BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0471.0009.p (179 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3K5Z8.1 B3K5Z8_9BACI NADPH-dependent FMN reductase 327 2e-88 B1DCN2.1 B1DCN2_9BACL NADPH-dependent FMN reductase 327 4e-88 A3I6Z0.1 A3I6Z0_9BACI Putative reductase 268 1e-70 B1HZV0.1 B1HZV0_LYSSC Reductase 267 2e-70 Q2BCZ9.1 Q2BCZ9_9BACI Putative reductase 266 6e-70 >B3K5Z8.1 B3K5Z8_9BACI NADPH-dependent FMN reductase Length = 179 Score = 327 bits (839), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 158/179 (88%), Positives = 169/179 (94%) Query: 1 MSALNIGIILGSTRQGRLSPQVGEWVKGIADQRGDANYEIVDIADFKLPLLGEADASEQA 60 MS LNIGIILGSTRQGRLSPQVGEWVK IAD+RGDANYEIVDIAD+KLPLLGEADA+EQA Sbjct: 1 MSKLNIGIILGSTRQGRLSPQVGEWVKRIADERGDANYEIVDIADYKLPLLGEADATEQA 60 Query: 61 GRWNDKLNALDGFVFIVAEYNHSITGALKNALDYAREAWNNKAAGIVSYGSVGGARAAEH 120 WN KL +LDGFVFIV EYNHSI+G+LKNALDYAREAWNNKAAGIVSYGSVGGARAAEH Sbjct: 61 TAWNTKLASLDGFVFIVQEYNHSISGSLKNALDYAREAWNNKAAGIVSYGSVGGARAAEH 120 Query: 121 LRGILGELSIADVRIHPALSLFTDFENGQTFKPAELHLTNVNGMLDQVVAWSGALKTLR 179 LRGILGELS+ADVR+HPALSLFTDFENG FKPA+LHL N+NGMLDQV+AWSGALKTLR Sbjct: 121 LRGILGELSVADVRVHPALSLFTDFENGSVFKPADLHLVNLNGMLDQVLAWSGALKTLR 179 >B1DCN2.1 B1DCN2_9BACL NADPH-dependent FMN reductase Length = 180 Score = 327 bits (837), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 155/179 (86%), Positives = 168/179 (93%) Query: 1 MSALNIGIILGSTRQGRLSPQVGEWVKGIADQRGDANYEIVDIADFKLPLLGEADASEQA 60 MS LNIGIILGSTRQGR+ PQVGEWVKG+AD+RGDANYEIVD+AD+KLP+ GE DASEQA Sbjct: 1 MSNLNIGIILGSTRQGRVCPQVGEWVKGVADKRGDANYEIVDVADYKLPMFGEVDASEQA 60 Query: 61 GRWNDKLNALDGFVFIVAEYNHSITGALKNALDYAREAWNNKAAGIVSYGSVGGARAAEH 120 G WN KL LDGFVFIVAEYNHSIT +LKNALD+AR+AWNNKAAGIVSYGSVGGARAAEH Sbjct: 61 GAWNAKLAGLDGFVFIVAEYNHSITASLKNALDFARDAWNNKAAGIVSYGSVGGARAAEH 120 Query: 121 LRGILGELSIADVRIHPALSLFTDFENGQTFKPAELHLTNVNGMLDQVVAWSGALKTLR 179 LRGILGELS+ADVR+HPALSLFTDFENG FKPA+LHLTNVNGMLDQV+AWSGALKTLR Sbjct: 121 LRGILGELSVADVRVHPALSLFTDFENGSVFKPADLHLTNVNGMLDQVLAWSGALKTLR 179 >A3I6Z0.1 A3I6Z0_9BACI Putative reductase Length = 197 Score = 268 bits (685), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 133/181 (73%), Positives = 150/181 (82%), Gaps = 3/181 (1%) Query: 1 MSALNIGIILGSTRQGRLSPQVGEWVKGIADQRGDANYEIVDIADFKLPLLGEA--DASE 58 M+ LNIGII+GSTR+GR+SPQV +WVK IADQRGDANY ++DIAD+KLPLLGE DAS Sbjct: 18 MAELNIGIIIGSTREGRVSPQVAQWVKKIADQRGDANYTVIDIADYKLPLLGEPGQDAS- 76 Query: 59 QAGRWNDKLNALDGFVFIVAEYNHSITGALKNALDYAREAWNNKAAGIVSYGSVGGARAA 118 A W++ + DGFVFIV EYNHSITGALKNALDY R WNNKAAGIVSYGSVGGARAA Sbjct: 77 