BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0471.0011.p (842 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B1B9E4.1 B1B9E4_CLOBO Efflux ABC transporter, permease protein 355 2e-95 B8I716.1 B8I716_CLOCE Putative uncharacterized protein 297 3e-78 C1FSZ4.1 C1FSZ4_CLOBJ Efflux ABC transporter, permease protein 296 9e-78 B1Q5Y0.1 B1Q5Y0_CLOBO Efflux ABC transporter, permease protein 293 6e-77 B8FS45.1 B8FS45_DESHD Putative uncharacterized protein 291 1e-76 >B1B9E4.1 B1B9E4_CLOBO Efflux ABC transporter, permease protein Length = 771 Score = 355 bits (910), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 241/808 (29%), Positives = 411/808 (50%), Gaps = 60/808 (7%) Query: 58 MKTSGTDFHGGFKYLTPAQAETLKKHSSIREYGVSLNAGDLRNEVFKDNRVEVKQIDESY 117 M+ SG HG KYL + L+ + +I++ S G N + E++ + Sbjct: 1 MRQSGGSAHGTLKYLKDGEFNKLRSNPNIKQIEYSKMVGMAENRELLKHHTEIQFATDED 60 Query: 118 ARHSFVNFIEGGLPAAENEVVLNTWVMDKLGIPHSLGQKATLDIDIGERVVRQDFIVSGY 177 A+ +F +G +P +E+ +T V+D LGIP +G+ T++ I + + F++ GY Sbjct: 61 AKMNFSYPTKGTMPRKIDELATDTMVLDLLGIPKEIGKSITINYSINNKKFSRKFVLVGY 120 Query: 178 YDADKNLSIAGLAFVSEAW---VQKNLSSIDPVKSKASGSYVNTTELSVMFSNAVDIEKK 234 ++ DK +S A + +VS+ + + KN ++ +K+K G+ +MF N+ ++E+K Sbjct: 121 WEHDK-VSPASMIYVSKKFTDDIFKNFNT--DIKNKNIGT--GFIFADIMFKNSFNLERK 175 Query: 235 LNKVLADTGLDVP--------IGINWAYTTSSLTDNITKVVPYLAVILIIMLSGYLLIYN 286 + KV+ ++G V G+NWAY +++ ++ ++ A+I++I+ +GY++IYN Sbjct: 176 MQKVITESGYSVEKNDNNYIAYGVNWAYMSTNFKLDLVSILSITAIIVLIIFTGYMIIYN 235 Query: 287 IFYISVVRDVKFYGLLKAIGTTPRQLKKIITIQSQXXXXXXXXXXXXXXXXXXXXXXXXX 346 IF IS+ +D++FYGLLK IGTT +Q+KKI+ + Q Sbjct: 236 IFQISIFKDIRFYGLLKTIGTTSKQIKKIV--RKQAFLLSTIGIPIGLIIGFILGAIFLP 293 Query: 347 XXXXXXXVETSY-SNSPWIFIGGAVFAYLTVWIAASKPGRMAARIAPVEAVRFAG-VSAK 404 E +Y S SP IFIG VF+Y+TV+I++ KP ++A ++P+EAVR+ G +S Sbjct: 294 IIFKANDNEKAYVSFSPMIFIGATVFSYITVFISSRKPTKIAGNVSPIEAVRYTGEISNN 353 Query: 405 RKVNKRSKRGAKLYGMAFANLFRNKKKXXXXXXXXXXXXXXXXXXXXVISSLDVNKYLST 464 ++ K S RG K+Y MA +N+ RNKKK +I D++KY+S Sbjct: 354 