BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0459.0027.p (198 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C0Z9Y9.1 C0Z9Y9_BREBN Putative tellurium resistance protein 239 1e-61 A8MM93.1 A8MM93_ALKOO Stress protein 229 1e-58 Q2B1Y8.1 Q2B1Y8_9BACI YceC 218 2e-55 Q97J72.1 Q97J72_CLOAB TerE family protein, ortholog of stress re... 216 1e-54 A4J1D2.1 A4J1D2_DESRM Stress protein 208 2e-52 >C0Z9Y9.1 C0Z9Y9_BREBN Putative tellurium resistance protein Length = 201 Score = 239 bits (610), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 121/200 (60%), Positives = 146/200 (73%), Gaps = 3/200 (1%) Query: 1 LAGINLVKGQKIDLTKGNAGLSNVIVGLGWDPAEPARGFFGVKK---QANIDCDASALLL 57 ++ I+L KGQKIDLTKGNAGLS V+VGLGWDP + + G G QANIDCDAS ++L Sbjct: 1 MSVISLQKGQKIDLTKGNAGLSKVLVGLGWDPVKKSGGLLGGLFGGGQANIDCDASVIML 60 Query: 58 SENGKLTNKLNLVCFHNKQNANSSVVHSGDNLTGEGDGDDEQIKVNLKAIPADVHKVLVV 117 +ENGK T + NLV F NK++ SV HSGDNLTGEG+GDDEQI V L +P+DVHK++ V Sbjct: 61 NENGKFTKETNLVYFGNKRSGCGSVNHSGDNLTGEGEGDDEQISVELSRVPSDVHKLIFV 120 Query: 118 VNIYDAVNRKQDFGMIKSAYIRIVNASGNSELVKFNLTDNYTGFTALICGELYRHGEEWK 177 VNIYD V+R+QDFGMI +AYIRI+N S EL KFNLT+NY+G T+LI GELYRH EWK Sbjct: 121 VNIYDCVSRRQDFGMIGNAYIRIMNPSSRQELCKFNLTENYSGKTSLIVGELYRHSGEWK 180 Query: 178 FXXXXXXXXXXXXNQLAERY 197 F +QL RY Sbjct: 181 FAAIGEGTTDTSISQLVRRY 200 >A8MM93.1 A8MM93_ALKOO Stress protein Length = 201 Score = 229 bits (583), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 112/199 (56%), Positives = 146/199 (73%), Gaps = 5/199 (2%) Query: 4 INLVKGQKIDLTKGNAGLSNVIVGLGWDPAEPARGFFGVK-----KQANIDCDASALLLS 58 I+L KGQ++DLTKGNAGLS +++GLGWDP E +G K ANIDCDAS L+LS Sbjct: 3 ISLQKGQRVDLTKGNAGLSKLMIGLGWDPVEQKKGGLFGGLLGGAKAANIDCDASVLMLS 62 Query: 59 ENGKLTNKLNLVCFHNKQNANSSVVHSGDNLTGEGDGDDEQIKVNLKAIPADVHKVLVVV 118 E KL NK NL+ F N +++ SVVH+GDNLTG+GDGDDEQI V+L IPA++HK+L V Sbjct: 63 ETDKLMNKSNLIYFGNLRSSCGSVVHTGDNLTGDGDGDDEQIIVDLGRIPANIHKLLFFV 122 Query: 119 NIYDAVNRKQDFGMIKSAYIRIVNASGNSELVKFNLTDNYTGFTALICGELYRHGEEWKF 178 NIYDAVNR+QDFGMI++A+IR+VN S N E++++NL++NY G TAL+ E+YRHG EWKF Sbjct: 123 NIYDAVNRRQDFGMIQNAFIRVVNGSNNQEMLRYNLSENYAGKTALMVAEIYRHGGEWKF 182 Query: 179 XXXXXXXXXXXXNQLAERY 197 ++ +RY Sbjct: 183 GAIGEGTHDGSLGEVIKRY 201 >Q2B1Y8.1 Q2B1Y8_9BACI YceC Length = 203 Score = 218 bits (556), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 106/181 (58%), Positives = 135/181 (74%), Gaps = 6/181 (3%) Query: 4 INLVKGQKIDLTKGNAGLSNVIVGLGWDPAEP------ARGFFGVKKQANIDCDASALLL 57 INL KGQ++DLTKGN GLS ++VGLGWDP E FG AN+DCDAS ++L Sbjct: 3 INLQKGQRVDLTKGNPGLSKIMVGLGWDPVESKGGGGLLGSLFGGGGGANVDCDASVIML 62 Query: 58 SENGKLTNKLNLVCFHNKQNANSSVVHSGDNLTGEGDGDDEQIKVNLKAIPADVHKVLVV 117 EN KL N +++ F N ++++ SV H+GDNLTGEGDGDDEQI V+L +P+ V K++ V Sbjct: 63 