GAQAWSEVIAKQDGFVFIVQEYNHSITGALKNALDYLRVEWNNKAAGIVSYGSVGGARAA 136 Query: 119 EHLRGILGELSIADVRIHPALSLFTDFENGQTFKPAELHLTNVNGMLDQVVAWSGALKTL 178 EHLRGI+GEL IADVR+HPALSLFTDFENG FKP + +VN MLDQV+ WS AL T+ Sbjct: 137 EHLRGIMGELLIADVRVHPALSLFTDFENGSDFKPQAVQTDSVNQMLDQVIPWSKALYTI 196 Query: 179 R 179 R Sbjct: 197 R 197 >B1HZV0.1 B1HZV0_LYSSC Reductase Length = 197 Score = 267 bits (683), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 133/181 (73%), Positives = 150/181 (82%), Gaps = 3/181 (1%) Query: 1 MSALNIGIILGSTRQGRLSPQVGEWVKGIADQRGDANYEIVDIADFKLPLLGEA--DASE 58 M+ LNIGII+GSTR+GR+SPQV +WVK IADQRGDANY ++DIAD+KLPLLGE DAS Sbjct: 18 MAELNIGIIIGSTREGRVSPQVAQWVKEIADQRGDANYTVIDIADYKLPLLGEPGQDAS- 76 Query: 59 QAGRWNDKLNALDGFVFIVAEYNHSITGALKNALDYAREAWNNKAAGIVSYGSVGGARAA 118 A W++ + DGFVFIV EYNHSITGALKNALDY R WNNKAAGIVSYGSVGGARAA Sbjct: 77 GAQAWSEIIAKQDGFVFIVQEYNHSITGALKNALDYLRVEWNNKAAGIVSYGSVGGARAA 136 Query: 119 EHLRGILGELSIADVRIHPALSLFTDFENGQTFKPAELHLTNVNGMLDQVVAWSGALKTL 178 EHLRGI+GEL IADVR+HPALSLFTDFENG FKP + +VN MLDQV+ WS AL T+ Sbjct: 137 EHLRGIMGELLIADVRVHPALSLFTDFENGSDFKPKAVQADSVNQMLDQVIPWSKALYTI 196 Query: 179 R 179 R Sbjct: 197 R 197 >Q2BCZ9.1 Q2BCZ9_9BACI Putative reductase Length = 197 Score = 266 bits (680), Expect = 6e-70, Method: Compositional matrix adjust. Identities = 133/180 (73%), Positives = 151/180 (83%), Gaps = 1/180 (0%) Query: 1 MSALNIGIILGSTRQGRLSPQVGEWVKGIADQRGDANYEIVDIADFKLPLLGEADASEQA 60 M+ LNIGIILGSTR+GR+SPQVG WVK +AD+RGDANY I+DIAD+KLPLLGEA A Sbjct: 18 MTKLNIGIILGSTREGRVSPQVGAWVKEVADKRGDANYTIIDIADYKLPLLGEAGADASG 77 Query: 61 GR-WNDKLNALDGFVFIVAEYNHSITGALKNALDYAREAWNNKAAGIVSYGSVGGARAAE 119 W++ + A DGF+FIV EYNHSITGALKNALDY R WNNKAAGIVSYGSVGGARAAE Sbjct: 78 AAAWSEIVAAQDGFIFIVQEYNHSITGALKNALDYLRVEWNNKAAGIVSYGSVGGARAAE 137 Query: 120 HLRGILGELSIADVRIHPALSLFTDFENGQTFKPAELHLTNVNGMLDQVVAWSGALKTLR 179 HLRGILGELS+ADVR+HPALSLFTDFENG FKP E+ +VN MLDQ++ WS AL T+R Sbjct: 138 HLRGILGELSVADVRVHPALSLFTDFENGNQFKPKEVQEDSVNQMLDQLIPWSTALSTIR 197 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.318 0.135 0.399 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,102,690,493 Number of extensions: 44299329 Number of successful extensions: 106678 Number of sequences better than 1.0e-05: 555 Number of HSP's gapped: 106498 Number of HSP's successfully gapped: 555 Length of query: 179 Length of database: 3,060,696,203 Length adjustment: 127 Effective length of query: 52 Effective length of database: 1,864,227,298 Effective search space: 96939819496 Effective search space used: 96939819496 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 126 (53.1 bits)