BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0466.0001.p
         (87 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

A6CK11.1 A6CK11_9BACI Acetyltransferase, GNAT family protein           79   1e-13
B5V4K4.1 B5V4K4_BACCE Acetyltransferase, GNAT family                   76   1e-12
B3Z627.1 B3Z627_BACCE Acetyltransferase, GNAT family                   76   1e-12
C2YUF8.1 C2YUF8_BACCE GCN5-related N-acetyltransferase                 76   1e-12
C1EMG5.1 C1EMG5_BACC3 Acetyltransferase, GNAT family                   76   1e-12

>A6CK11.1 A6CK11_9BACI Acetyltransferase, GNAT family protein
          Length = 175

 Score = 79.0 bits (193), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 31/57 (54%), Positives = 46/57 (80%)

Query: 11 MGRRLELIKPSVDLENEYLSFYKEWLDSGEEMYPWVIEKDPTNFNAMVQFLIDNENG 67
          MG ++ L+KP+++L+ +YL FY+EW DSGE+M PWVIEKDP++F AM+ F+ +N  G
Sbjct: 1  MGNKVTLVKPTINLKKQYLEFYQEWKDSGEDMVPWVIEKDPSDFQAMLSFIENNSKG 57


>B5V4K4.1 B5V4K4_BACCE Acetyltransferase, GNAT family
          Length = 172

 Score = 75.9 bits (185), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 33/53 (62%), Positives = 40/53 (75%)

Query: 15 LELIKPSVDLENEYLSFYKEWLDSGEEMYPWVIEKDPTNFNAMVQFLIDNENG 67
          + L+ P+ DL++EYL FY EW DSGE M PWVI KDP+NF AMVQ L+D  NG
Sbjct: 3  ISLLTPTTDLQDEYLDFYNEWKDSGETMIPWVISKDPSNFPAMVQELLDAHNG 55


>B3Z627.1 B3Z627_BACCE Acetyltransferase, GNAT family
          Length = 172

 Score = 75.9 bits (185), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 33/53 (62%), Positives = 41/53 (77%)

Query: 15 LELIKPSVDLENEYLSFYKEWLDSGEEMYPWVIEKDPTNFNAMVQFLIDNENG 67
          + L+ P+ DL++EYL+FY EW DSGE M PWVI KDP+NF AMVQ L+D  NG
Sbjct: 3  VSLLTPTTDLQDEYLNFYNEWKDSGETMIPWVITKDPSNFPAMVQELLDAHNG 55


>C2YUF8.1 C2YUF8_BACCE GCN5-related N-acetyltransferase
          Length = 172

 Score = 75.9 bits (185), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 33/53 (62%), Positives = 39/53 (73%)

Query: 15 LELIKPSVDLENEYLSFYKEWLDSGEEMYPWVIEKDPTNFNAMVQFLIDNENG 67
          + L+ P+ DL+ EYL FYKEW DSGE M PWVI KDP+NF AM+Q L D  NG
Sbjct: 3  VSLLTPTTDLQEEYLDFYKEWKDSGETMIPWVISKDPSNFTAMIQELHDAHNG 55


>C1EMG5.1 C1EMG5_BACC3 Acetyltransferase, GNAT family
          Length = 172

 Score = 75.9 bits (185), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 33/53 (62%), Positives = 40/53 (75%)

Query: 15 LELIKPSVDLENEYLSFYKEWLDSGEEMYPWVIEKDPTNFNAMVQFLIDNENG 67
          + L+ P+ DL++EYL FY EW DSGE M PWVI KDP+NF AMVQ L+D  NG
Sbjct: 3  VSLLTPTTDLQDEYLDFYNEWKDSGETMIPWVITKDPSNFPAMVQELLDAHNG 55


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.319    0.142    0.425 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 527,279,283
Number of extensions: 19544851
Number of successful extensions: 37567
Number of sequences better than 1.0e-05: 79
Number of HSP's gapped: 37567
Number of HSP's successfully gapped: 79
Length of query: 87
Length of database: 3,060,696,203
Length adjustment: 57
Effective length of query: 30
Effective length of database: 2,523,698,348
Effective search space: 75710950440
Effective search space used: 75710950440
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 125 (52.8 bits)