KRTIKNSSRGGKIYRMALSNITRNKKKTCIVIISMPLSLILLNSVFTLIKGFDMDKYISK 413 Query: 465 FLSGDMVIRNKAIVLSAGEQSGDPYKLSGPFISKLGKIDGVERVDSVYFKFENYTIDDTI 524 F+S D VI A + ++S I K+ G + +Y+ EN + TI Sbjct: 414 FVSTDFVI-GHANYFNKNHFRSRTDEVSTKMIDKVQSQKGFMQGGKIYYNLENIS---TI 469 Query: 525 RAALKPLAEGAPSEPALTWVFKNNFIQLDLYGIDAGWYELVQKDVLEGSFDPQKFASGNY 584 ++ ++ L L LYG++ + L Q +++EG D +KF SGNY Sbjct: 470 QSNVENL--------------------LQLYGMED--FPLSQLNIVEGKLDLKKFKSGNY 507 Query: 585 VL-VTTSIKAGDT--DKSYYHPGDHIEYK---GLGKSYEVMAVLNYNALYAATTQVYSPY 638 ++ S GD +K Y+ GD + K G KSY+VMA + V + Sbjct: 508 IIEAVQSNDNGDIQWEKIKYNIGDKVILKLQDGTRKSYKVMAKAEIKNTFYVRYSVGTSS 567 Query: 639 GYNA---FFPSSELTRKLPAGSGPPMALSATLHVDPAKLDSVMQTTKSLAASSEELV-FK 694 A + PS+E + + P+ +S +VD + ++ K ++ E L+ ++ Sbjct: 568 NVLADTIYLPSNEFNKIVK----DPVIMSYIFNVDKNYIKNIEGFIKEYSSKVEPLMNYE 623 Query: 695 SREDYRQELGGFIRIFQTVGYGLSFVIALIGVLNYINTVITGVIARRNEFALLESIGMTK 754 S+ + + TVG LSF+I IG+LN+IN+++T +I+RR EFA+++S+GMT Sbjct: 624 SKNLFVSHFKDMQNMVLTVGGALSFIIGTIGILNFINSILTSIISRRREFAMIQSVGMTN 683 Query: 755 PQLKKVLVYEGLFNVLLTVSIISTLGVFLTYSISKSIADSMAFTVFHMGWLPFILAVPVL 814 QL K+++YEG F T+ I+ +G + + K ++ F + LP I+A P+L Sbjct: 684 RQLYKLVMYEGFFYAFFTIVIVLVMGSIFSCVVIKKAMVALWFCSYKFVILPLIIASPLL 743 Query: 815 AAIAYTVTLSSYRMLSKDTIVERLRQTE 842 I+ + YR + +TIVERLR+ E Sbjct: 744 ILISLVIAFVIYRCSNNETIVERLRELE 771 >B8I716.1 B8I716_CLOCE Putative uncharacterized protein Length = 831 Score = 297 bits (761), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 241/873 (27%), Positives = 419/873 (47%), Gaps = 75/873 (8%) Query: 1 MISTNNRKIVTRLSLKSLKASPMRNVAVICAXXXXXXXXXXXXXXXXXXNKSMELTQMKT 60 M T+NR ++ +++++++KA+ +RN+ VI A +S++L +++T Sbjct: 2 MFPTDNRLVIKKITVRTIKANKVRNIFVITAIALTAFLLSTIFSIGISGTESIQLQKIRT 61 Query: 61 SGTDFHGGFKYLTPAQAETLKKHSSIREYGVSLNAGD---------LRNEVFKDNRVEVK 111 GT HGG + T Q + LK I + G+ +AGD L +F ++ E + Sbjct: 62 MGTIEHGGLTFPTDEQIKKLKSLDYIEDVGIMAHAGDIIETPDMGNLSLSLFWFDKTEWE 121 Query: 112 QIDESYARHSFVNFIEGGLPAAENEVVLNTWVMDKLGIPHSLGQKATLDIDI-------- 163 ++ R +N I+G P NE++++ W++ ++GI + K +DI I Sbjct: 122 KL-----RVPAMNNIKGKYPQEYNEIMVSDWILKRIGITNP---KIGMDIPIKYGKVGGT 173 Query: 164 GERVVRQDFIVSGYYDADKNLSI--AGLAFVSEAWVQKNLSSIDPVKSKASGSYVNTTEL 221 ++F +S YY NL AG+ +VS+A++ KN + P S + Sbjct: 174 DSEATNENFKLSAYYTEYSNLRSGNAGMLYVSKAFLDKN--GVTPENSGTA--------- 222 Query: 222 SVMFSNAVDIEKKLNKVLADTGLDVPIGINWAYTTSSL-----TDNITKVVPYLAVILII 276 ++ F + +I ++ K+ +V N + L D ++ ++ A+IL I Sbjct: 223 TIRFKSQKNIGEQFEKL----SREVTASPNQKWKMVPLYETVNGDRLSTIIGLSALILFI 278 Query: 277 MLSGYLLIYNIFYISVVRDVKFYGLLKAIGTTPRQLKKIITIQSQXXXXXXXXXXXXXXX 336 MLS YLLIYN+ YISV +DV+FYGLLK +GTTP+Q++ I+T Q+ Sbjct: 279 MLSSYLLIYNVLYISVSKDVRFYGLLKTVGTTPKQIRAIVTGQAMRLTALGIPLGLALGA 338 Query: 337 XXXXXXXXXXXXXXXXXVETSYSNSPWIFIGGAVFAYLTVWIAASKPGRMAARIAPVEAV 396 S +P I++G AVF+ +T I++ KP MAA I+P+EAV Sbjct: 339 AVSFVAVPFALSGATIDTGIKISFNPIIYVGAAVFSLVTTLISSIKPAGMAATISPIEAV 398 Query: 397 RFAGVSAKRKVNKRSKRGAKLYGMAFANLFRNKKKXXXXXXXXXXXXXXXXXXXXVISSL 456 R+ G RK+ K SK G K+ MAF N+FRN+++ ++ S+ Sbjct: 399 RYTGTDVSRKLRKVSKVG-KVQKMAFRNVFRNRRRAAVVFLSLFMGITTFILVNTLVLSM 457 Query: 457 DVNKYLSTFLSGDMVIRNKAIVLSAGEQSGDPYKLSGPFISKLGKIDGVERVDSVYFKFE 516 D Y+++++ D + N + +G K F+S +I+G+ + V K Sbjct: 458 DTENYVNSYIDNDFTLTNNTFFQNG---TGIKQKFDNDFMSTFKRIEGITEIRKVSQKIV 514 Query: 517 NYTIDDTI-RAALKPLAEGAPSE-PALTWVFKN-NFIQLDLYGIDAGWYELVQKDVLEGS 573 DD + + L+ + ++ P + KN F +L G+D + + + K + E Sbjct: 515 TLKYDDNLYKEHLEEFGKRHNTQMPTGDEIEKNPRFFWSNLVGLDMEYIKKLNKTLGE-P 573 Query: 574 FDPQKFASGNYVLVTTSIKAGDTDKSYYHPGDHIEYKGLGKSYEVMAVLNYNALYAATTQ 633 D + F +G L +T+ + ++ G I + K Y L T Sbjct: 574 IDVEAFEAGRIALFSTN------NPKHFKVGSDIVFTADEKEYS----LKLGGFLPERTA 623 Query: 634 VYSPYGYNAF-FPSSELTRKLPAGSGPPMALSATLHVDPAKLDSVMQTTKSLAASSEELV 692 G + S++ +KL P+ S T++ + K V++ K L A+ E+ Sbjct: 624 FNGGMGPAPLVYISNDYMKKL---FNNPVFCSVTMNAEVDKEAHVLKQLKELTANDNEIS 680 Query: 693 FKSREDYRQELGGFIRIFQTVGYGLSFVIALIGVLNYINTVITGVIARRNEFALLESIGM 752 SR + ++ + +G G+S ++ALIG+LN++N ++TGV RR+EFA+LESIGM Sbjct: 681 LDSRLETLEQFRSSKTMLYILGGGMSLILALIGILNFVNVMVTGVNTRRHEFAVLESIGM 740 