531 >B7Y9K9.1 B7Y9K9_9BACI 4-phytase EC=3.1.3.26 Length = 534 Score = 186 bits (471), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 135/495 (27%), Positives = 227/495 (45%), Gaps = 21/495 (4%) Query: 60 TGGTFVYGRPAAVTSFDLHNEITSNNAFAIDK-VFESLVAF-DSKGEIVDWLAKSHSISE 117 T T VYGR S D +T + + K +F++L+ + D+ + LA +IS+ Sbjct: 39 TQDTLVYGRGGDSVSLDPAT-VTDGESLKVTKNIFDTLLDYNDNDTSVKPALATEWTISK 97 Query: 118 DGLTYTFVLRDGLKFSNGTEVTAEDAVFSLNR-------------HLKVGGPLEISAKVD 164 DGLTYTF LR G+KF +GTE A+ VF+ R + G + S + Sbjct: 98 DGLTYTFKLRQGVKFHDGTEFNADAVVFNFERWANGNADKFPYYGSMFGGYKQDDSHVIK 157 Query: 165 TIKAQDKQTLVITLKEPYTPFISELSNFSNGILPNNFGGVTEAEFFKKPVGTGPFVVESW 224 +KA DK T+ LK P PF+ L+ I +F + PVGTGPFV + W Sbjct: 158 EVKALDKYTVQFVLKRPQAPFLKNLAMTPFAIASPEAVKKYGDKFGEHPVGTGPFVFKEW 217 Query: 225 DPAGDLTFTKNPNYWQEGKPYIDKLVYKLIEDDSQAINQLKAGEVNAIESLALQNANEIK 284 + KN +YW++G P +++L++ I D+S +N L GE++ +E L + +++ Sbjct: 218 KRNERIVLEKNKDYWEKGYPKLNQLIFVSIPDNSARLNALLKGEIDIMEDLNPTDLKQVE 277 Query: 285 NGTDTAVLTNGSWVTEQLFFNTLDEHFKDVHVXXXXXXXXXXXGLTKALTFGYAQTANSL 344 + + S + K+ V + A G A+ A + Sbjct: 278 GNKEFQIFKRPSMNVAYVGLTATRGPLKNKLVRQALNYAVDKKAIIDAFYAGQAEPAKNP 337 Query: 345 LPTTIPYNGNDTIKPLNFNVDEAKAELAKSAFPNGFSTKLLVASGNSTRXXXXXXXXXXX 404 +P +IP ND I+ F++++AK LAK+ +PNGF +L Sbjct: 338 MPPSIP-GYNDAIQDYPFDLNKAKELLAKAGYPNGFEIELWAMPVPRPYMPDGQKIAEAI 396 Query: 405 XXXXXKI----EIESVELAAFRERFFAYDFAAMLNSGQADSPEANSILAFQTDPKGFSKS 460 KI +I + E A + ++ + A L D+ +A++ L D + Sbjct: 397 QANFAKIGVKAKIVTYEWATYLDKLAKGEADAFLLGWTGDNGDADNFLYALLDKDSIGSN 456 Query: 461 YWTHYTNDEVTKLLYEGQKTADGDGRAEIYSKLLQTLADEVPYIPLYYPDILIGARSSVQ 520 +T+++NDE+ K+L E Q +D + R E+Y K + + +E P+IPL + L+ ++++Q Sbjct: 457 NYTYFSNDELHKILVEAQTVSDENKRNELYKKAQEIIKEEAPWIPLVHSTPLLAGKANIQ 516 Query: 521 DLTVLPNGSVRLEAV 535 P GS + V Sbjct: 517 GFNPHPTGSDKFTKV 531 >C1D3V1.1 C1D3V1_DEIDV Putative dipeptide ABC transporter, periplasmic component Length = 503 Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 130/476 (27%), Positives = 228/476 (47%), Gaps = 15/476 (3%) Query: 61 GGTFVYGRPAAVTSFDLHNEITSNNAFAIDKVFESLVAFDSKGEIVDWLAKSHSISEDGL 120 GGT G A + D H +++A+ +++++SL+ GE +A+ ++S DG Sbjct: 27 GGTLRVGGQADIVGLDPHTVSAASSAWVAEQIYDSLLTVTPTGEPAPSIAQKWTVSSDGR 86 Query: 121 TYTFVLRDGLKFSNGTEVTAEDAVFSLNR--HLKVGGPLEIS-AKVDTIKAQDKQTLVIT 177 TYTF LR +KFS+G +T++D V+SL R K P + K+ +I A + T+VI Sbjct: 87 TYTFNLRPNVKFSDGKALTSKDVVYSLKRITDPKTASPRQNDLGKIASITAPNATTVVIK 146 Query: 178 LKEPYTPFISELSNFSNGILPNNFGGVTEAEFFKKPVGTGPFVVESWDPAGDLTFTKNPN 237 LKEP+ PF++++ GI+P+ + + KKP+G+GPF +W P +T +NP+ Sbjct: 147 LKEPFAPFLTKVGGSLMGIMPSGYAEANDVN--KKPMGSGPFKYAAWVPGDSVTLERNPH 204 Query: 238 YWQEGKPYIDKLVYKLIEDDSQAINQLKAGEVNAIESLALQNANEIKNGTDTAVLTN-GS 296 YW+ GKPY+DK+++K ++DD I ++ G V+ S+ + +K + ++ G+ Sbjct: 205 YWEAGKPYLDKVIFKALKDDVTRITNVQTGTVDLALSVPQNQVDTLKKSSSIKLVGGAGT 264 Query: 297 WVTEQLFFNTLDEHFKDVHVXXXXXXXXXXXGLTKALTFGYAQTANS--LLPTTIPYNGN 354 W + L N + F + V + + FG N + P+ Y Sbjct: 265 WY-DYLGLNLTKKPFGTLKVRQAISLALNRDVIVRTALFGKGTPINCGPIPPSHWAYA-- 321 Query: 355 DTIKPLNFNVDEAKAELAKSAFPNGFSTKLLVASGNSTRXXXXXXXXXXXXXXXXKIEIE 414 K N AK L+++ F NGF + V + ++ +++ Sbjct: 322 -DCKVQVANQARAKQLLSEAGFANGFDMTIKVGADYKSQVNIAQSIQAQLKPLKINVKVM 380 Query: 415 SVELAAFRERFFAYDFAAMLNSGQADSPEANSILAFQTDPKGFSKSYWTHYTNDEVTKLL 474 +E +F F +F A++ G S + + L +Q + K +++ V +LL Sbjct: 381 PMEWGSFLNDFNKKNFDAVV-LGWIGSVDPDDYLYYQF--RSGEKFNAQGFSDKTVDQLL 437 Query: 475 YEGQKTADGDGRAEIYSKLLQTLADEVPYIPLYYPDILIGARSSVQDLTVLPNGSV 530 +G++T D R EIY K Q +A++V Y+ L+ D R +VQ GS+ Sbjct: 438 DQGRRTVDKAKRREIYRKAQQRIAEQVGYVFLHINDQYEAFRPNVQGYVHYSTGSL 493 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.313 0.131 0.374 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,818,322,573 Number of extensions: 111173973 Number of successful extensions: 215764 Number of sequences better than 1.0e-05: 6517 Number of HSP's gapped: 205367 Number of HSP's successfully gapped: 6535 Length of query: 539 Length of database: 3,060,696,203 Length adjustment: 141 Effective length of query: 398 Effective length of database: 1,732,333,088 Effective search space: 689468569024 Effective search space used: 689468569024 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 134 (56.2 bits)