BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0471.0015.p
         (100 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B3KKT2.1 B3KKT2_9BACI Putative uncharacterized protein                 61   3e-08

>B3KKT2.1 B3KKT2_9BACI Putative uncharacterized protein
          Length = 99

 Score = 60.8 bits (146), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/96 (46%), Positives = 75/96 (78%)

Query: 1  MQRRQGNGLAIVLIVLGAIMLMGIALPLIHGMFRILFPVLLVVLGYYGIKSGRKIIGWVV 60
          M+  +GNG++I+LI LG ++L+G+  PL+  +F +L P+L+V LGYYGI+ G  ++GW++
Sbjct: 1  MRNSKGNGMSILLIGLGILVLLGVFGPLLGWLFSLLIPILMVALGYYGIRRGNTLMGWII 60

Query: 61 MFIGVMSLIAKLSWIIGPLLGIALVVWGISVLKGRR 96
          + IG++ L+ KLSW+IGP+LG+ L+++G+S LK  R
Sbjct: 61 LGIGIIWLMGKLSWLIGPILGVILIIYGVSRLKNGR 96


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.334    0.153    0.475 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 620,460,108
Number of extensions: 24268295
Number of successful extensions: 133380
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 133382
Number of HSP's successfully gapped: 2
Length of query: 100
Length of database: 3,060,696,203
Length adjustment: 69
Effective length of query: 31
Effective length of database: 2,410,646,168
Effective search space: 74730031208
Effective search space used: 74730031208
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (22.0 bits)
S2: 125 (52.8 bits)