BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0470.0001.p (1026 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KFH2.1 B3KFH2_9BACI Alpha-N-arabinofuranosidase EC=3.2.1.55 1630 0.0 B1DF63.1 B1DF63_9BACL Alpha-N-arabinofuranosidase EC=3.2.1.55 1469 0.0 B3KC40.1 B3KC40_9BACI Alpha-N-arabinofuranosidase EC=3.2.1.55 465 e-128 B1D8I7.1 B1D8I7_9BACL Alpha-N-arabinofuranosidase EC=3.2.1.55 448 e-123 B1DF64.1 B1DF64_9BACL Ig domain protein group 2 domain protein 350 7e-94 >B3KFH2.1 B3KFH2_9BACI Alpha-N-arabinofuranosidase EC=3.2.1.55 Length = 1040 Score = 1630 bits (4220), Expect = 0.0, Method: Compositional matrix adjust. Identities = 801/1028 (77%), Positives = 885/1028 (86%), Gaps = 6/1028 (0%) Query: 3 KKRFRYXXXXXXXXXXXPQWSGPAVAAEPMPDTPGSAPLWEGKNVADFYNVIMQVGADPW 62 +KRFRY PQW+G A+AA PD A EGK+++DFYNVIMQ GADPW Sbjct: 10 RKRFRYLLFCLAVLLMLPQWNGAAMAAGVPPDRADLASRQEGKDMSDFYNVIMQTGADPW 69 Query: 63 VYKHTDGFYYNVFVNASGIMVRRAKTITGIEAGERSLAWTPVNGTMYSSNVWAPEMHYVQ 122 VYKHTDG+YYNVFVNASGIM+RRAKTITGI+AGERSLAWTPV GTMYSSNVWAPEMHY++ Sbjct: 70 VYKHTDGYYYNVFVNASGIMIRRAKTITGIDAGERSLAWTPVKGTMYSSNVWAPEMHYLR 129 Query: 123 DTDGKFKWYIYFAADNGANANHRMYVLENANENPMTGTWAFKGKITDSTDRWAIDGTVLT 182 D DG+FKWYIYFAADNG NANHRMYVLENA++NPMTGTW FKGKITDSTDRWAIDGTVLT Sbjct: 130 DNDGQFKWYIYFAADNGTNANHRMYVLENASDNPMTGTWEFKGKITDSTDRWAIDGTVLT 189 Query: 183 VNGQHYFIWSGWEETDGSFQNLYIAKMSDPRTISSERVLISTPDHDWETSPGKINEGPQV 242 VN HYFIWSGWEE DGSFQNLYIAK+SDPRTISSERVLISTP++DWETSPG+INEGP+V Sbjct: 190 VNEDHYFIWSGWEENDGSFQNLYIAKLSDPRTISSERVLISTPEYDWETSPGRINEGPEV 249 Query: 243 TIKGDTINLVYSANGSWTDSYCLGLITAKIGDDLMNPGSWVKQAQPIFSSANGVYGPGHH 302 T+KGDTINL+YSANGSWTDSY LGLITAKI DDLMNPGSWVK+ +PIFSSANGVYGPGHH Sbjct: 250 TVKGDTINLIYSANGSWTDSYSLGLITAKISDDLMNPGSWVKRDKPIFSSANGVYGPGHH 309 Query: 303 SIVASPDGAEDWIIYHAARWPGSGWTRKVHAQKFTWNEDNTPNLGEPADPNKPVAKPSGE 362 SIV+SPDGAE+WIIYHAARWPGSGWTRKV+AQKFTW +D TPNLGEP DPN P+A PSGE Sbjct: 310 