BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0462.0007.p (645 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KLB6.1 B3KLB6_9BACI ABC transporter related 899 0.0 B1DAP2.1 B1DAP2_9BACL ABC transporter related 779 0.0 A4J5I6.1 A4J5I6_DESRM ABC transporter related 729 0.0 B8I4F7.1 B8I4F7_CLOCE ABC transporter related 712 0.0 Q24VU6.1 Q24VU6_DESHY Putative uncharacterized protein 712 0.0 >B3KLB6.1 B3KLB6_9BACI ABC transporter related Length = 645 Score = 899 bits (2324), Expect = 0.0, Method: Compositional matrix adjust. Identities = 443/643 (68%), Positives = 527/643 (81%), Gaps = 6/643 (0%) Query: 1 MNIMTVEHLSKSYGEKTLFRDASFGMDDRNKIGVIGVNGTGKSTFLKIIAGLDTPDDGQI 60 MNI+TVE ++KSYG+K LF+DASFGM+D++KIG+IGVNGTGKSTF+++IAGL+ PD G+I Sbjct: 1 MNILTVEQVTKSYGDKILFQDASFGMEDQDKIGIIGVNGTGKSTFMRVIAGLEPPDAGKI 60 Query: 61 AIGNAVRVQYLAQNPPYEPDNTVLQQVFAGDEPELAAMREYMETLALLESRPGDSALERR 120 ++GN +RV+YLAQNP ++PDNTVLQQVF GD PE+ A+REY ET+ LLE P L+++ Sbjct: 61 SMGNRIRVRYLAQNPEFDPDNTVLQQVFEGDLPEMKAVREYTETMELLELHPNREELQQK 120 Query: 121 LVQIGQAIDAAGTWQLESEAKTVLTKLGITQFDARMESLSGGQRKRVALAAALITPSELL 180 L+++ Q +D WQLES+AKTVL+KLGI +DA+M +LSGGQRKRVALAAALI PS+LL Sbjct: 121 LLKLNQTLDTLQAWQLESDAKTVLSKLGIRNYDAKMGTLSGGQRKRVALAAALIQPSDLL 180 Query: 181 ILDEPTNHIDTDSVAWLEQYLQKRRGALLMVTHDRYFLERVASVMLELDGGQLYRYEANY 240 ILDEPTNHID +SVAWLEQYLQKRRGALLM+THDRYFL+RVA+VMLELD G+L+RYEANY Sbjct: 181 ILDEPTNHIDNESVAWLEQYLQKRRGALLMITHDRYFLDRVANVMLELDHGRLFRYEANY 240 Query: 241 SRFXXXXXXXXXXXXXXXXXXXNLLRTELAWIRRGAKARSTKQKARIDRFEKLKESQGPA 300 SRF NLLR+ELAWIRRGAKAR+TKQKARI+RFEKLK+ + Sbjct: 241 SRFLELKAEREEREAASEQKRQNLLRSELAWIRRGAKARTTKQKARIERFEKLKDQEMVH 300 Query: 301 SAGALDISVASTRLGRKIIEMKDLTKSLDGRTLIKDLTYIAVPQDRVGIVGPNGSGKSTL 360 S+G LD+SVASTRLGRKI+E++ L D + LI+DL+YIAVP+DR+GIVGPNGSGKSTL Sbjct: 301 SSGELDVSVASTRLGRKILEIEGLRMKSDDKVLIQDLSYIAVPEDRIGIVGPNGSGKSTL 360 Query: 361 LNLIAGKLQPDRGEVELGATVKLGYFTQEHQDMDDSLRVIEYVKEEAEIIRTADGSVITA 420 LNLIAG+LQPD GEV LG TVKLGYFTQEHQ+MD S RVIEY+K+EAE++RTADGS ITA Sbjct: 361 LNLIAGRLQPDAGEVVLGPTVKLGYFTQEHQEMDGSQRVIEYIKDEAEVVRTADGSAITA 420 Query: 421 GQMLERFLFPPAMQWTPIAKLSGGEKRRLYLLRVLMGAPNVLLLDEPTNDLDIGTLAVLE 480 QMLERFLFPPA+QWTPIAKLSGGEKRRLYLLRVLM APNVLLLDEPTNDLDI TL+VLE Sbjct: 