BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0470.0029.p (161 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KHQ5.1 B3KHQ5_9BACI Putative uncharacterized protein 207 2e-52 B1D6E0.1 B1D6E0_9BACL Putative uncharacterized protein 194 2e-48 Q01XR5.1 Q01XR5_SOLUE Putative uncharacterized protein 75 2e-12 C1XPB5.1 C1XPB5_9DEIN Putative uncharacterized protein 73 1e-11 Q1IPN5.1 Q1IPN5_ACIBL Putative uncharacterized protein 69 1e-10 >B3KHQ5.1 B3KHQ5_9BACI Putative uncharacterized protein Length = 155 Score = 207 bits (528), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 100/149 (67%), Positives = 118/149 (79%) Query: 1 MSSVQIRDYLNTYDQLVQSLEGLSEEQLRWKAAPSNWSVTEVLAHLADHSIVVSFRIRDI 60 MS I ++NT+DQL+ ++ GLSE+QL+WK AP WSV EVL+HL DHSIV+SFRIRDI Sbjct: 1 MSKFPIEAFVNTHDQLLAAVAGLSEDQLQWKQAPHIWSVQEVLSHLVDHSIVISFRIRDI 60 Query: 61 LAGTEAQLPVFNQDAWVSGQHANGGHAADSLELFRSLLYYNSLLFNRLGDGEWEKSGINF 120 LAGT AQLP FNQDAWVSGQ++N G AAD LE FR+LL+YNSLL RL + K+GINF Sbjct: 61 LAGTTAQLPAFNQDAWVSGQYSNEGRAADILEAFRALLHYNSLLLRRLSAADAAKTGINF 120 Query: 121 KGEAVSIADIVRSFTGHVQTHLAQIERIK 149 KGE VS++DIV FT HVQ HL QIERIK Sbjct: 121 KGETVSVSDIVSGFTRHVQNHLGQIERIK 149 >B1D6E0.1 B1D6E0_9BACL Putative uncharacterized protein Length = 167 Score = 194 bits (494), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 91/149 (61%), Positives = 118/149 (79%) Query: 1 MSSVQIRDYLNTYDQLVQSLEGLSEEQLRWKAAPSNWSVTEVLAHLADHSIVVSFRIRDI 60 MS++ I+ YL+T+ QL Q++ G+ E QL+WK + WS+TEVL+HLADH+IVVSFRIRDI Sbjct: 1 MSAIDIQAYLDTHLQLTQAIAGVEEAQLKWKENEAKWSITEVLSHLADHNIVVSFRIRDI 60 Query: 61 LAGTEAQLPVFNQDAWVSGQHANGGHAADSLELFRSLLYYNSLLFNRLGDGEWEKSGINF 120 LA T+AQLP FNQD WVSGQH+N G+A+D L +F +LL YN LLF RL + + +K+GINF Sbjct: 61 LADTKAQLPAFNQDLWVSGQHSNDGNASDILNVFWALLQYNGLLFGRLSEQDLDKTGINF 120 Query: 121 KGEAVSIADIVRSFTGHVQTHLAQIERIK 149 KGE V + DI++ FT HVQ HL QI+RIK Sbjct: 121 KGETVRVRDIIQGFTKHVQHHLGQIDRIK 149 >Q01XR5.1 Q01XR5_SOLUE Putative uncharacterized protein Length = 164 Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 51/146 (34%), Positives = 70/146 (47%), Gaps = 6/146 (4%) Query: 7 RDYLNTYDQLVQSLE----GLSEEQLRWKAAPSNWSVTEVLAHLADHSIVVSFRIRDILA 62 RD L+ Q+L GLS E L AP WS +++ HLAD I FR+R LA Sbjct: 11 RDPLSVIAATAQALADRSAGLSTEALNRAPAPGKWSFRQIVCHLADTEIAFGFRLRQALA 70 Query: 63 GTEAQLPVFNQDAWVSGQHANGGHAADSLELFRSLLYYNSLLFNRLGDGEWEKSGINFKG 122 + F+QD W A AA L LF +L +N LL R+G+ E + + Sbjct: 71 EPNHVIQPFDQDRWAERYEAYDLPAA--LALFTTLRKWNLLLLQRVGEKELALPVSHPER 128 Query: 123 EAVSIADIVRSFTGHVQTHLAQIERI 148 A++ IV + GH HLAQ+E + Sbjct: 129 GAMTFRTIVETMAGHDLNHLAQLEVV 154 >C1XPB5.1 C1XPB5_9DEIN Putative uncharacterized protein Length = 161 Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 50/149 (33%), Positives = 75/149 (50%), Gaps = 4/149 (2%) Query: 7 RDYLNTYDQLVQSLEGLSEEQLRWKA-APSNWSVTEVLAHLADHSIVVSFRIRDILAGTE 65 RD L Q LE L K+ P W+ E++ HLAD + + FRIR LA Sbjct: 15 RDPLACLAATPQQLEALLPRLEPEKSYGPGKWTAREIVCHLADTELAMGFRIRQTLAVDN 74 Query: 66 AQLPVFNQDAWVSGQHANGGHAADSLELFRSLLYYNSLLFNRLGDGEWEKSGINFKGEA- 124 + F+Q+AW + G +LE FR+L +N L + LGD E E++ + + E Sbjct: 75 PTVQPFDQEAW--AKRYAGLPLPLALETFRALRAWNLALVSTLGDEELERTYYHPEREEW 132 Query: 125 VSIADIVRSFTGHVQTHLAQIERIKQDAV 153 S+ ++R GH HLAQ+E+I ++ V Sbjct: 133 ESLRMLLRFVAGHDLNHLAQLEQIAKETV 161 >Q1IPN5.1 Q1IPN5_ACIBL Putative uncharacterized protein Length = 167 Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 44/141 (31%), Positives = 68/141 (48%), Gaps = 6/141 (4%) Query: 11 NTYDQLVQSLEGLSEEQLRWKAAPSNWSVTEVLAHLADHSIVVSFRIRDILAGTEAQLPV 70 T +L + L EEQ+R + AP WS E+ HL++ +VV R+R ++ + Sbjct: 27 ETPGKLDRILSSFPEEQIRRRPAPGKWSPAEIAIHLSEVEMVVGVRVRLVIGTNGIAIQG 86 Query: 71 FNQDAWVSGQHANGGHA--ADSLELFRSLLYYNSLLFNRLGDGEWEKSGINFKGEAVSIA 128 F+QD+W + GH +LE FR+L N + L +WE+ G++ + + Sbjct: 87 FDQDSWAT----RYGHTDLDIALEAFRALRAANVAFYRSLSPEQWEQYGMHSERGKETAR 142 Query: 129 DIVRSFTGHVQTHLAQIERIK 149 IV GH HL QIE I Sbjct: 143 RIVELCAGHDINHLRQIEAIP 163 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.319 0.133 0.391 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 945,800,607 Number of extensions: 36023104 Number of successful extensions: 88574 Number of sequences better than 1.0e-05: 54 Number of HSP's gapped: 88598 Number of HSP's successfully gapped: 54 Length of query: 161 Length of database: 3,060,696,203 Length adjustment: 121 Effective length of query: 40 Effective length of database: 1,920,753,388 Effective search space: 76830135520 Effective search space used: 76830135520 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 126 (53.1 bits)