Query: 753 TKPQLKKVLVYEGLFNVLLTVSIISTLGVFLT---YSISKSIADSMAFTVFHMGWLPFIL 809 T QLK++L EGL +++ +++TLG L +S+ K AD + +F +P +L Sbjct: 741 TPRQLKRMLSLEGLIYAIISCGLVATLGAALNIWVFSLFKKQAD---YAIFTFPTIPLVL 797 Query: 810 AVPVLAAIAYTVTLSSYRMLSKDTIVERLRQTE 842 +V ++ A+ V +++Y +KDT+ ERLR E Sbjct: 798 SVVIVFAVCILVPVAAYVTTTKDTVTERLRSVE 830 >C1FSZ4.1 C1FSZ4_CLOBJ Efflux ABC transporter, permease protein Length = 836 Score = 296 bits (757), Expect = 9e-78, Method: Compositional matrix adjust. Identities = 227/860 (26%), Positives = 414/860 (48%), Gaps = 42/860 (4%) Query: 1 MISTNNRKIVTRLSLKSLKASPMRNVAVICAXXXXXXXXXXXXXXXXXXNKSMELTQMKT 60 M NN +V +L+ +S+K+S +N I A +++ + M+ Sbjct: 1 MFQNNNGAVVRKLTKRSIKSS--KNYIAIIAITLTTLLFTSMFTITGSLRAAIKDSDMRK 58 Query: 61 SGTDFHGGFKYLTPAQAETLKKHSSIREYGVSLNAGDLRNEVFKDNRVEVKQIDESYARH 120 GT H G K+LT + E K I S+ GD + F EV+ +++YA+ Sbjct: 59 LGTSAHAGLKHLTGEEYEKASKDKKIHNTSHSIIIGDAQGVSFHKLPTEVRWGEDNYAKW 118 Query: 121 SFVNFIEGGLPAAENEVVLNTWVMDKLGIPHSLGQKATLDIDIGERVVRQDFIVSGYYDA 180 +F +G +P ++ EV ++++V+D L IPH LG+K L + E++ FI+ G + Sbjct: 119 TFNFPTQGKMPTSKKEVAMSSFVLDALHIPHRLGEKIKLTVKTDEKIFTDTFILCGIWKG 178 Query: 181 DKNLSIAGLAFVSEAWVQKN-LSSIDPVKSKASGS--YVNTTELSVMFSNAVDIEKKLNK 237 D +AF W+ K+ + PV G + + +MF ++ +IEK +N+ Sbjct: 179 D------SVAFRQTIWLSKSYCDEVAPVIESKEGDSKFTGYIDSLIMFPSSWNIEKNINE 232 Query: 238 VLADTGLDVP-IGINWAYTTSSLTDNITKVVPYLAVILIIMLSGYLLIYNIFYISVVRDV 296 + ++ +D I +N AY T+ + ++ ++ +++II ++GYLLIYNIFYISV +D+ Sbjct: 233 LASNYNIDEEKIAVNSAYDTAEI--DVENLIVIAFILIIIFIAGYLLIYNIFYISVAQDI 290 Query: 297 KFYGLLKAIGTTPRQLKKIITIQSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVET 356 + YGLLK +G T +Q++K++ ++ + Sbjct: 291 RNYGLLKTVGMTSKQIRKMVRFKALILSCIGIPVGLILGWPIGRILVPYIINILGEDMRV 350 Query: 357 SYSNSPWIFIGGAVFAYLTVWIAASKPGRMAARIAPVEAVRFAGVSAK---RKVNKRSKR 413 +++P++FI A+F+ +TV+++ KP ++A++++ +EAVR+ G + K RK K + R Sbjct: 351 VTTSNPFVFIFAALFSLITVYLSCIKPAKVASKVSSIEAVRYNGTNKKIISRKKTKSTHR 410 Query: 414 GAKLYGMAFANLFRNKKKXXXXXXXXXXXXXXXXXXXXVISSLDVNKYLSTFLSGDMVIR 473 K MA ANL