421 AQMLERFLFPPALQWTPIAKLSGGEKRRLYLLRVLMSAPNVLLLDEPTNDLDIQTLSVLE 480 Query: 481 DYLDEFPGVVFTVSHDRFFLDRTVDKLIAFE-NGSIRLHVGNYSEYEEWMANN-IPARGG 538 YLDEFPGV VSHDRFFLDRTVDK++AFE NG IR+HVG+YSEY EWM + A GG Sbjct: 481 QYLDEFPGVCIVVSHDRFFLDRTVDKIMAFEGNGQIRVHVGSYSEYAEWMQRHGGEAAGG 540 Query: 539 DTPKEAGTGKNSSAPEQGQTVPAAPPAREKLKFTFKEQREYEGIDEAIEQAEQHLADISA 598 EA + K +S + AP RE+LKF++KEQREYE ID IE AE LA I + Sbjct: 541 KA--EASSAKPASGGSGSASAQEAP--RERLKFSYKEQREYEQIDGLIEAAENKLASIQS 596 Query: 599 QMEAAFADSGKLQELVEKQRQGEAELERLMERWTYLNELAEKI 641 +ME A +D+ +LQEL++ Q + E ELE LMERWTYLNELAEKI Sbjct: 597 EMETAGSDAARLQELMKSQEETEGELEHLMERWTYLNELAEKI 639 >B1DAP2.1 B1DAP2_9BACL ABC transporter related Length = 648 Score = 779 bits (2012), Expect = 0.0, Method: Compositional matrix adjust. Identities = 389/656 (59%), Positives = 495/656 (75%), Gaps = 22/656 (3%) Query: 1 MNIMTVEHLSKSYGEKTLFRDASFGMDDRNKIGVIGVNGTGKSTFLKIIAGLDTPDDGQI 60 M++++VEH++KSYGEK LF D +FG+++ +KIG+IGVNGTGKSTFLK+IAG + D G I Sbjct: 1 MHLLSVEHITKSYGEKMLFEDVTFGVEEGDKIGIIGVNGTGKSTFLKVIAGFEPADSGSI 60 Query: 61 AIGNAVRVQYLAQNPPYEPDNTVLQQVFAGDEPELAAMREYMETLALLESRPGDSALERR 120 +IGN V V+ LAQ+P + P T L+ V GD +L A+REY L LE +P D +L+ R Sbjct: 61 SIGNRVVVRMLAQDPTFAPGETALEHVLGGDSTQLRAVREYAAALEALELKPSDESLQER 120 Query: 121 LVQIGQAIDAAGTWQLESEAKTVLTKLGITQFDARMESLSGGQRKRVALAAALITPSELL 180 L++ Q +D W LESEAKT L +LGI F+ ++E+ SGGQRKRVA+AAAL+ PS++L Sbjct: 121 LIKANQKMDELDAWTLESEAKTALGRLGIQNFNDKVETFSGGQRKRVAMAAALLQPSDIL 180 Query: 181 ILDEPTNHIDTDSVAWLEQYLQKRRGALLMVTHDRYFLERVASVMLELDGGQLYRYEANY 240 ILDEPTNHID +SVAWLE LQKR+GALLM+THDRYFL+RV++ ++ELD G+ + YEANY Sbjct: 181 ILDEPTNHIDNESVAWLESMLQKRKGALLMITHDRYFLDRVSNRVIELDKGRAFFYEANY 240 Query: 241 SRFXXXXXXXXXXXXXXXXXXXNLLRTELAWIRRGAKARSTKQKARIDRFEKLKESQGPA 300 SRF NLLR ELAWIRRGAKAR+TKQKARIDRFE LK +Q P Sbjct: 241 SRFLELKVEREEREAASEDKRQNLLRNELAWIRRGAKARTTKQKARIDRFEVLK-AQAPK 299 Query: 301 SAGA-LDISVASTRLGRKIIEMKDLTKSLDGRTLIKDLTYIAVPQDRVGIVGPNGSGKST 359 AG +D+SVASTRLG+KI+E++ ++K RTLI+D +YIAVP+DRVGIVG NG GKST Sbjct: 300 QAGGKMDVSVASTRLGKKIVEIEAVSKRFGDRTLIRDFSYIAVPEDRVGIVGRNGEGKST 359 Query: 360 LLNLIAGKLQPDRGEVELGATVKLGYFTQEHQDMDDSLRVIEYVKEEAEIIRTADGSVIT 419 LL LIA KLQPD G++ELG TVKLG+F+QEH++MD+SLRVIEY++E