BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0470.0040.p (194 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KHP6.1 B3KHP6_9BACI GCN5-related N-acetyltransferase 234 4e-60 A8F9L1.1 A8F9L1_BACP2 Possible acetyltransferase 138 3e-31 B4AMP7.1 B4AMP7_BACPU Putative acetyltransferase 134 4e-30 A3ICS1.1 A3ICS1_9BACI Putative uncharacterized protein 110 7e-23 B1HWB4.1 B1HWB4_LYSSC Putative acetyltransferase 107 5e-22 >B3KHP6.1 B3KHP6_9BACI GCN5-related N-acetyltransferase Length = 180 Score = 234 bits (596), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 119/180 (66%), Positives = 144/180 (80%), Gaps = 1/180 (0%) Query: 1 MSNSKEILIRNAADSDRDAIAKVLLEAYGQYAAELPEPFWAEYRRSILDSVHGTAPYARI 60 M++ +E+++R+A + +R+A+A V+LE+Y QYA +L W EYR SI S + APYARI Sbjct: 1 MNSIQEVIVRDAHEWEREAVAAVMLESYQQYAFDLSAERWEEYRNSIRSSAYSHAPYARI 60 Query: 61 VAEIDNRIVGSVLLFLSSEEAYGRPELGIRSPIIRLLAVSPSVRGRGIAVLLIREAARRS 120 VAE IVGSV LFLSSE AYG+PE+GI SPIIRLLAVSP RGRGIA LLI+EAARRS Sbjct: 61 VAEFGGEIVGSVQLFLSSEAAYGKPEMGIHSPIIRLLAVSPGSRGRGIATLLIQEAARRS 120 Query: 121 IGLGAATLNLHTSDMMASAVKLYERLGFQRAYETDIMNGDTLVKGYCLDL-GAFSLPHAL 179 I LGA TLNLHTSDMMASAVKLYERLGF+RAY+TDI+N +TLVKGY ++L G+ L AL Sbjct: 121 IQLGATTLNLHTSDMMASAVKLYERLGFERAYDTDIINNETLVKGYRIELPGSLLLQSAL 180 >A8F9L1.1 A8F9L1_BACP2 Possible acetyltransferase Length = 182 Score = 138 bits (347), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 68/164 (41%), Positives = 104/164 (63%), Gaps = 1/164 (0%) Query: 4 SKEILIRNAADSDRDAIAKVLLEAYGQYAAELPEPFWAEYRRSILDSVHGTAPYARIVAE 63 +E++IR A D +AI VL+++Y QY + E W Y ++ +V +VAE Sbjct: 3 QQELIIRQAVKEDHEAIRHVLIKSYSQYEPQFTEEGWQNYSAALAAAVDNPNMELMLVAE 62 Query: 64 IDNRIVGSVLLFLSSEEAYGRPELGIRSPIIRLLAVSPSVRGRGIAVLLIREAARRSIGL 123 ++ +IVG++ +F SSE+AY +PE+GI S I+R L V P VRG+GIA L+R++ + Sbjct: 63 LEGQIVGTLQMFRSSEQAYDKPEMGITSAIVRFLGVDPDVRGKGIAESLLRKSIELTQSW 122 Query: 124 GAATLNLHTSDMMASAVKLYERLGFQRAYETDIMNGD-TLVKGY 166 G L LHTSD M +A++LYER+GF+RA + + +N + T VK Y Sbjct: 123 GENVLYLHTSDKMQAAIRLYERMGFERALDKEFVNQNGTHVKSY 166 >B4AMP7.1 B4AMP7_BACPU Putative acetyltransferase Length = 182 Score = 134 bits (337), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 66/164 (40%), Positives = 103/164 (62%), Gaps = 1/164 (0%) Query: 4 SKEILIRNAADSDRDAIAKVLLEAYGQYAAELPEPFWAEYRRSILDSVHGTAPYARIVAE 63 +E++IR A D +AI VL+++Y QY + E W Y ++ +V +VAE Sbjct: 3 QQELIIRQAVKEDHEAIRHVLIKSYSQYEPQFTEEGWQNYSAALAAAVDNPNMELMLVAE 62 Query: 64 IDNRIVGSVLLFLSSEEAYGRPELGIRSPIIRLLAVSPSVRGRGIAVLLIREAARRSIGL 