RN KK + S D +K++++ D + Sbjct: 411 -VKPLSMALANLRRNGKKVFVVVLSFALSLVILNSTYSYVHSFDFDKFVASTSISDFSVA 469 Query: 474 NKAIVLSAGEQSGDPYKLSG---PFISKLGKIDGVERVDSVYFKF-ENYTIDDT---IRA 526 +++I+ +S P+ SG FI+++ + G+ER+ ++Y Y +D ++ Sbjct: 470 DRSII-----KSSSPFNTSGVSNNFINEVKSLKGLERMGNIYMTTSRQYCTNDAYKRLKK 524 Query: 527 ALKPLAEGAPSEPALTWVFKNNFIQLDLYGIDAGWYELVQKDVLEGSFDPQKFASGNYVL 586 + L + E + F ++++G D E ++ V++GS D + +G + Sbjct: 525 HINSLDDKKKEEVMNYSIMVKKFSGVNVFGFDTWPSEYIK--VIDGSLDNNSWKNGEGIY 582 Query: 587 VTTSIKAGDTDKSYYHPGDHIEYK---GLGKSYEVMAVLNYNALYAATTQVYSPYGYNAF 643 VT D S Y PGD I+ G K+Y+V+A+++Y + + V G Sbjct: 583 VTPWKLVEDGKLSIYKPGDTIDVDFGDGKRKNYKVLAIVDYAEAFQSPQNV--DQGLEYI 640 Query: 644 FPSSELTRKLPAGSGPPMALSATLHVDPAKLDSVMQTTKSLAASSEE-LVFKSREDYRQE 702 PS E GS PM +VD LD + K + E L F SR+ +++ Sbjct: 641 LPSKEFLSNF--GSMKPM--RTIFNVDDKNLDKTEKWLKDYCTNKESSLDFWSRKTLQKQ 696 Query: 703 LGGFIRIFQTVGYGLSFVIALIGVLNYINTVITGVIARRNEFALLESIGMTKPQLKKVLV 762 ++ +G L ++A+IG+LN+IN++IT +I RR E A+L+++GMT Q++ +L+ Sbjct: 697 FSSLTIMYTAIGGALCLILAIIGILNFINSMITSIITRRRELAMLQAVGMTDKQIRSMLI 756 Query: 763 YEGLFNVLLTVSIISTLGVFLTYSISKSIADSMAFTVFHMGWLPFILAVPVLAAIAYTVT 822 EG +L + + LG ++ ++ + + + P +L + L I V Sbjct: 757 IEGSGYAVLGLVLSIILGSIANVTLVPALGADLYYFTWKFTLTPILLCIIPLILITALVP 816 Query: 823 LSSYRMLSKDTIVERLRQTE 842 + Y LSK ++VE+LR E Sbjct: 817 ILCYHRLSKGSVVEQLRIVE 836 >B1Q5Y0.1 B1Q5Y0_CLOBO Efflux ABC transporter, permease protein Length = 836 Score = 293 bits (749), Expect = 6e-77, Method: Compositional matrix adjust. Identities = 226/860 (26%), Positives = 414/860 (48%), Gaps = 42/860 (4%) Query: 1 MISTNNRKIVTRLSLKSLKASPMRNVAVICAXXXXXXXXXXXXXXXXXXNKSMELTQMKT 60 M NN +V +L+ +S+K+S +N I A +++ + M+ Sbjct: 1 MFQNNNGAVVRKLTKRSIKSS--KNYIAIIAITLTTLLFTSMFTITGSLRAAIKDSDMRK 58 Query: 61 SGTDFHGGFKYLTPAQAETLKKHSSIREYGVSLNAGDLRNEVFKDNRVEVKQIDESYARH 120 GT H G K+LT + E K I S+ GD + F EV+ +++YA+ Sbjct: 59 LGTSAHAGLKHLTGEEYEKASKDKKIHNTSHSIIIGDAQGVSFHKLPTEVRWGEDNYAKW 118 Query: 121 SFVNFIEGGLPAAENEVVLNTWVMDKLGIPHSLGQKATLDIDIGERVVRQDFIVSGYYDA 