BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0471.0012.p (233 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B0P862.1 B0P862_9FIRM Putative uncharacterized protein 323 7e-87 B8I6P7.1 B8I6P7_CLOCE ABC transporter related 322 1e-86 A8SVB1.1 A8SVB1_9FIRM Putative uncharacterized protein 321 3e-86 C0B7Y1.1 C0B7Y1_9FIRM Putative uncharacterized protein 321 4e-86 B0P860.1 B0P860_9FIRM Putative uncharacterized protein 320 5e-86 >B0P862.1 B0P862_9FIRM Putative uncharacterized protein Length = 225 Score = 323 bits (828), Expect = 7e-87, Method: Compositional matrix adjust. Identities = 156/221 (70%), Positives = 189/221 (85%), Gaps = 1/221 (0%) Query: 1 MPILKIEHLKKYYGKDPQTTVKALDDVSLSVEKGEFLAIVGTSGSGKSTLLHMLGGLDRA 60 M IL+ LKKYYG +P T +ALD V+LSVE+GEF+AIVGTSGSGKSTLL+M+GGLD Sbjct: 5 MSILQTTELKKYYGTEPNIT-RALDGVNLSVEQGEFVAIVGTSGSGKSTLLNMIGGLDVP 63 Query: 61 TAGKVIVDGNDIFAMSDEKLTIFRRRSVGFIFQSYNLVPILNVLENILLPIELDGGRVDQ 120 T+GKVIVDG D+ + DE+LTIFRRR +GFIFQ+YNLVP+LNV ENI+LP+ELDG +VD+ Sbjct: 64 TSGKVIVDGRDLSTLKDEQLTIFRRRKIGFIFQNYNLVPVLNVFENIVLPVELDGNKVDK 123 Query: 121 AYLDEVIRALGLQEKIHNLPSNLSGGQQQRVAIARALATKPSIILADEPTGNLDSKTSQE 180 ++ EV+R LGL++K++N+PSNLSGGQQQRVAIARAL +KP+I+LADEPTGNLDS TS + Sbjct: 124 KFMKEVVRMLGLEDKLNNMPSNLSGGQQQRVAIARALVSKPAIVLADEPTGNLDSMTSSD 183 Query: 181 VLILLKQLSEKFNQTIVMITHNESIAQTADRIIRIEDGHIV 221 VL LLK S KF+QT+VMITHN IAQ ADRIIRIEDG IV Sbjct: 184 VLSLLKVTSTKFHQTLVMITHNNEIAQLADRIIRIEDGKIV 224 >B8I6P7.1 B8I6P7_CLOCE ABC transporter related Length = 225 Score = 322 bits (826), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 157/223 (70%), Positives = 190/223 (85%), Gaps = 1/223 (0%) Query: 1 MPILKIEHLKKYYGKDPQTTVKALDDVSLSVEKGEFLAIVGTSGSGKSTLLHMLGGLDRA 60 M ILK + L+KYYGK + VKALD ++L + +GEF+A+VGTSGSGKSTLLHMLGGLD+A Sbjct: 1 MSILKTDGLRKYYGK-GENLVKALDGINLEILEGEFVAVVGTSGSGKSTLLHMLGGLDKA 59 Query: 61 TAGKVIVDGNDIFAMSDEKLTIFRRRSVGFIFQSYNLVPILNVLENILLPIELDGGRVDQ 120 T GKV V G + F M+DE+ T+FRRR++GFIFQ+YNLVPILNV ENI LP+ELDGG +D+ Sbjct: 60 TEGKVTVAGKEFFDMNDEQKTVFRRRNIGFIFQNYNLVPILNVYENITLPVELDGGTIDK 119 Query: 121 AYLDEVIRALGLQEKIHNLPSNLSGGQQQRVAIARALATKPSIILADEPTGNLDSKTSQE 180 A++D++I+ LGL K+ NLP+NLSGGQQQRVAIARALATKP+IILADEPTGNLDSKT E Sbjct: 120 AFIDDIIKTLGLGGKLTNLPNNLSGGQQQRVAIARALATKPAIILADEPTGNLDSKTGLE 179 Query: 181 VLILLKQLSEKFNQTIVMITHNESIAQTADRIIRIEDGHIVSG 223 V+ LLK S++F+QTIVMITHNE IAQ ADR+IRIEDG IV G Sbjct: 180 VVGLLKMTSKRFHQTIVMITHNEEIAQLADRVIRIEDGKIVGG 222 >A8SVB1.1 A8SVB1_9FIRM Putative uncharacterized protein Length = 225 Score = 321 bits (822), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 154/221 (69%), Positives = 190/221 (85%), Gaps = 1/221 (0%) Query: 1 MPILKIEHLKKYYGKDPQTTVKALDDVSLSVEKGEFLAIVGTSGSGKSTLLHMLGGLDRA 60 M IL+ LKKYYG P T +ALD V+LS+EKGEF+AIVGTSGSGKSTLL+M+GGLD Sbjct: 5 MSILQTTELKKYYGAKPNIT-RALDGVTLSIEKGEFVAIVGTSGSGKSTLLNMIGGLDVP 63 Query: 61 TAGKVIVDGNDIFAMSDEKLTIFRRRSVGFIFQSYNLVPILNVLENILLPIELDGGRVDQ 120 T+GKVIVDG ++ + DE+LTIFRRR +GFIFQ+YNLVP+LNV ENI+LP+ELDG +VD+ Sbjct: 64 TSGKVIVDGRELSTLKDEQLTIFRRRKIGFIFQNYNLVPVLNVYENIVLPVELDGNKVDK 