SIVSSPDGAENWIIYHAARWPGSGWTRKVYAQKFTWKDDMTPNLGEPVDPNIPIAIPSGE 369 Query: 363 PVRQRYEAEEALLVKDPNGETFPAVRRESSASGGMKIANINNANDYAQFTVNVPEAGFYM 422 P+R+RYEAE ALLVKDP GET PAVRRES+ASGGMK+A I NANDYAQFTVNV EAGFY Sbjct: 370 PMRKRYEAEHALLVKDPIGETSPAVRRESTASGGMKVARIKNANDYAQFTVNVQEAGFYN 429 Query: 423 MSVR------NANGSPNAAEASHILSVNGSSGANLNIVYSGPNRWGASTAKVYLKEGDNI 476 +SVR NANGSPNAA+ASHILSVNGSSGA LNIVYSGPNRWGA TAKV+LK GDNI Sbjct: 430 LSVRNANGSPNANGSPNAADASHILSVNGSSGAKLNIVYSGPNRWGACTAKVFLKGGDNI 489 Query: 477 LRFWKGNNLAEIDSMDIFKLDASEILFESPGYTLGLGETRNLPLXXXXXXXXXXXXXXXF 536 +RF KG+NLAEIDSMD+FKLD SEILFE PG+TLGL ETR+LPL Sbjct: 490 IRFSKGSNLAEIDSMDLFKLDTSEILFEFPGFTLGLNETRSLPLYTVTGATYTAIDTGAT 549 Query: 537 FSSSNPKVAVIDGGTQVKAVGAGSTTITATYNGKMTTANVTVIAEPESVQSVVMSGLAGI 596 FSSS+ KVA+ID G Q++AVGAGSTTITATYNGK TTA VTV+AEP SVQS+ MSGL + Sbjct: 550 FSSSDTKVAIIDEGDQIQAVGAGSTTITATYNGKTTTAAVTVVAEPRSVQSLDMSGLDSV 609 Query: 597 LTSGQTSQPLQVTARYNNYEVQNVTADAQYTSSNPGVARIDSNSATRSVYAVKPGTTLIT 656 LTSGQ S PLQVTARYNNYE++NVTADAQYTSS+PGVARID+ S T SVYA KPGT LIT Sbjct: 610 LTSGQRSLPLQVTARYNNYEMKNVTADAQYTSSDPGVARIDTVSVTPSVYADKPGTALIT 669 Query: 657 GEYNGKKAAFHLTVIAASDAVQVVSRVKTPSGVAPKPPGVVDVVYNSKSKKAKIVSWELA 716 EYNG K A HLTVI ASDAVQVVS ++TPSGV P P VVDVVYNS+S A++VSW+ Sbjct: 670 AEYNGSKTAIHLTVIKASDAVQVVSELRTPSGVTPDSPSVVDVVYNSESMTAEVVSWKPE 729 Query: 717 GLDFSSLGTVQVPVTLKLGGRNISSAITVEVIPGWGLDDIVNQLRNQLANFSYPLGDGLG 776 G+DFSSLGTVQVPV LK+ GR+I S ++VE++ GWGLDDIV+QLRN+LANFSYPLG GLG Sbjct: 730 GMDFSSLGTVQVPVILKVDGRDIPSTVSVEIVAGWGLDDIVDQLRNRLANFSYPLGTGLG 789 Query: 777 NYNQSKYDAFVAEVDKAEKMAGNAELSKEQFERELDKXXXXXXXXXXXXNNIQDGVLYNA 836 NY+QSKYDAFVAEVDKAE+MA N +LSKEQF+ +LD N +QDGV+YNA Sbjct: 790 NYSQSKYDAFVAEVDKAEEMASNPDLSKEQFDGQLDNLAQAEEALLASLNLVQDGVVYNA 849 Query: 837 YRDFSGDTAGKYPYGIITEGLTNGASATVQEENGNKFLRLTTTAASGKANLFLPYTGEVK 896 YRDFSGDT GKYPYGI TE LTNGA+ATV+EE+GN FLRLTTTA SGKANLFLPYTGEVK Sbjct: 850 YRDFSGDTVGKYPYGITTEDLTNGATATVKEEDGNNFLRLTTTATSGKANLFLPYTGEVK 909 Query: 897 