AE ++TADG+ I+ Sbjct: 360 LLKLIADKLQPDEGKIELGMTVKLGWFSQEHEEMDESLRVIEYIREGAEQVKTADGTTIS 419 Query: 420 AGQMLERFLFPPAMQWTPIAKLSGGEKRRLYLLRVLMGAPNVLLLDEPTNDLDIGTLAVL 479 AGQMLERFLF PAMQW+ I KLSGGEKRRL LLRVLM APNVLLLDEPTNDLDI TL+VL Sbjct: 420 AGQMLERFLFAPAMQWSIIGKLSGGEKRRLQLLRVLMNAPNVLLLDEPTNDLDIATLSVL 479 Query: 480 EDYLDEFPGVVFTVSHDRFFLDRTVDKLIAFE-NGSIRLHVGNYSEYEEWMANNIPARGG 538 EDYLD+FPGVVF VSHDR+FLDRTVDK+ AFE +G I HVGNY+EY+E+ + G Sbjct: 480 EDYLDDFPGVVFVVSHDRYFLDRTVDKIFAFEGDGVITQHVGNYTEYQEY-----AEKYG 534 Query: 539 DTPKEAGTGKNSSAPEQGQTVPAA----------PPAREKLKFTFKEQREYEGIDEAIEQ 588 + AG+ K P Q PAA P+ E+L+ ++K+Q+E+E ID I + Sbjct: 535 VSTDSAGSVK----PAQAAVKPAAESSAAADGGSKPSGERLRMSYKDQKEFEQIDGWIAK 590 Query: 589 AEQHLADISAQMEAAFADSGKLQELVEKQRQGEAELERLMERWTYLNELAEKIAGK 644 AE+ LA ++ +M A +DS LQ+LV++Q+Q E +LE LM+RW LNELAE+IA + Sbjct: 591 AEEQLAAVTEKMNNAGSDSALLQQLVDEQQQLETKLEELMDRWAELNELAEQIAAQ 646 >A4J5I6.1 A4J5I6_DESRM ABC transporter related Length = 639 Score = 729 bits (1883), Expect = 0.0, Method: Compositional matrix adjust. Identities = 354/646 (54%), Positives = 470/646 (72%), Gaps = 12/646 (1%) Query: 1 MNIMTVEHLSKSYGEKTLFRDASFGMDDRNKIGVIGVNGTGKSTFLKIIAGLDTPDDGQI 60 MN++TVE LSKS+G K +F SFG+ D KIG++G+NGTGKST LK++AG +T D G+I Sbjct: 1 MNLLTVEELSKSFGIKNIFDKVSFGIADGEKIGLVGINGTGKSTLLKVLAGKETADHGKI 60 Query: 61 AIGNAVRVQYLAQNPPYEPDNTVLQQVFAGDEPELAAMREYMETLALLESRPGDSALERR 120 + N ++V+YL QNP ++ TV+QQVF GD P + + EY +++ LL S PGD L+++ Sbjct: 61 TMVNNLQVEYLPQNPLFDEKATVIQQVFKGDSPVMHLLLEYKKSIDLLNSNPGDQELQKQ 120 Query: 121 LVQIGQAIDAAGTWQLESEAKTVLTKLGITQFDARMESLSGGQRKRVALAAALITPSELL 180 ++Q+GQ +D+ WQLESEAKTVLTKLGI+ F++ + +LSGGQRKRV+LA+ALI P+ LL Sbjct: 121 MLQLGQQMDSMDAWQLESEAKTVLTKLGISNFNSPVAALSGGQRKRVSLASALINPANLL 180 Query: 181 ILDEPTNHIDTDSVAWLEQYLQKRRGALLMVTHDRYFLERVASVMLELDGGQLYRYEANY 240 ILDEPTNHID +++AWLEQYLQKR+GALLM+THDRYFL+RV + ELD QLY+Y+ NY Sbjct: 181 ILDEPTNHIDNETIAWLEQYLQKRKGALLMITHDRYFLDRVVDTIWELDNAQLYQYKGNY 240 Query: 241 SRFXXXXXXXXXXXXXXXXXXXNLLRTELAWIRRGAKARSTKQKARIDRFEKLKESQGPA 300 S F N+LR ELAWI+RGAKARSTKQKARI+RFE LKES Sbjct: 241 STFLQLKAAREEQQESSEKKRQNILRKELAWIQRGAKARSTKQKARINRFELLKESNPEL 300 Query: 301 SAGALDISVASTRLGRKIIEMKDLTKSLDGRTLIKDLTYIAVPQDRVGIVGPNGSGKSTL 