BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0472.0003.p (352 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B1W1R8.1 B1W1R8_STRGG Putative aspartate aminotransferase 211 6e-53 B5H3S7.1 B5H3S7_STRCL Aspartate aminotransferase 203 2e-50 Q829L2.1 Q829L2_STRAW Putative aspartate aminotransferase 201 9e-50 B5I8N4.1 B5I8N4_9ACTO Aspartate aminotransferase 194 1e-47 B5HJL2.1 B5HJL2_STRPR Purine catabolism protein pucG (Fragment) 179 4e-43 >B1W1R8.1 B1W1R8_STRGG Putative aspartate aminotransferase Length = 368 Score = 211 bits (538), Expect = 6e-53, Method: Compositional matrix adjust. Identities = 137/356 (38%), Positives = 198/356 (55%), Gaps = 15/356 (4%) Query: 10 PLSLAEFNTLTGLLSKLLYTQQPPVIIPGEAILGIEAVAAGIAAPGRTFVNVVTGPYGRL 69 PL+ F + +++LL T+Q VI GEA+L +E G A PG T +NVVTGPYG+ Sbjct: 10 PLTADRFAAIERRVARLLATEQDVVITQGEALLPLEGCIRGGARPGSTALNVVTGPYGQT 69 Query: 70 FGQWLERGGATVVEVKVPFDEVAKPDVIASAIEQY-QPDALSFVHAEVVTGGSNPAQDIF 128 FG WL GA VV++ VPF D +A A+ + + D +S VHAE TG +NP +I Sbjct: 70 FGNWLRDCGARVVDLTVPFHTAVTADQVAEALAGHPEIDFVSLVHAEAATGNTNPVAEIG 129 Query: 129 KLAQKYKLITVSDSVSAVGGEALNVDEWGVDFAVIGAQKALAGPNGVSSVSISPRGWEFL 188 ++ + + + + D+V++VG E L D WGVD VIGAQKA+ GP GVS+VS+S R WE L Sbjct: 130 EVVRGHGALFMLDAVASVGAEPLLPDAWGVDLCVIGAQKAMGGPAGVSAVSVSARAWERL 189 Query: 189 ESNPAAPRNSILSLLDLKPSPDGAAPLRVPPNIPTLEARALIAALTEVEEEGLQQVIKRH 248 +NPAAPR S LSLLD K A +P LE L A + +E+EG + V+ RH Sbjct: 190 AANPAAPRRSYLSLLDWKERWIDAGRTALPHAPAQLEMLGLEACVARIEDEGPETVMARH 249 Query: 249 ERXXXXXXXXXXXL--NLEPWQKDSRHYSTLTTTIRI-SGKEGLLIRQPTGIVAP----- 300 L LEP+ ++R + + TT+R +G + ++ P Sbjct: 250 ASAAAATRAGAVALGGGLEPYVHEARDAAPVATTLRAPAGTDAAVLVAGALAADPALPLV 309 Query: 301 -GDGELFGQLLRINHFGANASRDSVEKAIAALARLLGQ-----EPGEALQAVREVW 350 G G L +++R+NH+GA+A+R +V ++AAL +L + A +AV E W Sbjct: 310 AGGGALSKEMIRVNHYGADATRGAVLSSLAALGAVLADAGLPVDIEAARRAVSETW 365 >B5H3S7.1 B5H3S7_STRCL Aspartate aminotransferase Length = 366 Score = 203 bits (516), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 136/359 (37%), Positives = 197/359 (54%), Gaps = 21/359 (5%) Query: 10 PLSLAEFNTLTGLLSKLLYTQQPPVIIPGEAILGIEAVAAGIAAPGRTFVNVVTGPYGRL 69 PL+ F + ++ LL T+Q VI GEA+L +E A G T +NVVTGPYG+ Sbjct: 10 PLTAEHFARIAARVAALLDTEQDVVITQGEALLPLEGCIRSGARAGSTALNVVTGPYGQT 69 Query: 70 FGQWLERGGATVVEVKVPFDEVAKPDVIASAIEQY-QPDALSFVHAEVVTGGSNPAQDIF 128 FG WL GA VV+++VPF + + A+ + + D +S VHAE TG +NP +I Sbjct: 70 FGNWLRDCGARVVDLEVPFHTAVTAEQVERALAAHPEIDFVSLVHAEAATGNTNPVAEIG 129 Query: 129 KLAQKYKLITVSDSVSAVGGEALNVDEWGVDFAVIGAQKALAGPNGVSSVSISPRGWEFL 