123 ++ ++VG++ +F SS +AY +PE+GI S I+R L V P VRG+GIA L+R++ + Sbjct: 63 LEGQVVGTLQMFRSSAQAYDKPEMGITSAIVRFLGVDPDVRGKGIAESLLRKSIELTQSW 122 Query: 124 GAATLNLHTSDMMASAVKLYERLGFQRAYETDIMNGD-TLVKGY 166 G L LHTSD M +A++LYER+GF+RA + + +N + T VK Y Sbjct: 123 GENVLYLHTSDKMQAAIRLYERMGFERALDKEFVNQNGTHVKSY 166 >A3ICS1.1 A3ICS1_9BACI Putative uncharacterized protein Length = 170 Score = 110 bits (275), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 64/166 (38%), Positives = 93/166 (56%), Gaps = 1/166 (0%) Query: 6 EILIRNAADSDRDAIAKVLLEAYGQYAAELPEP-FWAEYRRSILDSVHGTAPYARIVAEI 64 EI+I + + D +VL+E+YGQY + +P WA Y I SV +VA+ Sbjct: 5 EIVIEHLQEEDYANYLEVLVESYGQYEKDYKDPENWASYLNDIRASVGNPNAETILVAKR 64 Query: 65 DNRIVGSVLLFLSSEEAYGRPELGIRSPIIRLLAVSPSVRGRGIAVLLIREAARRSIGLG 124 + I+G + LF +E+AYG PEL I+S I+RLL V P RG+G+A L++E+ + Sbjct: 65 GDEILGGLQLFTDAEKAYGLPELNIQSTIVRLLGVHPKGRGQGVAKKLLQESFSFARKRQ 124 Query: 125 AATLNLHTSDMMASAVKLYERLGFQRAYETDIMNGDTLVKGYCLDL 170 L LH+ D+M +A+ LY LGF R + GD LVK + DL Sbjct: 125 DQALYLHSGDIMQAAINLYLSLGFVRDKSKEFYKGDILVKSFRYDL 170 >B1HWB4.1 B1HWB4_LYSSC Putative acetyltransferase Length = 170 Score = 107 bits (267), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 63/169 (37%), Positives = 92/169 (54%), Gaps = 1/169 (0%) Query: 3 NSKEILIRNAADSDRDAIAKVLLEAYGQYAAELPEP-FWAEYRRSILDSVHGTAPYARIV 61 + EI+I + + + KVL+E+YGQY + +P WA Y I SV ++ Sbjct: 2 TTAEIVIEHLQEEEYADYRKVLVESYGQYEKDYKDPEQWASYLNDIRASVGNPNAETILI 61 Query: 62 AEIDNRIVGSVLLFLSSEEAYGRPELGIRSPIIRLLAVSPSVRGRGIAVLLIREAARRSI 121 A + I+G + LF +E+AYG PEL I+S I+RLL V P RG+G+A L+ E+ + Sbjct: 62 ARRGDEILGGLQLFTDAEKAYGLPELNIQSTIVRLLGVHPKGRGQGVAKKLLHESFAFAR 121 Query: 122 GLGAATLNLHTSDMMASAVKLYERLGFQRAYETDIMNGDTLVKGYCLDL 170 L LH+ D+M +A+ LY LGF R + GD LVK + DL Sbjct: 122 KRQDQALYLHSGDIMQAAINLYLSLGFVRDESKEFYKGDILVKSFRYDL 170 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.320 0.136 0.385 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,067,016,742 Number of extensions: 41341286 Number of successful extensions: 109511 Number of sequences better than 1.0e-05: 34 Number of HSP's gapped: 109752 Number of HSP's successfully gapped: 34 Length of query: 194 Length of database: 3,060,696,203 Length adjustment: 128 Effective length of query: 66 Effective length of database: 1,854,806,283 Effective search space: 122417214678 Effective search space used: 122417214678 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 127 (53.5 bits)