BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0470.0013.p (300 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value A0Z216.1 A0Z216_9GAMM Putative uncharacterized protein 209 2e-52 B7RV31.1 B7RV31_9GAMM Putative acetoacetate decarboxylase EC=4.1... 197 1e-48 C1R8I8.1 C1R8I8_9ACTO Acetoacetate decarboxylase 107 1e-21 B7RYX3.1 B7RYX3_9GAMM Putative acetoacetate decarboxylase EC=4.1... 106 3e-21 Q829H0.1 Q829H0_STRAW Putative uncharacterized protein 87 3e-15 >A0Z216.1 A0Z216_9GAMM Putative uncharacterized protein Length = 298 Score = 209 bits (533), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 110/268 (41%), Positives = 156/268 (58%), Gaps = 11/268 (4%) Query: 37 FIKDVNEIVKRTTTPTTFYNAETLTVYWETSXXXXXXXXXXXXXXXXXXXVQAFVADYPR 96 F+K +++ FYNAE L ++WET+ V AF+A YP Sbjct: 31 FVKSYKDLMAGGRPTADFYNAEMLNLFWETTPEAIATLLPPPLNPASKPVVAAFIAYYPE 90 Query: 97 TSFCEPYREAAIFVLAQYNGQLGSYCLSMPINDDIAMGLGREIYGFPKKMANISLSKEDQ 156 T+F PY E++I + A Y G+ G YCLSMP++DD+AM GRE +G+PKKMAN S S+E Sbjct: 91 TNFSVPYHESSILIRASYKGEEGFYCLSMPVDDDMAMAGGRETWGYPKKMANFSFSREGD 150 Query: 157 RISGSVSRRGIEFFRVKAALSGKMNAGDGQQILDEYYGDGL--------PVFNIKYSKSA 208 ++G R GI+F +VKA L+GK+N +G LDE G G+ V+ K+S S Sbjct: 151 TVTGYTERHGIKFMQVKAKLTGKVN--NGNAALDEILGLGVKPDGEFSDKVYLFKHSHSP 208 Query: 209 DGNG-FDVPPLLIGQNTSMDISVLKAAEVEVTLSDSPHDPWAELEVVKLLGGVYTVSNTI 267 G FD PPLL+ +T AE E+ L+ S +DPW E+ V ++LGG YTV + Sbjct: 209 VKTGIFDYPPLLVEGHTRFRPKTFTWAETEIKLTPSEYDPWQEVPVERMLGGFYTVGDNS 268 Query: 268 LLRGSVLAKVNPVNFLPYSYLRWDWYEN 295 +L G VL KVN + FLPYS+L++++ +N Sbjct: 269 MLHGRVLQKVNELEFLPYSFLKYEFEQN 296 >B7RV31.1 B7RV31_9GAMM Putative acetoacetate decarboxylase EC=4.1.1.4 Length = 246 Score = 197 bits (500), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 103/245 (42%), Positives = 145/245 (59%), Gaps = 11/245 (4%) Query: 60 LTVYWETSXXXXXXXXXXXXXXXXXXXVQAFVADYPRTSFCEPYREAAIFVLAQYNGQLG 119 L ++WET+ V AF+A YP T+F PY E++I + A Y G+ G Sbjct: 2 LNLFWETTPEAIATLVPPPLKPASKPVVAAFIAYYPETNFSVPYHESSILIRASYKGEEG 61 Query: 120 SYCLSMPINDDIAMGLGREIYGFPKKMANISLSKEDQRISGSVSRRGIEFFRVKAALSGK 179 YCLSMP++DD+AM GRE +G+PKKMAN S S+E ++G R GI+F +VKA L+GK Sbjct: 62 FYCLSMPVDDDMAMAGGRETWGYPKKMANFSFSREGDTVTGYTERHGIKFMQVKAKLTGK 121 Query: 180 MNAGDGQQILDEYYGDGL--------PVFNIKYSKSADGNG-FDVPPLLIGQNTSMDISV 230 +N +G LDE G G+ V+ K+S S G FD PPLL+ +T Sbjct: 122 VN--NGNAALDEILGLGVKPDGEFSDKVYLFKHSHSPVKTGIFDYPPLLVEGHTRFRPKT 179 Query: 231 LKAAEVEVTLSDSPHDPWAELEVVKLLGGVYTVSNTILLRGSVLAKVNPVNFLPYSYLRW 290 AE E+ L+ S +DPW E+ V ++LGG YTV + +L G VL KVN + FLPYS+L++ Sbjct: 180 FTWAETEIELTPSEYDPWQEVPVERMLGGFYTVGDNSMLHGRVLQKVNELEFLPYSFLKY 239 Query: 291 DWYEN 295 ++ +N Sbjct: 240 EFDQN 244 >C1R8I8.1 C1R8I8_9ACTO Acetoacetate decarboxylase Length = 280 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 