180 +F +G +P ++ EV ++++V+D L IPH LG+K L + E++ FI+ G + Sbjct: 119 TFNFPTQGKMPTSKKEVAMSSFVLDALHIPHRLGEKIKLTVKTDEKIFTDTFILCGIWKG 178 Query: 181 DKNLSIAGLAFVSEAWVQKN-LSSIDPVKSKASGS--YVNTTELSVMFSNAVDIEKKLNK 237 D +AF W+ K+ + PV G + + +MF ++ +IEK +N+ Sbjct: 179 D------SVAFRQTIWLSKSYCDEVAPVIESKEGDSKFTGYIDSLIMFPSSWNIEKNINE 232 Query: 238 VLADTGLDVP-IGINWAYTTSSLTDNITKVVPYLAVILIIMLSGYLLIYNIFYISVVRDV 296 + ++ +D I +N AY T+ + ++ ++ +++II ++GYLLIYNIFYISV +D+ Sbjct: 233 LASNYNIDEEKIAVNSAYDTAEI--DVENLIVIAFILIIIFIAGYLLIYNIFYISVAQDI 290 Query: 297 KFYGLLKAIGTTPRQLKKIITIQSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVET 356 + YGLLK +G T +Q++K++ ++ + Sbjct: 291 RNYGLLKTVGMTSKQIRKMVRFKALILSCIGIPVGLILGWPIGRILVPYIINILGEDMRV 350 Query: 357 SYSNSPWIFIGGAVFAYLTVWIAASKPGRMAARIAPVEAVRFAGVSAK---RKVNKRSKR 413 +++P++FI A+F+ +TV+++ KP ++A++++ +EAVR+ G + K RK K + R Sbjct: 351 VTTSNPFVFIFAALFSLITVYLSCIKPAKVASKVSSIEAVRYNGTNKKIISRKKTKSTHR 410 Query: 414 GAKLYGMAFANLFRNKKKXXXXXXXXXXXXXXXXXXXXVISSLDVNKYLSTFLSGDMVIR 473 K MA ANL RN KK + S D +K++++ D + Sbjct: 411 -VKPLSMALANLRRNGKKVFVVVLSFALSLVILNSTYSYVHSFDFDKFVASTSISDFSVA 469 Query: 474 NKAIVLSAGEQSGDPYKLSG---PFISKLGKIDGVERVDSVYFKF-ENYTIDDT---IRA 526 +++I+ +S P+ SG FI+++ + G+ER+ ++Y Y +D ++ Sbjct: 470 DRSII-----KSSSPFNTSGISNNFINEVKSLKGLERMGNIYMTTSRQYCTNDAYNRLKK 524 Query: 527 ALKPLAEGAPSEPALTWVFKNNFIQLDLYGIDAGWYELVQKDVLEGSFDPQKFASGNYVL 586 + L + E + F ++++G D E ++ V++GS D + +G + Sbjct: 525 YVNSLDDKKKEEVMNYSIMVKKFSGVNIFGFDTWPSEYIK--VIDGSLDNNSWKNGEGIY 582 Query: 587 VTTSIKAGDTDKSYYHPGDHIEYK---GLGKSYEVMAVLNYNALYAATTQVYSPYGYNAF 643 VT D S Y PGD I+ G K+Y+V+A+++Y + + V G Sbjct: 583 VTPWKFVEDGKLSIYKPGDTIDVDFGDGKRKNYKVLAIVDYAEAFQSPQNV--DQGLEYI 640 Query: 644 FPSSELTRKLPAGSGPPMALSATLHVDPAKLDSVMQTTKSLAASSEE-LVFKSREDYRQE 702 PS E GS PM +V+ LD + K + E L F SR+ +++ Sbjct: 641 LPSKEFLSNF--GSMKPM--RTIFNVNDKNLDKTEKWLKDYCTNKESSLDFWSRKTLQKQ 696 Query: 703 LGGFIRIFQTVGYGLSFVIALIGVLNYINTVITGVIARRNEFALLESIGMTKPQLKKVLV 762 ++ +G L ++A+IG+LN+IN++IT +I RR E A+L+++GMT