AEADQRIVIEYRARLNSSFQYANGAMIRNDSGTGNYSMVTAFDTGKIIVQDGGTKKAVLN 956 A ADQRIVIEYRARLNSSF YANGAM+RNDSGTGNYSMVTAFDTGK IVQ+GG+KKAV N Sbjct: 910 AGADQRIVIEYRARLNSSFPYANGAMMRNDSGTGNYSMVTAFDTGKFIVQNGGSKKAVKN 969 Query: 957 VANNIWYKVKIVANWDAKTYTVYIDDVPVAIDYKFRHTGGDKLTGQLFGVDGYANASIDF 1016 V+ N WYK+K+VANWD KTYTVY+DDVPVA DY FRHTGGDKL GQ FG+DGYANASIDF Sbjct: 970 VSYNTWYKIKMVANWDNKTYTVYLDDVPVATDYNFRHTGGDKLIGQRFGIDGYANASIDF 1029 Query: 1017 DDFKAMVI 1024 DDFKAMVI Sbjct: 1030 DDFKAMVI 1037 >B1DF63.1 B1DF63_9BACL Alpha-N-arabinofuranosidase EC=3.2.1.55 Length = 1489 Score = 1469 bits (3803), Expect = 0.0, Method: Compositional matrix adjust. Identities = 722/1030 (70%), Positives = 841/1030 (81%), Gaps = 13/1030 (1%) Query: 1 MVKKRFRYXXXXXXXXXXXPQWSGPAVAAEPMPDTPGS---APLWEGKNVADFYNVIMQV 57 M+ KRFRY PQWSG A AAE PD S + G V+DFYNVIMQV Sbjct: 1 MLTKRFRYLLLCLAVLLMLPQWSGAAAAAEQTPDQTDSISTSAATGGTEVSDFYNVIMQV 60 Query: 58 GADPWVYKHTDGFYYNVFVNASGIMVRRAKTITGIEAGERSLAWTPVNGTMYSSNVWAPE 117 GADPWVYKHTDG+YYNVFVNASGIM+RR+ TITGI++GERSLAWTPV GTMYSS+VWAPE Sbjct: 61 GADPWVYKHTDGYYYNVFVNASGIMIRRSTTITGIDSGERSLAWTPVKGTMYSSDVWAPE 120 Query: 118 MHYVQDTDGKFKWYIYFAADNGANANHRMYVLENANENPMTGTWAFKGKITDSTDRWAID 177 MHY++DTDGK+KWYIYFAAD+G NANHRMYVLENA++NPMTGTW FKGKITDSTDRWAID Sbjct: 121 MHYLKDTDGKYKWYIYFAADDGTNANHRMYVLENASDNPMTGTWEFKGKITDSTDRWAID 180 Query: 178 GTVLTVNGQHYFIWSGWEETDGSFQNLYIAKMSDPRTISSERVLISTPDHDWETSPGKIN 237 GTV+TVN +HYFIWSGWE+TDGSFQNLY+A+MSDPRTISS RVLISTPDHDWETSPG+IN Sbjct: 181 GTVMTVNDRHYFIWSGWEDTDGSFQNLYMAEMSDPRTISSNRVLISTPDHDWETSPGRIN 240 Query: 238 EGPQVTIKGDTINLVYSANGSWTDSYCLGLITAKIGDDLMNPGSWVKQAQPIFSSANGVY 297 EGP+VTI+G+TINLVYSANGSWTDSYCLGLITA+IGDDLMNP SWVKQ +PIFSSANGVY Sbjct: 241 EGPEVTIRGNTINLVYSANGSWTDSYCLGLITAQIGDDLMNPSSWVKQDKPIFSSANGVY 300 Query: 298 GPGHHSIVASPDGAEDWIIYHAARWPGSGWTRKVHAQKFTWNEDNTPNLGEPADPNKPVA 357 GPGHHS+ SPDG+EDWIIYH+ARW GSGWTR V AQKFTWN D TPNLGEP DPNKP+A Sbjct: 301 GPGHHSLTTSPDGSEDWIIYHSARWSGSGWTRNVRAQKFTWNADGTPNLGEPVDPNKPIA 