BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0470.0024.p (209 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B1D945.1 B1D945_9BACL Metal dependent phosphohydrolase 332 2e-89 A3I890.1 A3I890_9BACI HD domain protein 267 4e-70 B8DBM0.1 B8DBM0_LISMH HD domain protein 228 4e-58 C2C331.1 C2C331_LISGR HAD superfamily hydrolase 226 8e-58 Q71WT7.1 Q71WT7_LISMF HD domain protein 226 9e-58 >B1D945.1 B1D945_9BACL Metal dependent phosphohydrolase Length = 209 Score = 332 bits (850), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 157/208 (75%), Positives = 180/208 (86%) Query: 1 MGIHKYFRSLNELERIIRCPGKFKFEEHSVAAHSWKVVQYAKTLADIEEQNGAVIDWKKL 60 MGIH YF+SL +LERIIRCPGKFKF+ HSVA HSWKVVQYAKTLADIEE NG +DWKKL Sbjct: 1 MGIHTYFQSLTDLERIIRCPGKFKFQAHSVAEHSWKVVQYAKTLADIEEMNGVAVDWKKL 60 Query: 61 YEITSSHDYGEIFIGDIKTPVKHSSLQLRSLIQQVEEGMIDNFIKEHIPEEFKSIFYHQL 120 YEITSSHDYGEIFIGDIKTPVKH S++LRS++ QVEEGM+ +FI +HIPEEFK F QL Sbjct: 61 YEITSSHDYGEIFIGDIKTPVKHYSMELRSMLLQVEEGMVAHFIDDHIPEEFKPTFRRQL 120 Query: 121 REGKDESLEGLILEVADKMDQVYEAFAELQRGNTEKEFVVMYRNALIKIKNIELKCVEYF 180 REGKD+S+EG ILEVADK+DQ+YEAF ELQ GNTEKEF+VMYR+ALIKIK I+L CV+YF Sbjct: 121 REGKDQSVEGQILEVADKLDQIYEAFIELQLGNTEKEFIVMYRSALIKIKEIKLHCVDYF 180 Query: 181 LTEILPDMVNEETISSIDIRQITEEALA 208 L ILPD+V + S IDI +IT+EALA Sbjct: 181 LAHILPDLVAQGVKSPIDIEKITKEALA 208 >A3I890.1 A3I890_9BACI HD domain protein Length = 212 Score = 267 bits (683), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 128/209 (61%), Positives = 164/209 (78%), Gaps = 3/209 (1%) Query: 1 MGIHKYFRSLNELERIIRCPGKFKFEEHSVAAHSWKVVQYAKTLADIEEQNGAVIDWKKL 60 +GIH++F SLN+LERIIRCPG+FKFEEH+VAAHSWKV QYA A +EE NG IDWK L Sbjct: 4 IGIHQFFTSLNDLERIIRCPGRFKFEEHNVAAHSWKVSQYAMFFATLEEMNGVQIDWKSL 63 Query: 61 YEITSSHDYGEIFIGDIKTPVKHSSLQLRSLIQQVEEGMIDNFIKEHIPEEFKSIFYHQL 120 YE T +HD+ E+FIGDIKTPVKH+S +L+ ++ VEE M++ FI IPEEF++IF+ ++ Sbjct: 64 YEKTINHDFAEVFIGDIKTPVKHASPELKQMLAHVEEKMMEKFISNEIPEEFQAIFFERM 123 Query: 121 REGKDESLEGLILEVADKMDQVYEAFAELQRGNTEKEFVVMYRNALIKIKNIELKC-VEY 179 +EGKD ++EG +LE ADK+DQ YEAFAEL+RGNT+KEFV MY+NAL K+ I L+ V+Y Sbjct: 124 KEGKDSTIEGRLLEFADKLDQFYEAFAELKRGNTDKEFVYMYQNALSKLLAIPLEATVQY 183 Query: 180 FLTEILPDMVNEETISSIDIRQITEEALA 208 F TEIL D V E+T IDI+ +T E L Sbjct: 184 FRTEILKDAVQEKT--HIDIQALTNEVLT 210 >B8DBM0.1 B8DBM0_LISMH HD domain protein Length = 215 Score = 228 bits (580), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 106/206 (51%), Positives = 150/206 (72%), Gaps = 1/206 (0%) Query: 1 MGIHKYFRSLNELERIIRCPGKFKFEEHSVAAHSWKVVQYAKTLADIEEQNGAVIDWKKL 60 MGIH+YF+SL++LE I RCPGKFK++EHSVA HS+KV A+ +EE+ G ++W+ L Sbjct: 1 MGIHQYFQSLSDLENIYRCPGKFKYQEHSVAEHSYKVTSIAQFFGAVEEEAGNEVNWRAL 60 Query: 61 YEITSSHDYGEIFIGDIKTPVKHSSLQLRSLIQQVEEGMIDNFIKEHIPEEFKSIFYHQL 120 YE +HDY E+FIGDIKTPVK+++ +LR ++ +VEE M NFI+ IPE ++ I++H L Sbjct: 61 YEKALNHDYSELFIGDIKTPVKYATTELREMLSEVEESMTKNFIEREIPETYQPIYHHLL 