BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0470.0007.p (173 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KFG9.1 B3KFG9_9BACI Extracellular solute-binding protein family 1 242 9e-63 B1D8F2.1 B1D8F2_9BACL Extracellular solute-binding protein family 1 235 1e-60 B3KCT0.1 B3KCT0_9BACI Extracellular solute-binding protein family 1 130 4e-29 B1D8I4.1 B1D8I4_9BACL Extracellular solute-binding protein family 1 129 7e-29 B1D6H3.1 B1D6H3_9BACL Extracellular solute-binding protein family 1 122 2e-26 >B3KFG9.1 B3KFG9_9BACI Extracellular solute-binding protein family 1 Length = 533 Score = 242 bits (617), Expect = 9e-63, Method: Compositional matrix adjust. Identities = 112/134 (83%), Positives = 123/134 (91%) Query: 1 VEVFDRGVQGQPDLNNNMWTKYVNEKFGKPNNAIVEYVSVPRSQEIDKLNVLMAAGEAPD 60 VEVFDRG+QGQPDLNNN WTKYVNEKFGKPNNAIV++V VPRSQE+DKLNVLMAA EAPD Sbjct: 55 VEVFDRGIQGQPDLNNNTWTKYVNEKFGKPNNAIVKFVPVPRSQEVDKLNVLMAANEAPD 114 Query: 61 ISFTYDGTTVTRYAKSKGIYTLDELLEEHGQQLKSYLGEKVLSYGKYEGKQVSIPGKRTL 120 ISFTYDG TVTR+AKS G+YTLDELLE+HGQQLKSYLGE+VLSYGKYEGKQ+SIPGKRTL Sbjct: 115 ISFTYDGNTVTRFAKSGGLYTLDELLEKHGQQLKSYLGEQVLSYGKYEGKQISIPGKRTL 174 Query: 121 LAWNGMXXXXGWIS 134 +AWNGM W+ Sbjct: 175 IAWNGMFIRKDWLD 188 >B1D8F2.1 B1D8F2_9BACL Extracellular solute-binding protein family 1 Length = 537 Score = 235 bits (600), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 109/134 (81%), Positives = 122/134 (91%) Query: 1 VEVFDRGVQGQPDLNNNMWTKYVNEKFGKPNNAIVEYVSVPRSQEIDKLNVLMAAGEAPD 60 VEVFDRG+QGQPDL+NN WTKYVNEKFGKPNNAIV+YV+VPRSQE+DKLNVLMAA EAPD Sbjct: 59 VEVFDRGIQGQPDLSNNTWTKYVNEKFGKPNNAIVKYVTVPRSQEVDKLNVLMAANEAPD 118 Query: 61 ISFTYDGTTVTRYAKSKGIYTLDELLEEHGQQLKSYLGEKVLSYGKYEGKQVSIPGKRTL 120 ISFTYDGTTVTR+AK+KG+YTLDELLE+ GQQLK+YLG+ VL YGKYEGKQVSIP KRTL Sbjct: 119 ISFTYDGTTVTRFAKNKGLYTLDELLEKDGQQLKAYLGDTVLDYGKYEGKQVSIPAKRTL 178 Query: 121 LAWNGMXXXXGWIS 134 LAWNG+ W+ Sbjct: 179 LAWNGLFIRKDWLD 192 >B3KCT0.1 B3KCT0_9BACI Extracellular solute-binding protein family 1 Length = 541 Score = 130 bits (327), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 64/135 (47%), Positives = 86/135 (63%), Gaps = 2/135 (1%) Query: 1 VEVFDRGVQGQP-DLNNNMWTKYVNEKFGKPNNAIVEYVSVPRSQEIDKLNVLMAAG-EA 58 VE+FDRG +P + ++ T+Y+ + FG PNN +E+V VPRS+EI KLNVLMA+G Sbjct: 57 VEIFDRGNTPKPYTITDSYLTRYIQDNFGNPNNIKMEFVPVPRSEEIKKLNVLMASGGNV 116 Query: 59 PDISFTYDGTTVTRYAKSKGIYTLDELLEEHGQQLKSYLGEKVLSYGKYEGKQVSIPGKR 118 PDI FTYD T RYA+ G+ L +L+ EHG LK +L E +SYG+Y GKQ ++PGKR Sbjct: 117 PDIVFTYDTPTFNRYAEQGGLTELTDLINEHGPNLKEFLDEDAMSYGQYMGKQFAVPGKR 176 Query: 119 TLLAWNGMXXXXGWI 133 L W+ Sbjct: 177 AFLGKYSSFIRADWL 191 >B1D8I4.1 B1D8I4_9BACL Extracellular solute-binding protein family 1 Length = 538 Score = 129 bits (325), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 64/124 (51%), Positives = 86/124 (69%), Gaps = 2/124 (1%) Query: 1 VEVFDRGVQ-GQPDLNNNMWTKYVNEKFGKPNNAIVEYVSVPRSQEIDKLNVLMAAG-EA 58 VEVFDRG + NN TK+V +KFG PNN V++V +PRS+E+ KLNVLMA+G + Sbjct: 56 VEVFDRGNSPAGSTITNNYLTKFVQDKFGTPNNINVQFVPIPRSEEVQKLNVLMASGSDV 115 Query: 59 PDISFTYDGTTVTRYAKSKGIYTLDELLEEHGQQLKSYLGEKVLSYGKYEGKQVSIPGKR 118 PDI FTYD T RYA+ G+ L ELL+++G LK +LG++ L+YG+Y GKQ + P KR Sbjct: 116 PDIVFTYDSGTFYRYAQQGGLTDLGELLDQYGPNLKKFLGDETLAYGQYNGKQFAFPAKR 175 Query: 119 TLLA 122 + L Sbjct: 176 SHLG 179 >B1D6H3.1 B1D6H3_9BACL Extracellular solute-binding protein family 1 Length = 539 Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 60/122 (49%), Positives = 82/122 (67%), Gaps = 3/122 (2%) Query: 1 VEVFDRG--VQGQPDLNNNMWTKYVNEKFGKPNNAIVEYVSVPRSQEIDKLNVLMAAGEA 58 +EVFDRG G + +N WT+++ + FG PNN +E+V VPR+QE+DKLNVLMA G+A Sbjct: 56 IEVFDRGNAPAGAGPVTDNFWTQWIQKNFGDPNNIKLEFVPVPRNQEVDKLNVLMATGDA 115 Query: 59 PDISFTYDGTTVTRYAKSKGIYTLDELLEEHGQQLKSYLGEKVLSYGKYEGKQVSIPGKR 118 PD+ FTYD T+ Y K G+ L L+ + LK +LG+ VL+YG + GKQ +IP KR Sbjct: 116 PDLVFTYDMNTIYNYVKDGGLTDLTSLI-GNAPNLKKFLGDDVLNYGVFNGKQYTIPAKR 174 Query: 119 TL 120 L Sbjct: 175 PL 176 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.318 0.136 0.418 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,088,124,490 Number of extensions: 41908990 Number of successful extensions: 97153 Number of sequences better than 1.0e-05: 14 Number of HSP's gapped: 97205 Number of HSP's successfully gapped: 14 Length of query: 173 Length of database: 3,060,696,203 Length adjustment: 126 Effective length of query: 47 Effective length of database: 1,873,648,313 Effective search space: 88061470711 Effective search space used: 88061470711 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 126 (53.1 bits)