360 Query: 358 KPSGEPVRQRYEAEEALLVKDPNGETFPAVRRESSASGGMKIANINNANDYAQFTVNVPE 417 PSGEPVRQRYEAE ALLVKDP+GET PAVR E++ASGG KI NI NANDYAQFTVNVPE Sbjct: 361 IPSGEPVRQRYEAETALLVKDPSGETSPAVRLENTASGGKKITNIKNANDYAQFTVNVPE 420 Query: 418 AGFYMMSVRNANGSPNAAEASHILSVNGSSGANLNIVYSGPNRWGASTAKVYLKEGDNIL 477 AGFY++S RNANG+ N A+AS ILSVNGSSG NLNIVYSG NRWGASTAKVYLK+GDN + Sbjct: 421 AGFYVLSARNANGASNGADASQILSVNGSSGTNLNIVYSGGNRWGASTAKVYLKQGDNSI 480 Query: 478 RFWKGNNLAEIDSMDIFKLD-ASEILFESPGYTLGLGETRNLPLXXXXXXXXXXXXXXXF 536 RF G NLAE+DSMD+ KL+ ASEILF++PGYTLGLGE+R+LP+ Sbjct: 481 RFRAGTNLAEMDSMDVVKLNVASEILFDTPGYTLGLGESRSLPVYEVTGTSYSPINSGVS 540 Query: 537 FSSSNPKVAVIDGGTQVKAVGAGSTTITATYNGKMTTANVTVIAEPESVQSVVMSGLAGI 596 F+SSN ++ ID G ++K + AGS TITA YNG+ +A V V AEP+SV+S+ +SGL I Sbjct: 541 FTSSNKEILDID-GNEMKGLKAGSATITAAYNGQTVSATVVVAAEPKSVKSIAISGLNNI 599 Query: 597 LTSGQTSQPLQVTARYNNYEVQNVTADAQYTSSNPGVARIDSNSATRSVYAVKPGTTLIT 656 L SG T Q LQ+ A YN YEVQ+VT+ A Y+SSNP VA++ + T VY V+PG T+IT Sbjct: 600 LNSGMTGQ-LQLDASYNTYEVQDVTSSASYSSSNPDVAKV---TDTGQVYDVQPGDTVIT 655 Query: 657 GEYNGKKAAFHLTVIA-ASDAVQVVSRVKTPSGVAPKPPGVVDVVYNSKSKKAKIVSWEL 715 Y+GK+A F+LTV S+ QV+++VKTPSG+ P+ PGVVDV Y + A+ SW+L Sbjct: 656 AAYDGKEANFNLTVTPDPSELPQVLTQVKTPSGMTPRLPGVVDVDYKGEKGTAE-ASWKL 714 Query: 716 AGLDFSSLGTVQVPVTLKLGGRNISSAITVEVIPGWGLDDIVNQLRNQLANFSYPLGDGL 775 G+DF+S+G VQVPV L L G +I +A++VEVIPGWGLD+IVNQ+R+++ NFSYPLG+GL Sbjct: 715 EGIDFNSIGHVQVPVILTLNGESIPAAVSVEVIPGWGLDEIVNQIRSRIDNFSYPLGEGL 774 Query: 776 GNYNQSKYDAFVAEVDKAEKMAGNAELSKEQFERELDKXXXXXXXXXXXXNNIQDGVLYN 835 GNY++S Y+A + ++ AE++A +A L++EQF E ++ QDGV YN Sbjct: 775 GNYSRSAYNALLDKLSHAEEIATDASLTEEQFNEEQSSLAQLEADLLGSLSSTQDGVFYN 834 Query: 836 AYRDFSGDTAGKYPYGIITEGLTNGASATVQEENGNKFLRLTTTAASGKANLFLPYTGEV 895 AYRDFSGD GKYP+GI E LTNGA+ATVQEE+GNKFLRLTTTA SGKANLFLPY GEV Sbjct: 835 AYRDFSGDETGKYPFGITVEDLTNGAAATVQEEDGNKFLRLTTTATSGKANLFLPYLGEV 894 Query: 896 