120 Query: 121 REGKDESLEGLILEVADKMDQVYEAFAELQRGNTEKEFVVMYRNALIKIKNI-ELKCVEY 179 +EGKD +LEG IL ++DK+D +YE+F E+Q+GN E FV +Y AL I E+ V+Y Sbjct: 121 KEGKDSTLEGKILAISDKVDLLYESFGEIQKGNPENIFVEIYSEALATIYQYREMASVKY 180 Query: 180 FLTEILPDMVNEETISSIDIRQITEE 205 FL EILPDM+ E+ I ++ Q+T E Sbjct: 181 FLKEILPDMLAEKGIEKTELPQLTTE 206 >C2C331.1 C2C331_LISGR HAD superfamily hydrolase Length = 216 Score = 226 bits (576), Expect = 8e-58, Method: Compositional matrix adjust. Identities = 107/209 (51%), Positives = 150/209 (71%), Gaps = 1/209 (0%) Query: 1 MGIHKYFRSLNELERIIRCPGKFKFEEHSVAAHSWKVVQYAKTLADIEEQNGAVIDWKKL 60 MGIH+YF+SL++LE I RCPGKFK++EHSVA HS+KV A+ L +EEQ G IDW+ L Sbjct: 1 MGIHQYFQSLSDLENIYRCPGKFKYQEHSVAEHSYKVTSIAQFLGLVEEQAGNEIDWRSL 60 Query: 61 YEITSSHDYGEIFIGDIKTPVKHSSLQLRSLIQQVEEGMIDNFIKEHIPEEFKSIFYHQL 120 YE +HDY E+FIGDIKTPVK+++ +LR ++ +VEE M NFI+ IPE F+ + + L Sbjct: 61 YEKALNHDYSELFIGDIKTPVKYATPELREMLSEVEESMTHNFIEREIPERFQKAYRYFL 120 Query: 121 REGKDESLEGLILEVADKMDQVYEAFAELQRGNTEKEFVVMYRNALIKIKNI-ELKCVEY 179 +EGKD+++EG IL VADK+D +YE+F E+Q+GN E F+ +Y AL I E+ +Y Sbjct: 121 KEGKDQTIEGKILAVADKVDLLYESFGEIQKGNPENVFIEIYTEALATIYQFREMASAQY 180 Query: 180 FLTEILPDMVNEETISSIDIRQITEEALA 208 FL EILPDM+ E+ I ++ Q+T ++ Sbjct: 181 FLDEILPDMLAEKGIEKTELPQLTNTVMS 209 >Q71WT7.1 Q71WT7_LISMF HD domain protein Length = 215 Score = 226 bits (576), Expect = 9e-58, Method: Compositional matrix adjust. Identities = 106/206 (51%), Positives = 149/206 (72%), Gaps = 1/206 (0%) Query: 1 MGIHKYFRSLNELERIIRCPGKFKFEEHSVAAHSWKVVQYAKTLADIEEQNGAVIDWKKL 60 MGIH+YF+SL++LE I RCPGKFK++EHSVA HS+KV A+ +EE+ G ++W+ L Sbjct: 1 MGIHQYFQSLSDLENIYRCPGKFKYQEHSVAEHSYKVTSIAQFFGAVEEEAGNEVNWRAL 60 Query: 61 YEITSSHDYGEIFIGDIKTPVKHSSLQLRSLIQQVEEGMIDNFIKEHIPEEFKSIFYHQL 120 YE +HDY E+FIGDIKTPVK+++ +LR ++ +VEE M NFI+ IPE ++ I+ H L Sbjct: 61 YEKALNHDYSELFIGDIKTPVKYATTELREMLSEVEESMTKNFIEREIPETYQPIYRHLL 120 Query: 121 REGKDESLEGLILEVADKMDQVYEAFAELQRGNTEKEFVVMYRNALIKIKNI-ELKCVEY 179 +EGKD +LEG IL ++DK+D +YE+F E+Q+GN E FV +Y AL I E+ V+Y Sbjct: 121 KEGKDSTLEGKILAISDKVDLLYESFGEIQKGNPENIFVEIYSEALATIYQYREMASVKY 180 Query: 180 FLTEILPDMVNEETISSIDIRQITEE 205 FL EILPDM+ E+ I ++ Q+T E Sbjct: 181 FLKEILPDMLAEKGIEKTELPQLTTE 206 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.319 0.136 0.384 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,175,142,081 Number of extensions: 46044604 Number of successful extensions: 131233 Number of sequences better than 1.0e-05: 236 Number of HSP's gapped: 131294 Number of HSP's successfully gapped: 236 Length of query: 209 Length of database: 3,060,696,203 Length adjustment: 130 Effective length of query: 79 Effective length of database: 1,835,964,253 Effective search space: 145041175987 Effective search space used: 145041175987 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 128 (53.9 bits)