188 + +++ + + D+V++V E L D WGVD VIGAQKA+ GP GVS+VS+SPR WE Sbjct: 130 EAVRRHGALFMLDAVASVAAEPLLPDAWGVDLCVIGAQKAMGGPAGVSAVSVSPRAWERF 189 Query: 189 ESNPAAPRNSILSLLDLKPS-PDG--AAPLRVPPNIPTLEARALIAALTEVEEEGLQQVI 245 +NPAAPR S LSLLD K DG A L P LE AL A + +E EGL V+ Sbjct: 190 AANPAAPRRSYLSLLDWKERWIDGGRTALLHAPAQ---LEMLALEACVERIESEGLTAVM 246 Query: 246 K--RHERXXXXXXXXXXXLNLEPWQKDSRHYSTLTTTIRI-SGKEG------LLIRQPTG 296 + H LEP+ +++ + + TT+R +G + L P+ Sbjct: 247 ERHAHAAAATRAGALALGGGLEPYVYEAKDAAPVATTLRAPAGMDASALVTKALAADPSL 306 Query: 297 IVAPGDGELFGQLLRINHFGANASRDSVEKAIAALARLLGQ-----EPGEALQAVREVW 350 + G G L +++R+NH+G +A+R +V ++AAL L + +P A +AV EVW Sbjct: 307 PLIAGGGALAKEMIRVNHYGVDATRGAVRSSLAALGVALAEAGATVDPVAAGRAVSEVW 365 >Q829L2.1 Q829L2_STRAW Putative aspartate aminotransferase Length = 376 Score = 201 bits (511), Expect = 9e-50, Method: Compositional matrix adjust. Identities = 136/361 (37%), Positives = 193/361 (53%), Gaps = 21/361 (5%) Query: 8 FVPLSLAEFNTLTGLLSKLLYTQQPPVIIPGEAILGIEAVAAGIAAPGRTFVNVVTGPYG 67 PLS A F ++ +++LL T+Q VI+ GEA+L +E A PG T +NV+TGPYG Sbjct: 18 LAPLSAAHFASIEDRVARLLATEQDVVIMQGEALLPLEGAIRAAAGPGTTALNVITGPYG 77 Query: 68 RLFGQWLERGGATVVEVKVPFDEVAKPDVIASAIEQY-QPDALSFVHAEVVTGGSNPAQD 126 + FG WL GATV+++ VPF I A + + D +S VHAE TG +NP + Sbjct: 78 QTFGNWLRDCGATVIDLAVPFHTAVTAARIREAFAAHPEIDFVSLVHAEAATGNTNPVAE 137 Query: 127 IFKLAQKYKLITVSDSVSAVGGEALNVDEWGVDFAVIGAQKALAGPNGVSSVSISPRGWE 186 I +++ + D+V+++G E + D WGVD VIGAQKA+ GP GVS+VS+S R W Sbjct: 138 IGAAVREHGALFYLDAVASIGAEPVLPDAWGVDLCVIGAQKAMGGPAGVSAVSVSERAWA 197 Query: 187 FLESNPAAPRNSILSLLDLKPS-PDGA--APLRVPPNIPTLEARALIAALTEVEEEGLQQ 243 + +NPAAPR S LSLLD K DG A L P LE AL A + +E EGL+ Sbjct: 198 RMAANPAAPRRSYLSLLDWKERWVDGGRKALLHAPAQ---LEMLALEACVERIEAEGLEA 254 Query: 244 VIKRHERXXXXXXXXXXXL--NLEPWQKDSRHYSTLTTTIR----ISGKEGL---LIRQP 294 V+ RH L LEP+ ++ + + TT+R I E + L P Sbjct: 255 VMARHASAAAATRAGAVALGGGLEPYVHEAADAAPVATTLRTPAGIDASELVAKALASDP 314 Query: 295 TGIVAPGDGELFGQLLRINHFGANASRDSVEKAIAALARLLGQ-----EPGEALQAVREV 349 + G G L +++R+NH+G A+R V+ + AL L + + A +AV E Sbjct: 315 VLPLVAGGGALAREMVRVNHYGPGATRGVVQSCLGALGAALAEFGVPVDLEGARRAVAEA 374 Query: 350 W 350 W Sbjct: 375 W 375 >B5I8N4.1 B5I8N4_9ACTO Aspartate aminotransferase Length = 373 Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 129/331 (38%), Positives = 185/331 (55%), Gaps = 18/331 (5%) Query: 8 FVPLSLAEFNTLTGLLSKLLYTQQPPVIIPGEAILGIEAVAAGIAAPGRTFVNVVTGPYG 67 PL A+F ++ +++LL T+Q VI+ GEA+L +E A PG T +NV+TGPYG Sbjct: 15 