360 S L+ISV ++RLG+K+IE+K ++K D +++D YI DRVGIVGPNGSGK+TL Sbjct: 301 SQSKLEISVEASRLGKKVIELKHISKKFDHIEILRDFNYIFAKNDRVGIVGPNGSGKTTL 360 Query: 361 LNLIAGKLQPDRGEVELGATVKLGYFTQEHQDMDDSLRVIEYVKEEAEIIRTADGSVITA 420 LN+IA +L PD G+VE G TVK+GYF+Q++ +++ +RVI+Y+KE AE + T+DG +I+A Sbjct: 361 LNIIARRLTPDSGKVEQGTTVKIGYFSQDNAQLNEGIRVIDYIKEVAEYLPTSDGGMISA 420 Query: 421 GQMLERFLFPPAMQWTPIAKLSGGEKRRLYLLRVLMGAPNVLLLDEPTNDLDIGTLAVLE 480 QML+RFLFPP +QWT I+KLSGGEKRRLYLLR+LM PNVLL DEPTNDLDI TL +LE Sbjct: 421 SQMLDRFLFPPKVQWTTISKLSGGEKRRLYLLRILMECPNVLLFDEPTNDLDIQTLTILE 480 Query: 481 DYLDEFPGVVFTVSHDRFFLDRTVDKLIAF-ENGSIRLHVGNYSEYEEWMANNIPARGGD 539 DYLD+F G + VSHDR+FLDRTV+K++AF +NG I VGNYSEY++++ N Sbjct: 481 DYLDDFNGTLMVVSHDRYFLDRTVEKILAFSDNGEIIDFVGNYSEYQKFIQN-------- 532 Query: 540 TPKEAGTGKNSSAPEQGQTVPAAPPAREK-LKFTFKEQREYEGIDEAIEQAEQHLADISA 598 K + + PE+ + +EK LKFT+KEQ+E+E I++ I + E L + Sbjct: 533 --KRQEQERTNDKPEKKNKQQSVEKKKEKSLKFTYKEQKEFEQIEDVIAEVEGELEVVQQ 590 Query: 599 QMEAAFADSGKLQELVEKQRQGEAELERLMERWTYLNELAEKIAGK 644 ++ A +D LQ+L+ Q+ E LE LM RWTYLNELAE+I K Sbjct: 591 KINEAGSDYEALQKLLTSQQGLENRLEELMNRWTYLNELAEEIEKK 636 >B8I4F7.1 B8I4F7_CLOCE ABC transporter related Length = 643 Score = 712 bits (1837), Expect = 0.0, Method: Compositional matrix adjust. Identities = 362/646 (56%), Positives = 466/646 (72%), Gaps = 14/646 (2%) Query: 1 MNIMTVEHLSKSYGEKTLFRDASFGMDDRNKIGVIGVNGTGKSTFLKIIAGLDTPDDGQI 60 MNI++ E +SKSY EK LF D S G+ + +KIG+IGVNGTGKST LKIIAG+++ D G+I Sbjct: 1 MNILSAEGISKSYSEKILFNDISLGIGEGDKIGLIGVNGTGKSTLLKIIAGMESVDTGRI 60 Query: 61 AIGNAVRVQYLAQNPPYEPDNTVLQQVFAGDEPELAAMREYMETLALLESRPGDSALERR 120 N VRV YL Q+P ++P TVLQQVF G E+ +REY E L P D LE++ Sbjct: 61 LKSNKVRVGYLEQSPAFKPGTTVLQQVFRGHSSEMLLLREYEEILLKSSQNPSDEKLEKK 120 Query: 121 LVQIGQAIDAAGTWQLESEAKTVLTKLGITQFDARMESLSGGQRKRVALAAALITPSELL 180 L+ + +D W LESEAKT+LT+LGI FDA + LSGGQRKR+A+A ALI P+ELL Sbjct: 121 LLDLMHQMDTMNAWTLESEAKTILTRLGIDSFDADVADLSGGQRKRIAMAGALINPTELL 180 Query: 181 ILDEPTNHIDTDSVAWLEQYLQKRRGALLMVTHDRYFLERVASVMLELDGGQLYRYEANY 240 ILDEPTNHID ++V WLE+YL ++GALLMVTHDRYFL+RVA+ ++ELD G+LY Y+ANY Sbjct: 181 ILDEPTNHIDNETVDWLEKYLNNKKGALLMVTHDRYFLDRVANRIIELDNGKLYSYQANY 240 Query: 241 SRFXXXXXXXXXXXXXXXXXXXNLLRTELAWIRRGAKARSTKQKARIDRFEKLKESQGPA 