BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0462.0002.p (159 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C0ZG22.1 C0ZG22_BREBN Putative uncharacterized protein 151 2e-35 B3KLB2.1 B3KLB2_9BACI Putative uncharacterized protein 149 6e-35 B1DL23.1 B1DL23_9BACL Putative uncharacterized protein 137 4e-31 B0G7N2.1 B0G7N2_9FIRM Putative uncharacterized protein 92 1e-17 C0FE96.1 C0FE96_9CLOT Putative uncharacterized protein 92 1e-17 >C0ZG22.1 C0ZG22_BREBN Putative uncharacterized protein Length = 389 Score = 151 bits (382), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 71/126 (56%), Positives = 86/126 (68%), Gaps = 1/126 (0%) Query: 29 HWGKERMEQYDSVQQSLGHSFIDAGADLVIGGHPHVLQGIEPYKGKWIAYSTGNFIFTRS 88 HWGKER + Q+ L ++IDAGADL++GGHPHVLQG E Y KWIAYS GNFIFTR+ Sbjct: 254 HWGKERSDYPVDHQKELSRAYIDAGADLIVGGHPHVLQGFERYNDKWIAYSLGNFIFTRA 313 Query: 89 QTRATWDTAVFQAECSVEGQCSMKLKPMNAELAQPVPMNEVDGQLLLHKVESLSSGLVKI 148 TW+T V QA CS G C + + P +AEL Q VPMNE +G LL ++ES+S V I Sbjct: 314 NEPKTWETMVLQANCSKSGDCELTMLPFHAELGQAVPMNESNGAALLKRIESISEQ-VDI 372 Query: 149 GSDGNV 154 SDG V Sbjct: 373 QSDGRV 378 >B3KLB2.1 B3KLB2_9BACI Putative uncharacterized protein Length = 439 Score = 149 bits (377), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 69/127 (54%), Positives = 88/127 (69%) Query: 29 HWGKERMEQYDSVQQSLGHSFIDAGADLVIGGHPHVLQGIEPYKGKWIAYSTGNFIFTRS 88 HWG+E + + Q +L +FID GADL+IGGHPHVLQG+E YKGKWIAYSTGNFIFT+S Sbjct: 307 HWGEELHKTPNVHQINLSRAFIDGGADLIIGGHPHVLQGLEQYKGKWIAYSTGNFIFTKS 366 Query: 89 QTRATWDTAVFQAECSVEGQCSMKLKPMNAELAQPVPMNEVDGQLLLHKVESLSSGLVKI 148 TW TAVF+A CS +G C +KL P E+ Q +P+ + + LL +V+ S G VKI Sbjct: 367 SNADTWKTAVFRASCSKQGDCDLKLTPYRTEIGQVIPLEGKEAEALLKEVQERSVGGVKI 426 Query: 149 GSDGNVV 155 DG V+ Sbjct: 427 ALDGEVI 433 >B1DL23.1 B1DL23_9BACL Putative uncharacterized protein Length = 450 Score = 137 bits (344), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 69/155 (44%), Positives = 85/155 (54%), Gaps = 1/155 (0%) Query: 1 VASVYDSAEXXXXXXXXXXXXXXXXXXXHWGKERMEQYDSVQQSLGHSFIDAGADLVIGG 60 VA YD+ HWG E+ E + Q+ +ID+GADLV+G Sbjct: 295 VAETYDTTRTKAAIKKAKEKADLVVVMVHWGIEKAETPEQYQRDFAREYIDSGADLVVGS 354 Query: 61 HPHVLQGIEPYKGKWIAYSTGNFIFTRSQTRATWDTAVFQAECSVEGQCSMKLKPMNAEL 120 HPHVLQG E YKGKWIAYS GNFIF+ AT DT V A CS G C +K PMN L Sbjct: 355 HPHVLQGFEQYKGKWIAYSLGNFIFSAYPKGATADTGVLNAVCSKSGDCDLKFDPMNNNL 414 Query: 121 AQPVPMNEVDGQLLLHKVESLSSGLVKIGSDGNVV 155 AQP P++ + LL + +LS G VK+ SDG + Sbjct: 415 AQPKPVDGDKAKTLLDHLTALSFG-VKVRSDGTIA 448 >B0G7N2.1 B0G7N2_9FIRM Putative uncharacterized protein Length = 417 Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 49/130 (37%), Positives = 69/130 (53%), Gaps = 14/130 (10%) Query: 29 HWGKERMEQYDSVQQSLGHSFIDAGADLVIGGHPHVLQGIEPYKGKWIAYSTGNFIFTRS 88 HWG E+ + ++ Q+ L H ID GADLVIG HPHVL+GIE Y GK+IAYS GNF F + Sbjct: 289 HWGIEKEYKPNATQKKLAHLAIDEGADLVIGHHPHVLEGIEKYNGKYIAYSLGNFCFGGN 348 Query: 89 QTRATWDTAVFQAECSVEGQ-------------CSMKLKPMNAELAQPVPMNEVDGQLLL 135 + + DT +FQ +++ CS+ N P P+ + + + Sbjct: 349 KNPSDKDTMIFQQTFTIDTDGKVADDDNINIIPCSLS-SSSNKNDYCPTPLEGDEAERVR 407 Query: 136 HKVESLSSGL 145 K+E S GL Sbjct: 408 QKIEKYSEGL 417 >C0FE96.1 C0FE96_9CLOT Putative uncharacterized protein Length = 416 Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 53/130 (40%), Positives = 73/130 (56%), Gaps = 6/130 (4%) Query: 29 HWGKERMEQYDSVQQSLGHSFIDAGADLVIGGHPHVLQGIEPYKGKWIAYSTGNFIFTRS 88 HWG E+ + +S Q++LG +IDAGADLVIG HPHVLQGIE YKGK I YS GNFIF S Sbjct: 289 HWGIEKSTKPESYQRTLGQQYIDAGADLVIGSHPHVLQGIEYYKGKPIVYSLGNFIFGSS 348 Query: 89 QTRATWDTAVFQAECSVEGQCSMKLKPMNAELAQPVPM-NEVDGQLLLHKVESLSSGLVK 147 + T + EG+ S+ + P + + +E + Q +E +S + Sbjct: 349 IPK----TMLLSVTVPPEGEPSLSMLPGTSSAGYTRTLTDEGERQAFYQYMEEISFD-IA 403 Query: 148 IGSDGNVVQV 157 + DG V+Q Sbjct: 404 VDKDGTVIQT 413 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.315 0.131 0.392 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 787,264,131 Number of extensions: 28078941 Number of successful extensions: 70666 Number of sequences better than 1.0e-05: 263 Number of HSP's gapped: 70725 Number of HSP's successfully gapped: 263 Length of query: 159 Length of database: 3,060,696,203 Length adjustment: 120 Effective length of query: 39 Effective length of database: 1,930,174,403 Effective search space: 75276801717 Effective search space used: 75276801717 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 125 (52.8 bits)