BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0462.0015.p
         (79 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B3KLC1.1 B3KLC1_9BACI Putative uncharacterized protein                131   2e-29
B1DL13.1 B1DL13_9BACL Putative uncharacterized protein                114   2e-24

>B3KLC1.1 B3KLC1_9BACI Putative uncharacterized protein
          Length = 77

 Score =  131 bits (329), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 60/77 (77%), Positives = 68/77 (88%)

Query: 3  MIKKHEIYKTDKWNMMTVEVQGRYIVLREISDQWGEETHTFMSRPAMMQWVNNRFNKESY 62
          MIKKHEIYK DKWNMMTVEVQGRYIVLREISDQWGEETHTFMSRPA+M W  NRF KE +
Sbjct: 1  MIKKHEIYKKDKWNMMTVEVQGRYIVLREISDQWGEETHTFMSRPALMHWAQNRFPKEDF 60

Query: 63 KDNEEEYKNIMAAFKEV 79
          +  E+E++ +MAAFK+V
Sbjct: 61 EGREDEWREMMAAFKQV 77


>B1DL13.1 B1DL13_9BACL Putative uncharacterized protein
          Length = 77

 Score =  114 bits (285), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 51/77 (66%), Positives = 62/77 (80%)

Query: 3  MIKKHEIYKTDKWNMMTVEVQGRYIVLREISDQWGEETHTFMSRPAMMQWVNNRFNKESY 62
          M KKHEI+KTDK+NM+TVEVQG+ +++REISDQWGEETHTF+SRP MM W  NRF  E +
Sbjct: 1  MFKKHEIFKTDKYNMLTVEVQGKTLIVREISDQWGEETHTFVSRPEMMHWAENRFKPEQF 60

Query: 63 KDNEEEYKNIMAAFKEV 79
             EEE +NI+ A KEV
Sbjct: 61 AGREEERENILKALKEV 77


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.317    0.128    0.387 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 468,250,037
Number of extensions: 15353785
Number of successful extensions: 38006
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 38006
Number of HSP's successfully gapped: 2
Length of query: 79
Length of database: 3,060,696,203
Length adjustment: 50
Effective length of query: 29
Effective length of database: 2,589,645,453
Effective search space: 75099718137
Effective search space used: 75099718137
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 125 (52.8 bits)