123 Query: 121 AYLDEVIRALGLQEKIHNLPSNLSGGQQQRVAIARALATKPSIILADEPTGNLDSKTSQE 180 ++ EV++ LGL++K++N+P+NLSGGQQQRVAIARAL +KP+I+LADEPTGNLDSKTS + Sbjct: 124 KFMKEVVQMLGLEDKLNNMPNNLSGGQQQRVAIARALVSKPAIVLADEPTGNLDSKTSAD 183 Query: 181 VLILLKQLSEKFNQTIVMITHNESIAQTADRIIRIEDGHIV 221 VL LLK S+KF+QT+VMITHN IAQ ADRIIRIEDG IV Sbjct: 184 VLGLLKTTSQKFHQTLVMITHNNEIAQLADRIIRIEDGKIV 224 >C0B7Y1.1 C0B7Y1_9FIRM Putative uncharacterized protein Length = 225 Score = 321 bits (822), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 154/221 (69%), Positives = 189/221 (85%), Gaps = 1/221 (0%) Query: 1 MPILKIEHLKKYYGKDPQTTVKALDDVSLSVEKGEFLAIVGTSGSGKSTLLHMLGGLDRA 60 M IL+ LKKYYG P T +ALD V+LS+EKGEF+AIVGTSGSGKSTLL+M+GGLD Sbjct: 5 MSILQTTELKKYYGAKPNIT-RALDGVTLSIEKGEFVAIVGTSGSGKSTLLNMIGGLDVP 63 Query: 61 TAGKVIVDGNDIFAMSDEKLTIFRRRSVGFIFQSYNLVPILNVLENILLPIELDGGRVDQ 120 T+GKVIVDG ++ + DE+LTIFRRR +GFIFQ+YNLVP+LNV ENI+LP+ELDG +VD+ Sbjct: 64 TSGKVIVDGRELSTLKDEQLTIFRRRKIGFIFQNYNLVPVLNVYENIVLPVELDGNKVDK 123 Query: 121 AYLDEVIRALGLQEKIHNLPSNLSGGQQQRVAIARALATKPSIILADEPTGNLDSKTSQE 180 ++ EV++ LGL++K++N+P+NLSGGQQQRVAIARAL +KP+I+LADEPTGNLDSKTS + Sbjct: 124 KFMKEVVQMLGLEDKLNNMPNNLSGGQQQRVAIARALVSKPAIVLADEPTGNLDSKTSSD 183 Query: 181 VLILLKQLSEKFNQTIVMITHNESIAQTADRIIRIEDGHIV 221 VL LLK S+KF QT+VMITHN IAQ ADRIIRIEDG IV Sbjct: 184 VLGLLKVTSQKFQQTLVMITHNNEIAQLADRIIRIEDGKIV 224 >B0P860.1 B0P860_9FIRM Putative uncharacterized protein Length = 225 Score = 320 bits (821), Expect = 5e-86, Method: Compositional matrix adjust. Identities = 151/221 (68%), Positives = 192/221 (86%), Gaps = 1/221 (0%) Query: 1 MPILKIEHLKKYYGKDPQTTVKALDDVSLSVEKGEFLAIVGTSGSGKSTLLHMLGGLDRA 60 M IL+ LKKYYG +P T +ALD V+LS+EKGEF+AIVGTSGSGKSTLL+M+GGLD Sbjct: 5 MSILQTTELKKYYGAEPNIT-RALDGVTLSIEKGEFVAIVGTSGSGKSTLLNMIGGLDVP 63 Query: 61 TAGKVIVDGNDIFAMSDEKLTIFRRRSVGFIFQSYNLVPILNVLENILLPIELDGGRVDQ 120 T+G+V+VDG ++ + DE+LT+FRRR +GFIFQ+YNLVP+LNV ENI+LP+ELDG +VD+ Sbjct: 64 TSGQVVVDGKELSKLKDEELTVFRRRKIGFIFQNYNLVPVLNVFENIVLPVELDGNKVDK 123 Query: 121 AYLDEVIRALGLQEKIHNLPSNLSGGQQQRVAIARALATKPSIILADEPTGNLDSKTSQE 180 +++EV++ LGL++K++N+P+NLSGGQQQRVAIARAL +KP+I+LADEPTGNLDSKTS + Sbjct: 124 KFMNEVVQMLGLEDKLNNMPNNLSGGQQQRVAIARALVSKPAIVLADEPTGNLDSKTSAD 183 Query: 181 VLILLKQLSEKFNQTIVMITHNESIAQTADRIIRIEDGHIV 221 VL LLK S+KF+QT+VMITHN IAQ ADRIIRIEDG IV Sbjct: 184 VLGLLKTTSQKFHQTLVMITHNSEIAQLADRIIRIEDGKIV 224 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.316 0.135 0.367 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,342,643,040 Number of extensions: 54279624 Number of successful extensions: 528075 Number of sequences better than 1.0e-05: 100678 Number of HSP's gapped: 391318 Number of HSP's successfully gapped: 111433 Length of query: 233 Length of database: 3,060,696,203 Length adjustment: 131 Effective length of query: 102 Effective length of database: 1,826,543,238 Effective search space: 186307410276 Effective search space used: 186307410276 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 129 (54.3 bits)