Q++ +L+ Sbjct: 697 FSSLTIMYTAIGGALCLILAIIGILNFINSMITSIITRRRELAMLQAVGMTDKQIRSMLI 756 Query: 763 YEGLFNVLLTVSIISTLGVFLTYSISKSIADSMAFTVFHMGWLPFILAVPVLAAIAYTVT 822 EG +L + + LG ++ ++ + + + P +L + L I V Sbjct: 757 IEGSGYAVLGLVLSIILGSIANVTLVPALGADLYYFTWKFTLTPILLCIIPLILITALVP 816 Query: 823 LSSYRMLSKDTIVERLRQTE 842 + Y LSK ++VE+LR E Sbjct: 817 ILCYHRLSKGSVVEQLRIVE 836 >B8FS45.1 B8FS45_DESHD Putative uncharacterized protein Length = 831 Score = 291 bits (746), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 249/861 (28%), Positives = 403/861 (46%), Gaps = 49/861 (5%) Query: 1 MISTNNRKIVTRLSLKSLKASPMRNVAVICAXXXXXXXXXXXXXXXXXXNKSMELTQMKT 60 MI N K + L+ ++ + + RN+ + A +S + M Sbjct: 1 MIKVKNNKAIRTLADRNFRTAGTRNLIAVIAIALTAILFTSVFTMGFGLVESTQRASMIM 60 Query: 61 SGTDFHGGFKYLTPAQAETLKKHSSIREYGVSLNAGD-LRNEVFKDNRVEVKQIDESYAR 119 SG D H KY+T E +++H I E D + N+ E D+ + Sbjct: 61 SGGDGHAAVKYVTDEAYERIREHPLIEEMAYCRILSDSVDNQALIRRHTEFWYYDDVGLK 120 Query: 120 HSFVNFIEGGLPAAENEVVLNTWVMDKLGIPHSLGQKATLDIDIGERVVRQDFIVSGYYD 179 + F G P A NEV+ +T ++ LG+P +G TL+I + R V +DFI++G+++ Sbjct: 121 YGFAEPTGGHKPQAGNEVIADTKTLELLGVPLEVGAPLTLEITVHGRQVLRDFILAGWWE 180 Query: 180 ADKNLSIAGLAFVSEAWVQKNLSSIDPVKSKASGSYVNTTELSVMFSNAVDIEKKLNKVL 239 +D +I G F S A+V + + + S T + F+N+++I + L KV+ Sbjct: 181 SDPGFNI-GQIFASRAYVDAHRDELHYTYPEDK-SLTGTVTGYLKFANSLNIAENLEKVV 238 Query: 240 ADTGLD--------VPIGINWAYTTSSLTDNITKVVPYLAVILIIMLSGYLLIYNIFYIS 291 ++G + G+NWAY ++ + + + + +L+ +L+GYL+IYNIF IS Sbjct: 239 TESGFSMEEGDPNYLATGVNWAYLSTVVGMDAGTLTALASALLLFVLTGYLIIYNIFQIS 298 Query: 292 VVRDVKFYGLLKAIGTTPRQLKKIITIQS-QXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 350 V+RD++FYGLLK IGTT RQL+ II Q+ + Sbjct: 299 VLRDIRFYGLLKTIGTTGRQLRAIIRRQALRLSLIGIPLGLLAGFLVGKALVPYLMERSS 358 Query: 351 XXXVETSYSNSPWIFIGGAVFAYLTVWIAASKPGRMAARIAPVEAVRFAGV--SAKRKVN 408 S S P IF G A+FA TVWI+A KPG+MAA I+PVEAVR+ S+ +K+ Sbjct: 359 YAGSGVSVSPDPLIFAGAALFALFTVWISAHKPGKMAAGISPVEAVRYTDQERSSGKKL- 417 Query: 409 KRSKRGAKLYGMAFANLFRNKKKXXXXXXXXXXXXXXXXXXXXVISSLDVNKYLSTFLSG 