KAEADQRIVIEYRARLNSSFQYANGAMIRNDSGTGNYSMVTAFDTGKIIVQDGGTKKAVL 955 A DQRIVIEYRARLN++FQYANGAM RNDSGT NYSMVTAFDTGKI+VQ+GG+KK+VL Sbjct: 895 TATGDQRIVIEYRARLNTNFQYANGAMTRNDSGTSNYSMVTAFDTGKIMVQNGGSKKSVL 954 Query: 956 NVANNIWYKVKIVANWDAKTYTVYIDD--VPVAIDYKFRHTGGDKLTGQLFGVDGYANAS 1013 N A N WYK+K+VANWDAKTYTVYI+D VPVA D+ FRHTGG KLTGQ FGVDGYANAS Sbjct: 955 NYALNTWYKIKMVANWDAKTYTVYINDDPVPVATDFVFRHTGGTKLTGQRFGVDGYANAS 1014 Query: 1014 IDFDDFKAMV 1023 IDFDDFK MV Sbjct: 1015 IDFDDFKVMV 1024 >B3KC40.1 B3KC40_9BACI Alpha-N-arabinofuranosidase EC=3.2.1.55 Length = 465 Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust. Identities = 232/450 (51%), Positives = 292/450 (64%), Gaps = 26/450 (5%) Query: 49 DFYNVIMQVGADPWVYKHTDGFYYNVFVNASGIMVRRAKTITGIEAGERSLAWTPVNGTM 108 +FYNV+MQ GADPWVYKHTDGFYY + + ++ +T ++A + T G Sbjct: 33 NFYNVVMQDGADPWVYKHTDGFYYFTKTTGGNVTIWKSTQLTTVDAAPTRVVETGCCG-- 90 Query: 109 YSSNVWAPEMHYVQDTDGKFKWYIYFAADNGANANHRMYVLENANENPMTGTWAFKGKIT 168 +WAPE+HY+ WYIY+A D+G N NHRMYV+EN + +P GTW +KG+IT Sbjct: 91 ----IWAPELHYINGA-----WYIYYAKDDGDNVNHRMYVMENTSADPTQGTWQYKGQIT 141 Query: 169 DSTDRWAIDGTVLTVNGQHYFIWSGWEETDGSFQNLYIAKMSDPRTISSERVLISTPDHD 228 D T++WAIDGTVL VNGQ YFIWSGWE QNLYIA MS+P TI S RV I+ P H Sbjct: 142 DPTNKWAIDGTVLQVNGQLYFIWSGWEGDTNVRQNLYIAHMSNPWTIDSSRVEIARPTHS 201 Query: 229 WET--SPGKINEGPQVTIKGDTINLVYSANGSWTDSYCLGLITAKIGDDLMNPGSWVKQA 286 WET SP +NEGPQV ++G I+LVYSA+GSWT+ YCLGLITA DL+NP SW K++ Sbjct: 202 WETNHSP-HVNEGPQVIVRGGVISLVYSASGSWTNDYCLGLITASTTSDLLNPASWTKRS 260 Query: 287 QPIFSSANGVYGPGHHSIVASPDGAEDWIIYHAARWPGSGWTRKVHAQKFTWNEDNTPNL 346 QPIF S NG+YGPGHHS SPDG EDW++YH A++ +GW R+V AQKFTW+ D+TPNL Sbjct: 261 QPIFKSGNGLYGPGHHSFTKSPDGTEDWMLYHVAKYNNAGWNREVRAQKFTWHADHTPNL 320 Query: 347 GEPADPNKPVAKPSGEPVRQRYEAEEALLVKDPNGETFPAVRRESSA---SGGMKIANIN 403 G PA+PN P+A PSGE RYE EE TF V S + SGGMK +I+ Sbjct: 321 GVPANPNAPIALPSGEAAHTRYEGEEG---------TFGGVAYASQSPNGSGGMKAGHID 371 Query: 404 NANDYAQFTVNVPEAGFYMMSVRNANGSPNAAEASHILSVNGSSGANLNIVYSGPNRWGA 