BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0469.0006.p (244 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value A7GI35.1 A7GI35_CLOBL Putative uncharacterized protein 173 1e-41 B1IMY3.1 B1IMY3_CLOBK Putative uncharacterized protein 172 3e-41 B8I6T5.1 B8I6T5_CLOCE Putative uncharacterized protein 151 5e-35 C1FV59.1 C1FV59_CLOBJ Putative uncharacterized protein 150 7e-35 B1QB35.1 B1QB35_CLOBO Putative uncharacterized protein 150 9e-35 >A7GI35.1 A7GI35_CLOBL Putative uncharacterized protein Length = 371 Score = 173 bits (439), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 90/214 (42%), Positives = 130/214 (60%), Gaps = 15/214 (7%) Query: 3 EKLEEVQEKCGKKGSYFINYG-DDHLGHADFLNDLVFGQKEIIDCTTPILAVVGIAENTH 61 +++E ++E C KG+ FI Y + + +++ L EI + TP++ V+G+ EN H Sbjct: 111 KEIEMIEEVCKYKGNIFIQYPLNKNYEICSYVDKL-----EIQEIKTPVIFVMGVGENAH 165 Query: 62 KFQLQLDLKSAXXXXXNMGYKVSVVGSRSYCEFLGFHSFPGFM-KELISESDKILCYNRY 120 KF++QL ++ NMGYKVS VGSR+YCE FHSFP FM + SE++KI +N + Sbjct: 166 KFEIQLSVRE---NLFNMGYKVSQVGSRNYCEMFNFHSFPEFMYSNMYSETEKIKLFNNF 222 Query: 121 IKQIESTEEPDLIIVAVPGGFMRYNNKITNGFGITAYEIFQAVVPDAXXXXXXVVSLFHE 180 IK IE+ E PD+II+ +PG MR NNK T FG+ A+E+ QAV PDA ++S+ +E Sbjct: 223 IKNIETQENPDVIIIGIPGTIMRINNKATYDFGVLAFEVSQAVKPDA-----SILSVLYE 277 Query: 181 KYTAEYLDGIINSIKYKFGLDIDALNITNRQIDW 214 Y + + I +KYKF DI N N IDW Sbjct: 278 NYLPSFFEKIAQEVKYKFACDISCFNYVNSMIDW 311 >B1IMY3.1 B1IMY3_CLOBK Putative uncharacterized protein Length = 371 Score = 172 bits (435), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 90/214 (42%), Positives = 130/214 (60%), Gaps = 15/214 (7%) Query: 3 EKLEEVQEKCGKKGSYFINYG-DDHLGHADFLNDLVFGQKEIIDCTTPILAVVGIAENTH 61 +++E ++E C KG+ FI Y + + +++ L EI + TP++ V+G+ EN H Sbjct: 111 KEIEMIEEVCKYKGNIFIQYPLNKNYEICSYVDKL-----EIQEIKTPVIFVMGVGENAH 165 Query: 62 KFQLQLDLKSAXXXXXNMGYKVSVVGSRSYCEFLGFHSFPGFM-KELISESDKILCYNRY 120 KF++QL ++ NMGYKVS VGSR+YCE FHSFP FM + SE++KI +N + Sbjct: 166 KFEIQLSVRE---NLFNMGYKVSQVGSRNYCEMFNFHSFPEFMYSNMYSETEKIKLFNNF 222 Query: 121 IKQIESTEEPDLIIVAVPGGFMRYNNKITNGFGITAYEIFQAVVPDAXXXXXXVVSLFHE 180 IK IE+ E PD+II+ +PG MR NNK T FG+ A+E+ QAV PDA ++S+ +E Sbjct: 223 IKNIENQENPDVIIIGIPGTIMRINNKATYDFGVLAFEVSQAVKPDA-----SILSVLYE 277 Query: 181 KYTAEYLDGIINSIKYKFGLDIDALNITNRQIDW 214 Y + + I +KYKF DI N N IDW Sbjct: 278 NYLPSFFEKIAQEVKYKFVCDISCFNYVNSMIDW 311 >B8I6T5.1 B8I6T5_CLOCE Putative uncharacterized protein Length = 375 Score = 151 bits (382), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 92/228 (40%), Positives = 134/228 (58%), Gaps = 14/228 (6%) Query: 3 EKLEEVQEKCGKKGSYFINYGDDHLGHADFL-NDLVFGQKEIIDCTTPILAVVGIAENTH 61 E ++E+ C +G YF Y D G+ + L D++ + I + TP++ +GI E T+ Sbjct: 112 EAIKEIASLCNCEGVYF-KYFD---GNQNVLPADIIIENESIEEIDTPVILTLGITEKTN 167 Query: 62 KFQLQLDLKSAXXXXXNMGYKVSVVGSRSYCEFLGFHSFPGFM-KELISESDKILCYNRY 120 KF++QL L+ GYK+S +G+R YCE +GFH FP