LAPLGAAQFASIEDRVARLLRTEQDVVIMQGEALLPLEGAIRSTAGPGTTALNVITGPYG 74 Query: 68 RLFGQWLERGGATVVEVKVPFDEVAKPDVIASAIEQYQP-DALSFVHAEVVTGGSNPAQD 126 + FG WL GATV+++ VPF IA+A E++ D +S VHAE TG +NP + Sbjct: 75 QTFGDWLRDCGATVIDLAVPFHTAVTAAQIAAAFEEHPAIDFVSLVHAEAATGNTNPVAE 134 Query: 127 IFKLAQKYKLITVSDSVSAVGGEALNVDEWGVDFAVIGAQKALAGPNGVSSVSISPRGWE 186 I ++ ++ + D+V++VG E + D WGVD VIGAQKA+ GP GVS+VS+S R W Sbjct: 135 IGEVVRRQGALFYLDAVASVGAEPVLPDAWGVDLCVIGAQKAMGGPAGVSAVSVSERAWA 194 Query: 187 FLESNPAAPRNSILSLLDLKPS-PDGA--APLRVPPNIPTLEARALIAALTEVEEEGLQQ 243 + +NP APR S LSLLD K DG A L P LE AL A + +E +GL Sbjct: 195 RMAANPKAPRRSYLSLLDWKERWIDGGRKALLHAPAQ---LEMLALEACVERIEADGLDA 251 Query: 244 VIKRHERXXXXXXXXXXXL--NLEPWQKDSRHYSTLTTTIR----ISGKEGLLIR----Q 293 V+ RH L LEP+ + R + TT+R ++ E L+ R Sbjct: 252 VMGRHRAAAAATRAGARALGGGLEPYVHEDREAAPAATTLRAPSGVAASE-LVTRALSCD 310 Query: 294 PTGIVAPGDGELFGQLLRINHFGANASRDSV 324 P +A G G L +++R+NH+G +A+ +V Sbjct: 311 PALPLAAGGGALAKEMIRVNHYGVDATLGAV 341 >B5HJL2.1 B5HJL2_STRPR Purine catabolism protein pucG (Fragment) Length = 239 Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 93/200 (46%), Positives = 131/200 (65%), Gaps = 1/200 (0%) Query: 8 FVPLSLAEFNTLTGLLSKLLYTQQPPVIIPGEAILGIEAVAAGIAAPGRTFVNVVTGPYG 67 PL+ A F ++ ++ LL T+Q V++ GEA+L +E G A PG T +NVVTGPYG Sbjct: 8 LAPLTAAHFASIERGVAALLGTEQDVVVMQGEALLPLEGCIRGGAHPGSTALNVVTGPYG 67 Query: 68 RLFGQWLERGGATVVEVKVPFDEVAKPDVIASAIEQY-QPDALSFVHAEVVTGGSNPAQD 126 + FG WL GA VV+++VPF+ D +A A+ ++ + D +S VHAE TG +NP + Sbjct: 68 QTFGNWLRDCGAAVVDLEVPFNTAVNADQVARALAEHPEIDFVSLVHAEAATGNTNPVAE 127 Query: 127 IFKLAQKYKLITVSDSVSAVGGEALNVDEWGVDFAVIGAQKALAGPNGVSSVSISPRGWE 186 I ++ + + + + D+V++V E L D WGVD VIGAQKA+ GP GVS+VS+S R WE Sbjct: 128 IGEVVRAHGALFMLDAVASVAAEPLLPDAWGVDLCVIGAQKAMGGPAGVSAVSVSERAWE 187 Query: 187 FLESNPAAPRNSILSLLDLK 206 + +NPAAPR S LSLLD K Sbjct: 188 RIAANPAAPRGSYLSLLDWK 207 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.315 0.135 0.391 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,092,400,241 Number of extensions: 85935198 Number of successful extensions: 181160 Number of sequences better than 1.0e-05: 1160 Number of HSP's gapped: 180101 Number of HSP's successfully gapped: 1160 Length of query: 352 Length of database: 3,060,696,203 Length adjustment: 137 Effective length of query: 215 Effective length of database: 1,770,017,148 Effective search space: 380553686820 Effective search space used: 380553686820 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 132 (55.5 bits)