463 Y +F+V+ P AG Y++ R ANG+ + +LSVNG + +I G WG Sbjct: 372 TPESYVEFSVHAPSAGDYILLARTANGTAGGNWSHLMLSVNGGTANKFHITNKGWENWGL 431 Query: 464 STAKVYLKEGDNILRFWKGNNLAEIDSMDI 493 STA++ LK G N +RF KG EID DI Sbjct: 432 STARIQLKAGVNTIRFSKGEGYGEIDFFDI 461 >B1D8I7.1 B1D8I7_9BACL Alpha-N-arabinofuranosidase EC=3.2.1.55 Length = 485 Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust. Identities = 227/448 (50%), Positives = 287/448 (64%), Gaps = 20/448 (4%) Query: 49 DFYNVIMQVGADPWVYKHTDGFYYNVFVNASGIMVRRAKTITGIEAGERSLAWTPVNGTM 108 +FYNVI Q GADPW+YKHTDGFYY + + ++ ++TG++AG + + T Sbjct: 37 NFYNVIFQDGADPWIYKHTDGFYYFTKTTGGDVTIWKSSSLTGVDAGTKRVISTGC---- 92 Query: 109 YSSNVWAPEMHYVQDTDGKFKWYIYFAADNGANANHRMYVLENANENPMTGTWAFKGKIT 168 NVWAPE+HY+ WYIY+A D+G N NHRMYVLEN + +PMTGTW KG+IT Sbjct: 93 --CNVWAPEIHYING-----AWYIYYAKDDGNNDNHRMYVLENTSADPMTGTWVNKGQIT 145 Query: 169 DSTDRWAIDGTVLTVNGQHYFIWSGWEETDGSFQNLYIAKMSDPRTISSERVLISTPDHD 228 DS +RWAIDGTVL VN YFIWSGWE T Q LYIA MS+P TI S RV I+ P + Sbjct: 146 DSANRWAIDGTVLQVNNNLYFIWSGWEGTTNVSQKLYIAHMSNPWTIDSARVEIAHPTYS 205 Query: 229 WET--SPGKINEGPQVTIKGDTINLVYSANGSWTDSYCLGLITAKIGDDLMNPGSWVKQA 286 WET SP +NEGPQV + I+LVYSA+GSWTD YCLGL+TA +L+ SW K+ Sbjct: 206 WETNTSP-SVNEGPQVIVHNGVISLVYSASGSWTDGYCLGLVTANASSNLLQASSWTKRN 264 Query: 287 QPIFSSANGVYGPGHHSIVASPDGAEDWIIYHAARWPGSGWTRKVHAQKFTWNEDNTPNL 346 QPIF S NG+YGPGHHS SPDG EDWI+YH A++ G+GW R++ AQKFTWN DNTPNL Sbjct: 265 QPIFQSGNGLYGPGHHSFTKSPDGTEDWIVYHTAKYSGAGWNREIRAQKFTWNADNTPNL 324 Query: 347 GEPADPNKPVAKPSGEPVRQRYEAEEALLVKDPNGETFPAVRRESSASGGMKIANINNAN 406 G PA PN P+A PSG+ R RYE E + G + + S K +I+ A+ Sbjct: 325 GVPAAPNTPIAIPSGDTGRVRYEGETGVF----GGAAYASSSPNGSGG--SKAGHIDTAS 378 Query: 407 DYAQFTVNVPEAGFYMMSVRNANGSPNAAEASHILSVNGSSGANLNIVYSGPNRWGASTA 466 Y +F V AG Y+MS R NG+ + +L+VN +S +NL I G WGAS A Sbjct: 379 SYVEFDVYAAAAGDYVMSARTGNGTTGLDWSYLVLTVNNTSSSNLYITNKGWENWGASVA 438 Query: 467 KVYLKEGDNILRFWKGNNLAEIDSMDIF 