BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0462.0004.p (207 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KLB4.1 B3KLB4_9BACI Fumarylacetoacetate (FAA) hydrolase 294 3e-78 Q24RW0.1 Q24RW0_DESHY Putative uncharacterized protein 227 5e-58 B8FRA4.1 B8FRA4_DESHD Fumarylacetoacetate (FAA) hydrolase 227 5e-58 B1DAP3.1 B1DAP3_9BACL Fumarylacetoacetate (FAA) hydrolase 224 2e-57 Q9KDZ0.1 Q9KDZ0_BACHD BH1071 protein 222 1e-56 >B3KLB4.1 B3KLB4_9BACI Fumarylacetoacetate (FAA) hydrolase Length = 207 Score = 294 bits (752), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 135/207 (65%), Positives = 166/207 (80%) Query: 1 MGADVNNIYCVGRNYRQHAEELGNKVPSEPLVFLKPSHAAVPLDKAIIQLPKDAGLIHYE 60 M A VNN+YCVGRNY+ HA ELGN VP EP++FLKPSHA VPLD ++++LP D G +H+E Sbjct: 1 MCALVNNVYCVGRNYQLHAAELGNAVPEEPMIFLKPSHAVVPLDGSVLKLPMDRGSLHFE 60 Query: 61 GEIVLRIARDYVPGMSVQELVDVMALGLDFTLRDIHNDLQKKGLPWTPAKGFKNAAPLTP 120 GE+V+++A DY PG +V ELV MALG+DFTLRD+ +++KG PWT AK FK++APLTP Sbjct: 61 GELVIQLAEDYAPGKTVDELVKTMALGIDFTLRDVQTVIKEKGHPWTAAKAFKSSAPLTP 120 Query: 121 YIAFPETEELEATDYTVRKNGVEVQRGNVKNMIFSLQKIVDFIAARYGLGKDDLIFTGTP 180 IAFP T +LE D+TV KNG +VQRGNVK+MIFSLQ+I+D+I YGLG+ DLIFTGTP Sbjct: 121 SIAFPGTAKLEDKDFTVWKNGAQVQRGNVKDMIFSLQRIIDYIGEHYGLGQGDLIFTGTP 180 Query: 181 AGVGPVASGDSFELFWGETLLGTCLIG 207 AGVGP SGD FELFWG+ LG C IG Sbjct: 181 AGVGPTESGDVFELFWGDVRLGRCEIG 207 >Q24RW0.1 Q24RW0_DESHY Putative uncharacterized protein Length = 214 Score = 227 bits (578), Expect = 5e-58, Method: Compositional matrix adjust. Identities = 103/203 (50%), Positives = 142/203 (69%) Query: 5 VNNIYCVGRNYRQHAEELGNKVPSEPLVFLKPSHAAVPLDKAIIQLPKDAGLIHYEGEIV 64 + NIYCVGRNY QHA+EL N VP+ P +F+KP+HA V I +PKD G +HYE E+V Sbjct: 11 IKNIYCVGRNYLQHAKELNNAVPTSPFLFVKPTHALVEGQGQTIAMPKDQGNVHYEAELV 70 Query: 65 LRIARDYVPGMSVQELVDVMALGLDFTLRDIHNDLQKKGLPWTPAKGFKNAAPLTPYIAF 124 + + ++Y PGM + ++D +A+G+DFTLR++ ++L+KKGLPW AKGF N+A L+ ++ F Sbjct: 71 VHVGKNYEPGMKAEAVIDKIAVGIDFTLREVQDELKKKGLPWLLAKGFPNSAVLSRWLPF 130 Query: 125 PETEELEATDYTVRKNGVEVQRGNVKNMIFSLQKIVDFIAARYGLGKDDLIFTGTPAGVG 184 E D+T+ KNG EVQRGN+K MIF + I++F A +GL + D+IFTGTPAGVG Sbjct: 131 EGLEGTAGHDFTLEKNGQEVQRGNIKEMIFDIPTIIEFCAQHFGLAEGDIIFTGTPAGVG 190 Query: 185 PVASGDSFELFWGETLLGTCLIG 207 A+GD F L W E +G IG Sbjct: 191 VAAAGDHFVLKWKEEQVGELFIG 213 >B8FRA4.1 B8FRA4_DESHD Fumarylacetoacetate (FAA) hydrolase Length = 205 Score = 227 bits (578), Expect = 5e-58, Method: Compositional matrix adjust. Identities = 103/203 (50%), Positives = 142/203 (69%) Query: 5 VNNIYCVGRNYRQHAEELGNKVPSEPLVFLKPSHAAVPLDKAIIQLPKDAGLIHYEGEIV 64 + NIYCVGRNY QHA+EL N VP+ P +F+KP+HA V I +PKD G +HYE E+V Sbjct: 2 IKNIYCVGRNYLQHAKELNNAVPTSPFLFVKPTHALVEGQGQTIAMPKDQGNVHYEAELV 61 Query: 65 LRIARDYVPGMSVQELVDVMALGLDFTLRDIHNDLQKKGLPWTPAKGFKNAAPLTPYIAF 124 + + ++Y PGM + ++D +A+G+DFTLR++ ++L+KKGLPW AKGF N+A L+ ++ F Sbjct: 62 VHVGKNYEPGMKAEAVIDKIAVGIDFTLREVQDELKKKGLPWLLAKGFPNSAVLSRWLPF 121 Query: 125 PETEELEATDYTVRKNGVEVQRGNVKNMIFSLQKIVDFIAARYGLGKDDLIFTGTPAGVG 184 E D+T+ KNG EVQRGN+K MIF + I++F A +GL + D+IFTGTPAGVG Sbjct: 122 EGLEGTAGHDFTLEKNGQEVQRGNIKEMIFDIPTIIEFCAQHFGLAEGDIIFTGTPAGVG 181 Query: 185 PVASGDSFELFWGETLLGTCLIG 207 A+GD F L W E +G IG Sbjct: 182 VAAAGDHFVLKWKEEQVGELFIG 204 >B1DAP3.1 B1DAP3_9BACL Fumarylacetoacetate (FAA) hydrolase Length = 209 Score = 224 bits (572), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 104/206 (50%), Positives = 144/206 (69%) Query: 1 MGADVNNIYCVGRNYRQHAEELGNKVPSEPLVFLKPSHAAVPLDKAIIQLPKDAGLIHYE 60 M ++ NIYC+GRNYR HA ELGN+VP EPLVF KPSHA P++ ++++P G +H+E Sbjct: 1 MANEIRNIYCIGRNYRLHALELGNEVPEEPLVFTKPSHAVAPMNGNVVEIPGGRGEVHFE 60 Query: 61 GEIVLRIARDYVPGMSVQELVDVMALGLDFTLRDIHNDLQKKGLPWTPAKGFKNAAPLTP 120 E+VLRIAR PGMS E++D +ALGLD TLRD+ + L+ KG PW AKGFK +APL Sbjct: 61 LELVLRIARPLEPGMSPDEIIDGLALGLDLTLRDVQSKLKAKGQPWLDAKGFKASAPLGE 120 Query: 121 YIAFPETEELEATDYTVRKNGVEVQRGNVKNMIFSLQKIVDFIAARYGLGKDDLIFTGTP 180 ++A+P E L+A D+ + +NG + Q GN K+M+FS+ ++V I +RYGLG+ D+IFTGTP Sbjct: 121 WMAYPGEEGLKAFDFALIRNGEQAQLGNSKDMLFSISELVRHIDSRYGLGEGDIIFTGTP 180 Query: 181 AGVGPVASGDSFELFWGETLLGTCLI 206 AGV + GD E + +C + Sbjct: 181 AGVAALHDGDVLEALFNGEKAASCTV 206 >Q9KDZ0.1 Q9KDZ0_BACHD BH1071 protein Length = 206 Score = 222 bits (566), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 99/194 (51%), Positives = 142/194 (73%) Query: 4 DVNNIYCVGRNYRQHAEELGNKVPSEPLVFLKPSHAAVPLDKAIIQLPKDAGLIHYEGEI 63 D+ NIYC+GRNY HA ELGN +P +P++F KP+H+ + +++ P + G IH+E EI Sbjct: 2 DIRNIYCIGRNYADHARELGNAIPDKPILFSKPTHSLTIANGQMLEFPSNRGEIHHELEI 61 Query: 64 VLRIARDYVPGMSVQELVDVMALGLDFTLRDIHNDLQKKGLPWTPAKGFKNAAPLTPYIA 123 VL I + Y G+S++ELVDVMALG+DFTLRD N+L+KKG PW AKGFK+AA +T + + Sbjct: 62 VLHIGKPYEKGISLEELVDVMALGIDFTLRDEQNELKKKGHPWLRAKGFKHAAVVTDFWS 121 Query: 124 FPETEELEATDYTVRKNGVEVQRGNVKNMIFSLQKIVDFIAARYGLGKDDLIFTGTPAGV 183 FP E +ATD+++ + VQ+GN++ M+FS +++V+ + +GLG+ DL+FTGTP GV Sbjct: 122 FPGEETCKATDFSLLIHDQVVQKGNIQQMLFSFEQMVEEVGEAFGLGEGDLLFTGTPEGV 181 Query: 184 GPVASGDSFELFWG 197 GP+ SGD LFWG Sbjct: 182 GPIQSGDQLSLFWG 195 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.320 0.140 0.422 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,326,788,608 Number of extensions: 57530244 Number of successful extensions: 122772 Number of sequences better than 1.0e-05: 2217 Number of HSP's gapped: 119273 Number of HSP's successfully gapped: 2217 Length of query: 207 Length of database: 3,060,696,203 Length adjustment: 129 Effective length of query: 78 Effective length of database: 1,845,385,268 Effective search space: 143940050904 Effective search space used: 143940050904 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 128 (53.9 bits)