62/190 (32%), Positives = 104/190 (54%), Gaps = 10/190 (5%) Query: 102 PYREAAIFVLAQYNGQLGSYCLSMPINDDIAMGLGREIYGFPKKMANISLSKEDQRISGS 161 P AAI V + G+ G Y L MP+ + ++ GRE++G PKK+A + + ++ ++++G+ Sbjct: 80 PLGAAAISVACAHGGEEGWYSLVMPMTTERSLIGGREVFGEPKKLAEVVVDRDGEQVAGT 139 Query: 162 VSRRGIEFFRVKAALSGKMNAGDGQQILDEYYGDGLPVFNIKYSKSADGNGFDVPPLLIG 221 V+R G+ F ++ ++G + +D Y +K+ + DG+GFD PLL+ Sbjct: 140 VTRHGVTFAEIRGRIAGALEPPAPYVKVDWY---------LKFLPAVDGSGFDADPLLVR 190 Query: 222 QNTSMDISVLKAAEVEVTLSDSPHDPWAELEVVKLLGGVYTVSNTILLRGSVLAKVNPVN 281 + L A E EV L DS DP A+L V++L+ Y T RG V+A+++P Sbjct: 191 CLRTEKTRSLNAVEGEVILRDSDLDPIADLPVLRLVEITYG-EKTSDQRGEVVARLDPQE 249 Query: 282 FLPYSYLRWD 291 LPY + R+D Sbjct: 250 ILPYVHQRYD 259 >B7RYX3.1 B7RYX3_9GAMM Putative acetoacetate decarboxylase EC=4.1.1.4 Length = 144 Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 51/119 (42%), Positives = 72/119 (60%) Query: 36 SFIKDVNEIVKRTTTPTTFYNAETLTVYWETSXXXXXXXXXXXXXXXXXXXVQAFVADYP 95 SF+K EI+ + F++AE LT+ WET+ V AFVA+YP Sbjct: 2 SFVKTYEEIMGNSPASGDFHDAEMLTLVWETTPEAIEKLLPPPLKPASRPVVLAFVANYP 61 Query: 96 RTSFCEPYREAAIFVLAQYNGQLGSYCLSMPINDDIAMGLGREIYGFPKKMANISLSKE 154 T+F PY E+A+ + A + G G YCLSMP+ +D+AM GREI+G+PKK+ANI+L +E Sbjct: 62 STNFSLPYLESALLIRASFEGTEGFYCLSMPVTNDMAMAGGREIWGYPKKLANIALQRE 120 >Q829H0.1 Q829H0_STRAW Putative uncharacterized protein Length = 265 Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 54/182 (29%), Positives = 96/182 (52%), Gaps = 10/182 (5%) Query: 110 VLAQYNGQLGSYCLSMPINDDIAMGLGREIYGFPKKMANISLSKEDQRISGSVSRRGIEF 169 V A ++G G Y L MP+ + A+ GRE++G PKK+ +++ ++ + +++R GI F Sbjct: 80 VAAAHDGVEGWYPLVMPMTHERALIGGREVFGEPKKLGEVTVERDGLVVRAALARHGIAF 139 Query: 170 FRVKAALSGKMNAGDGQQILDEYYGDGLPVFNIKYSKSADGNGFDVPPLLIGQNTSMDIS 229 V+ A+SG + + + D Y+ K+ S DG GFD P+L+ + + Sbjct: 140 VEVRGAVSGDLPLPEPVRKTDFYF---------KFLPSVDGPGFDTAPVLVHCLRNEKVR 190 Query: 230 VLKAAEVEVTLSDSPHDPWAELEVVKLLGGVYTVSNTILLRGSVLAKVNPVNFLPYSYLR 289 L+ +V L +S +DP A+L V +L+ + T +G V+ +V+ LPY + R Sbjct: 191 RLERITGDVVLRESMYDPVADLPVRRLV-EITIGEKTTDQKGKVVEQVSAQALLPYIHQR 249 Query: 290 WD 291 +D Sbjct: 250 YD 251 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.319 0.137 0.410 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,621,324,053 Number of extensions: 60456188 Number of successful extensions: 119356 Number of sequences better than 1.0e-05: 25 Number of HSP's gapped: 119360 Number of HSP's successfully gapped: 25 Length of query: 300 Length of database: 3,060,696,203 Length adjustment: 135 Effective length of query: 165 Effective length of database: 1,788,859,178 Effective search space: 295161764370 Effective search space used: 295161764370 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 131 (55.1 bits)