494 ++ L G N +RF KG+ E+D D+F Sbjct: 439 RLTLNAGWNKIRFSKGDGYGELDCFDLF 466 >B1DF64.1 B1DF64_9BACL Ig domain protein group 2 domain protein Length = 1955 Score = 350 bits (897), Expect = 7e-94, Method: Compositional matrix adjust. Identities = 179/284 (63%), Positives = 212/284 (74%), Gaps = 2/284 (0%) Query: 742 AITVEVIPGWGLDDIVNQLRNQLANFSYPLGDGLGNYNQSKYDAFVAEVDKAEKMAGNAE 801 ++ E G L V+ R ++ SYPLGD LG+Y Q+ YD+ + ++ A+ +A + Sbjct: 1209 SLRTESTAGQRLQAAVDAKRAGMSGISYPLGDALGHYRQAAYDSLMNALNAADALAKSGT 1268 Query: 802 LSKEQFERELDKXXXXXXXXXXXXNNIQDGVLYNAYRDFSGDTAGKYPYGIITEGLTNGA 861 +++Q + L+ QDGV YNAYRDFSGD AG+ PYG E LTNGA Sbjct: 1269 ATEQQADEALNAITVAETALANSLVLTQDGVAYNAYRDFSGDEAGEVPYGFNVEDLTNGA 1328 Query: 862 SATVQEENGNKFLRLTTTAASGKANLFLPYTGEVKAEADQRIVIEYRARLNSSFQYANGA 921 +ATVQEE+GNKFLRLTTTA SGKANLFLPY GEV A DQRIVIEYRARLN++FQYANGA Sbjct: 1329 AATVQEEDGNKFLRLTTTATSGKANLFLPYLGEVTATGDQRIVIEYRARLNTNFQYANGA 1388 Query: 922 MIRNDSGTGNYSMVTAFDTGKIIVQDGGTKKAVLNVANNIWYKVKIVANWDAKTYTVYID 981 M RNDSGT NYSMVTAFDTGKI+VQ+GG+KK+VLN A N WY +K+VANWDAKTYTVYI+ Sbjct: 1389 MTRNDSGTSNYSMVTAFDTGKIMVQNGGSKKSVLNYALNTWYDIKMVANWDAKTYTVYIN 1448 Query: 982 D--VPVAIDYKFRHTGGDKLTGQLFGVDGYANASIDFDDFKAMV 1023 D VPVA D+ FRHTGG +LTGQ FGVDGYANASIDFDDFK MV Sbjct: 1449 DDPVPVATDFVFRHTGGTELTGQRFGVDGYANASIDFDDFKVMV 1492 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.314 0.131 0.392 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 6,353,124,403 Number of extensions: 278648147 Number of successful extensions: 513486 Number of sequences better than 1.0e-05: 242 Number of HSP's gapped: 512623 Number of HSP's successfully gapped: 247 Length of query: 1026 Length of database: 3,060,696,203 Length adjustment: 146 Effective length of query: 880 Effective length of database: 1,685,228,013 Effective search space: 1483000651440 Effective search space used: 1483000651440 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 137 (57.4 bits)