FM IS+ +K+L +NR+ Sbjct: 168 KFEIQLALREKIQ---KAGYKISQIGTRPYCEMMGFHPFPSFMYGNAISDVNKVLMFNRF 224 Query: 121 IKQIESTEEPDLIIVAVPGGFMRYNNKITNGFGITAYEIFQAVVPDAXXXXXXVVSLFHE 180 IK+IE TEEPD+II+ +PGG M +N + TN FG+ A+EI QA+ PD + SL +E Sbjct: 225 IKKIEETEEPDIIIIGIPGGIMPFNREFTNKFGLVAFEISQAITPDV-----VIASLLYE 279 Query: 181 KYTAEYLDGIINSIKYKFGLDIDALNITNRQIDWVEMTNSKPSSVNTL 228 Y E D +N +KYK G ++D NI N Q DW S +L Sbjct: 280 DYKPEGFDTYMNLVKYKLGFEVDFFNIANMQFDWKRANQEHVKSYTSL 327 >C1FV59.1 C1FV59_CLOBJ Putative uncharacterized protein Length = 376 Score = 150 bits (380), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 88/191 (46%), Positives = 122/191 (63%), Gaps = 11/191 (5%) Query: 48 TPILAVVGIAENTHKFQLQLDLKSAXXXXXNMGYKVSVVGSRSYCEFLGFHSFPGFMKEL 107 TPI+ V+G + + KF++QL L+ MGYKVS VGSR+YCE + FHSFP FM Sbjct: 153 TPIIFVLGTGDRSGKFEIQLCLRE---NLMQMGYKVSQVGSRNYCELMDFHSFPQFMYST 209 Query: 108 -ISESDKILCYNRYIKQIESTEEPDLIIVAVPGGFMRYNNKITNGFGITAYEIFQAVVPD 166 I+E +K++ +N +IK IE + D+II+ +PGG M +N+K TNGFGI AYEI QAV PD Sbjct: 210 EITEEEKVIYFNNFIKDIELNDNSDVIIIGIPGGIMPFNDKYTNGFGILAYEISQAVKPD 269 Query: 167 AXXXXXXVVSLFHEKYTAEYLDGIINSIKYKFGLDIDALNITNRQIDWVEMTNSKPSSVN 226 A V + +E Y EY + I N+IKYKFG +ID N++N Q DW++ N Sbjct: 270 A-----AVFTTLYEDYNKEYFESIDNTIKYKFGFEIDCYNLSNIQFDWMKFENLNEQFY- 323 Query: 227 TLTLNQDFMQK 237 +TL+ +F+ K Sbjct: 324 -ITLDYNFISK 333 >B1QB35.1 B1QB35_CLOBO Putative uncharacterized protein Length = 376 Score = 150 bits (379), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 87/191 (45%), Positives = 122/191 (63%), Gaps = 11/191 (5%) Query: 48 TPILAVVGIAENTHKFQLQLDLKSAXXXXXNMGYKVSVVGSRSYCEFLGFHSFPGFMKEL 107 TPI+ V+G + + KF++QL L+ MGYK+S VGSR+YCE + FHSFP FM Sbjct: 153 TPIIFVLGTGDRSGKFEIQLCLRE---NLMQMGYKISQVGSRNYCELMDFHSFPKFMYST 209 Query: 108 -ISESDKILCYNRYIKQIESTEEPDLIIVAVPGGFMRYNNKITNGFGITAYEIFQAVVPD 166 I+E +K++ +N +IK IE + D+II+ +PGG M +N+K TNGFGI AYEI QAV PD Sbjct: 210 EITEEEKVIYFNNFIKDIELNDNSDVIIIGIPGGIMPFNDKYTNGFGILAYEISQAVKPD 269 Query: 167 AXXXXXXVVSLFHEKYTAEYLDGIINSIKYKFGLDIDALNITNRQIDWVEMTNSKPSSVN 226 A V + +E Y EY + I N+IKYKFG +ID N++N Q DW++ N Sbjct: 270 A-----AVFTTLYEDYNKEYFESIDNTIKYKFGFEIDCYNLSNIQFDWMKFENLNEQFY- 323 Query: 227 TLTLNQDFMQK 237 +TL+ +F+ K Sbjct: 324 -ITLDYNFISK 333 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.319 0.138 0.402 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,376,362,157 Number of extensions: 53612765 Number of successful extensions: 103215 Number of sequences better than 1.0e-05: 13 Number of HSP's gapped: 103186 Number of HSP's successfully gapped: 13 Length of query: 244 Length of database: 3,060,696,203 Length adjustment: 132 Effective length of query: 112 Effective length of database: 1,817,122,223 Effective search space: 203517688976 Effective search space used: 203517688976 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 129 (54.3 bits)