300 +RF NL R EL WIRRGA ARSTKQKARI+RFEKLKE+ GP Sbjct: 241 TRFLELKAQREELEQASERKRQNLYRNELEWIRRGALARSTKQKARIERFEKLKEADGPK 300 Query: 301 SAGALDISVASTRLGRKIIEMKDLTKSLDGRTLIKDLTYIAVPQDRVGIVGPNGSGKSTL 360 ++I V S RLGRKIIE++++ KS +TLI D +Y+ + DR+GI+GPNG GKSTL Sbjct: 301 QDENIEIQVGSARLGRKIIEVENVKKSYGDKTLISDFSYVLLRDDRIGIIGPNGIGKSTL 360 Query: 361 LNLIAGKLQPDRGEVELGATVKLGYFTQEHQDMDDSLRVIEYVKEEAEIIRTADGSVITA 420 L L++GK++PD G+VE+G TVK G+FTQE+ DMD +LRVI+Y++ AE I TA+GSV +A Sbjct: 361 LKLLSGKIKPDSGKVEIGETVKTGFFTQENTDMDQNLRVIDYIRSVAEHIETANGSV-SA 419 Query: 421 GQMLERFLFPPAMQWTPIAKLSGGEKRRLYLLRVLMGAPNVLLLDEPTNDLDIGTLAVLE 480 QMLERFLFPP++QWTPI+KLSGGEKRRLYLL +LM APN+LLLDEPTNDLDI TL +LE Sbjct: 420 SQMLERFLFPPSVQWTPISKLSGGEKRRLYLLSILMDAPNILLLDEPTNDLDIQTLTILE 479 Query: 481 DYLDEFPGVVFTVSHDRFFLDRTVDKLIAFEN-GSIRLHVGNYSEYEEWMA----NNIPA 535 YLDEFPG V TVSHDR+FLDRTV+++ +FE G I + GNYS+Y +MA + Sbjct: 480 AYLDEFPGAVITVSHDRYFLDRTVNRIFSFEGYGRITKYAGNYSDYRGYMAGREKQDDTG 539 Query: 536 RGGDTPKEAGTGKNSSAPEQGQTVPAAPPAREKLKFTFKEQREYEGIDEAIEQAEQHLAD 595 + D K+ + +N + ++ + P LKFTFKEQ+E++ ID+ IE E + Sbjct: 540 KAADPDKKNNSSQNKTEWQKNKEKP--------LKFTFKEQKEFDEIDDVIEALETDIEK 591 Query: 596 ISAQMEAAFADSGKLQELVEKQRQGEAELERLMERWTYLNELAEKI 641 + ++ + D KLQEL+EKQ++ E EL+ +ERWTYLNELAEKI Sbjct: 592 VKKDIDQSVTDFAKLQELLEKQQKLEKELDFKLERWTYLNELAEKI 637 >Q24VU6.1 Q24VU6_DESHY Putative uncharacterized protein Length = 653 Score = 712 bits (1837), Expect = 0.0, Method: Compositional matrix adjust. Identities = 356/650 (54%), Positives = 457/650 (70%), Gaps = 6/650 (0%) Query: 1 MNIMTVEHLSKSYGEKTLFRDASFGMDDRNKIGVIGVNGTGKSTFLKIIAGLDTPDDGQI 60 MN++T E L+KSYG K LF+D S G+++ KIG+IGVNGTGKST LKI+AGL+ PD GQI Sbjct: 1 MNLLTAESLTKSYGIKPLFQDISLGIEEGQKIGIIGVNGTGKSTLLKILAGLEQPDQGQI 60 Query: 61 AIGNAVRVQYLAQNPPYEPDNTVLQQVFAGDEPELAAMREYMETLALLESRPGDSALERR 120 N ++++YL Q P ++P+ TVLQQVF G+ P + +R+Y L L P + + Sbjct: 61 TTNNELQLEYLPQEPDFDPEATVLQQVFKGNSPLMKLLRDYETALERLNQDPNSESYQNT 120 Query: 121 LVQIGQAIDAAGTWQLESEAKTVLTKLGITQFDARMESLSGGQRKRVALAAALITPSELL 180 L+Q+GQ +D+ WQ+ESEAK VLTKLGITQFD + +LSGGQRKRVALA ALI PS +L Sbjct: 121 LLQLGQKMDSHNAWQIESEAKAVLTKLGITQFDIPVGTLSGGQRKRVALAGALIQPSNVL 180 Query: 181 