GENDKLRNNSDVIYFGNLKSSDGSVQHTGDNLTGEGDGDDEQINVDLSRVPSHVQKLVFV 122 Query: 118 VNIYDAVNRKQDFGMIKSAYIRIVNASGNSELVKFNLTDNYTGFTALICGELYRHGEEWK 177 VNIYDAV RKQ FGMI++AYIRIVN G EL+ +NLTD+Y+G T+L+ GELYRHG +WK Sbjct: 123 VNIYDAVKRKQHFGMIRNAYIRIVNPMGREELIHYNLTDDYSGKTSLVVGELYRHGTDWK 182 Query: 178 F 178 F Sbjct: 183 F 183 >Q97J72.1 Q97J72_CLOAB TerE family protein, ortholog of stress responce protein SCP2 (YCEC) B.subtilis Length = 201 Score = 216 bits (549), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 110/200 (55%), Positives = 144/200 (72%), Gaps = 8/200 (4%) Query: 4 INLVKGQKIDLTKGNAGLSNVIVGLGWDPAEPAR--GF----FGVKKQANIDCDASALLL 57 INL KGQ+I+LTKG LS + VGLGWDP +R GF FGVK Q+ IDCDAS L+L Sbjct: 3 INLQKGQRINLTKGGQTLSKLTVGLGWDPISKSRKSGFLSSIFGVK-QSEIDCDASVLML 61 Query: 58 SENGKLTNKLNLVCFHNKQNANSSVVHSGDNLTGEGDGDDEQIKVNLKAIPADVHKVLVV 117 +E+ KL N N+V F N ++ SV+H+GDNLTGEG+GDDE I V L +P+++HK++ Sbjct: 62 NEDYKLENN-NVVYFGNLRSRCESVIHTGDNLTGEGNGDDEVIYVTLDKVPSNIHKLVFA 120 Query: 118 VNIYDAVNRKQDFGMIKSAYIRIVNASGNSELVKFNLTDNYTGFTALICGELYRHGEEWK 177 VNIYD +NR+QDFGMIK+AYIR+VN+S N ELV++NLTD+Y+G T +I GE+YR+G EWK Sbjct: 121 VNIYDCINRRQDFGMIKNAYIRVVNSSNNEELVRYNLTDDYSGKTTVIVGEIYRNGSEWK 180 Query: 178 FXXXXXXXXXXXXNQLAERY 197 F N ++ RY Sbjct: 181 FAAIGEGTNDTNLNLISRRY 200 >A4J1D2.1 A4J1D2_DESRM Stress protein Length = 200 Score = 208 bits (529), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 107/199 (53%), Positives = 134/199 (67%), Gaps = 4/199 (2%) Query: 4 INLVKGQKIDLTKGNAGLSNVIVGLGWDPAEPARGFFGVKK----QANIDCDASALLLSE 59 INL KGQKIDLTK N LS ++VGLGWDP + G F NIDCDAS LL+ Sbjct: 2 INLQKGQKIDLTKTNPNLSKIMVGLGWDPVKSGGGGFLGGLFGGGSPNIDCDASVYLLNA 61 Query: 60 NGKLTNKLNLVCFHNKQNANSSVVHSGDNLTGEGDGDDEQIKVNLKAIPADVHKVLVVVN 119 NGKL NLV F NK + +SV H+GDN+TG+GDGDDEQI ++L +PADVH+++ VVN Sbjct: 62 NGKLAKDKNLVYFGNKTSPCASVRHAGDNVTGQGDGDDEQIFIDLTQVPADVHRLVFVVN 121 Query: 120 IYDAVNRKQDFGMIKSAYIRIVNASGNSELVKFNLTDNYTGFTALICGELYRHGEEWKFX 179 IYD V RKQ FGMI++A+IR+VN++ EL KFNL++ Y G T+LI GE+YRH EWKF Sbjct: 122 IYDCVARKQHFGMIQNAFIRVVNSANGQELCKFNLSEGYEGKTSLITGEVYRHNGEWKFA 181 Query: 180 XXXXXXXXXXXNQLAERYI 198 L +RY+ Sbjct: 182 AIGEATTDPGLKSLTQRYL 200 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.317 0.136 0.398 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,115,753,446 Number of extensions: 43987344 Number of successful extensions: 101255 Number of sequences better than 1.0e-05: 761 Number of HSP's gapped: 100209 Number of HSP's successfully gapped: 762 Length of query: 198 Length of database: 3,060,696,203 Length adjustment: 129 Effective length of query: 69 Effective length of database: 1,845,385,268 Effective search space: 127331583492 Effective search space used: 127331583492 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 127 (53.5 bits)