468 K+S+ GAK + MA ANL RNK++ + S+D+NK L F Sbjct: 418 KKSRHGAKPWRMAMANLGRNKRRTVLVILSLSLSIVLTNTVFTISQSVDLNKGLEKFSDS 477 Query: 469 DMVIRNKAIVLSAGEQSGDPYKLSGPFISKLGKIDGVERVDSVYFKFENYTIDDTIRAAL 528 D ++ + L + G+ LS FIS G +G E +Y + +Y + Sbjct: 478 DFLLGHAN--LFNNQYDGESSALSESFISAAGAQEGFETGGRLYGSWASYQSGTS----- 530 Query: 529 KPLAEGAPSEPALTWVFKNNFIQLDLYGIDAGWYELVQKDVLEGSFDPQKFASGNYVLVT 588 A+ +P + + LYG++ + + +++G D +K A G+YVL Sbjct: 531 ---AQIMNRQP-------DGSLATALYGLEE--FPFSRLKLVDGELDREKLAGGDYVL-- 576 Query: 589 TSIKAGD-----TDKSYYHPGDHIEYKGLGKSYEVMAVLNYNALYAATTQVYSPYGYNAF 643 I+A D T + + GD I G +E M VL + T S G +AF Sbjct: 577 EGIQADDQGKVETGRFNHQVGDKITLNCGGTEWE-MTVLGHVVANPQTNTNGSWIG-SAF 634 Query: 644 FPSSELTRKLPAGSGPPMALSATLHVDPAKLDSVMQTTKSLAASSEELV-FKSREDYRQE 702 F +++ R+L S P +S +V A+ + K A E + + S+ Sbjct: 635 FLPADIYRELTGNSFP---MSYAFNVAEAQERDLENFLKRYTAEIEPTMNYSSKFTALSS 691 Query: 703 LGGFIRIFQTVGYGLSFVIALIGVLNYINTVITGVIARRNEFALLESIGMTKPQLKKVLV 762 L G +G L+ +I +IGVLN++N V+TG++ R E A+L+SIGMT+ QL +L Sbjct: 692 LEGLRNTAVLIGGSLAAIIGIIGVLNFVNAVLTGILTRHRELAMLQSIGMTRRQLVGMLC 751 Query: 763 YE-GLFNVLLTVSIISTLGVFLTYSISKSIADSMAFTVFHMGWLPFILAVPVLAAIAYTV 821 E G + L +S I L V + I + +++ + F + + P ++ +P+L + V Sbjct: 752 SEGGCYAALTGISSI-LLSVGFSLLILRPLSEQIWFLSYRFVFWPLLIILPLLFVLGALV 810 Query: 822 TLSSYRMLSKDTIVERLRQTE 842 + Y +K +IVERLR E Sbjct: 811 PYTVYYATAKQSIVERLRMAE 831 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.319 0.135 0.382 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 4,336,600,430 Number of extensions: 171858337 Number of successful extensions: 478437 Number of sequences better than 1.0e-05: 178 Number of HSP's gapped: 478265 Number of HSP's successfully gapped: 264 Length of query: 842 Length of database: 3,060,696,203 Length adjustment: 145 Effective length of query: 697 Effective length of database: 1,694,649,028 Effective search space: 1181170372516 Effective search space used: 1181170372516 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 136 (57.0 bits)