ILDEPTNHIDTDSVAWLEQYLQKRRGALLMVTHDRYFLERVASVMLELDGGQLYRYEANY 240 ILDEPTNHID + V WLE YL K +GALLMVTHDRYFL+RVA+ + ELD G+LY Y NY Sbjct: 181 ILDEPTNHIDNEMVDWLENYLHKLKGALLMVTHDRYFLDRVANRIFELDRGKLYAYPGNY 240 Query: 241 SRFXXXXXXXXXXXXXXXXXXXNLLRTELAWIRRGAKARSTKQKARIDRFEKLKESQGPA 300 SRF N+LR ELAWIRRGAKAR+TKQKARIDRFE+L+ Q Sbjct: 241 SRFLELKAERDEQEEATERKRQNILRNELAWIRRGAKARTTKQKARIDRFEQLQADQPEE 300 Query: 301 SAGALDISVASTRLGRKIIEMKDLTKSLDGR-TLIKDLTYIAVPQDRVGIVGPNGSGKST 359 G +++S + RLG+K+I+ L KS G T+I D + I DR+GI+GPNGSGKST Sbjct: 301 KTGKVEVSAGAARLGKKVIQCSHLRKSYSGSGTVIDDFSIILAKYDRIGIIGPNGSGKST 360 Query: 360 LLNLIAGKLQPDRGEVELGATVKLGYFTQEHQDMDDSLRVIEYVKEEAEIIRTADGSVIT 419 LLN++AG++ D GE+E G TVKLGYF QE+++ + +VI+ +K AE+I T+DG V+T Sbjct: 361 LLNILAGRMPADAGEIEWGPTVKLGYFAQEYREFEPQTKVIDVIKAVAEVIPTSDGGVLT 420 Query: 420 AGQMLERFLFPPAMQWTPIAKLSGGEKRRLYLLRVLMGAPNVLLLDEPTNDLDIGTLAVL 479 A QMLERFLF PA QWTP+ KLSGGEKRRLYLL+VLM +PNVLLLDEPTNDLDI TL++L Sbjct: 421 ASQMLERFLFTPAQQWTPVEKLSGGEKRRLYLLQVLMSSPNVLLLDEPTNDLDIQTLSIL 480 Query: 480 EDYLDEFPGVVFTVSHDRFFLDRTVDKLIAFE-NGSIRLHVGNYSEYEEWMANNI----P 534 EDYL++FPGVV TVSHDRFFLDR VD+++AFE G I +GNY++Y E +A I Sbjct: 481 EDYLEDFPGVVITVSHDRFFLDRVVDQILAFEGQGKIHSAIGNYTDYREQLARRIAEEQS 540 Query: 535 ARGGDTPKEAGTGKNSSAPEQGQTVPAAPPAREKLKFTFKEQREYEGIDEAIEQAEQHLA 594 +R + + G+NS E A P +K ++KEQREYE I++ I E L Sbjct: 541 SREALSKTQKLNGQNSRLGEAEAAGHQAKPKERPVKMSYKEQREYEQIEDRIAGLEGQLE 600 Query: 595 DISAQMEAAFADSGKLQELVEKQRQGEAELERLMERWTYLNELAEKIAGK 644 + M A ++ GKL EL++ + E +LE +ERWTYL+ELAE+IAG+ Sbjct: 601 QVDQDMAEAGSNYGKLNELMKAKEDLEKQLEESLERWTYLSELAEEIAGR 650 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.316 0.134 0.376 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 3,740,396,362 Number of extensions: 160977547 Number of successful extensions: 1108476 Number of sequences better than 1.0e-05: 46584 Number of HSP's gapped: 1052847 Number of HSP's successfully gapped: 63748 Length of query: 645 Length of database: 3,060,696,203 Length adjustment: 142 Effective length of query: 503 Effective length of database: 1,722,912,073 Effective search space: 866624772719 Effective search space used: 866624772719 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 135 (56.6 bits)