BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0459.0022.p (402 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C3BRV7.1 C3BRV7_9BACI Putative uncharacterized protein 432 e-119 C3B9R5.1 C3B9R5_BACMY Putative uncharacterized protein 432 e-119 C3ASF8.1 C3ASF8_BACMY Putative uncharacterized protein 432 e-119 C2WDU8.1 C2WDU8_BACCE Putative uncharacterized protein 432 e-119 C0Z9Y5.1 C0Z9Y5_BREBN Putative uncharacterized protein 418 e-115 >C3BRV7.1 C3BRV7_9BACI Putative uncharacterized protein Length = 404 Score = 432 bits (1112), Expect = e-119, Method: Compositional matrix adjust. Identities = 202/402 (50%), Positives = 281/402 (69%), Gaps = 4/402 (0%) Query: 1 LRYFDYLTKEQEMSLFYSPPVSFNPATDKELLAYAVGAALYMPATRPSVAEDILKLKSSG 60 +++F YL+ E++ LFY P++F+ KE LAYA+GA LY P T+ ++A DI K G Sbjct: 1 MKHFSYLSSEEKKKLFYQEPITFSKDITKEQLAYALGATLYTPGTKDTIAVDIAAKKHEG 60 Query: 61 LVTVIMDLEDAIGDGEVDFAEESIVRHLAFLSAYADNEPDLRNSLPLLFVRVRNPEQLQQ 120 ++++ LED+I DG+V AE+++V + L+ D L + +PLLF+R+R P+Q++ Sbjct: 61 ATSIVLCLEDSISDGDVKLAEQNVVIQMQLLAHMIDANRLLPSDVPLLFIRIREPKQMRS 120 Query: 121 LIFRLGTLITMLTGFVFPKFTLENGVEYFESIADYNSSRSYSAPVLYGMPILESAPVIYR 180 LI LG+ + ++GFVFPKFT NG+ Y + D N + S S LYGMPILES +IY+ Sbjct: 121 LIHELGSAVHCMSGFVFPKFTPANGMSYIHELQDINETYSLS---LYGMPILESPEIIYK 177 Query: 181 ESRLDTLLGIRDLLNEYREYVLNVRIGATDFSSLFGLRRSPDISIYDLTPIRDCISDIIN 240 E+R+DTLL I+ +L+ YR ++LNVRIGATDFS +FG+RR+ D +IYD+ IRDCISDIIN Sbjct: 178 ETRIDTLLAIKAILDSYRAFILNVRIGATDFSGIFGIRRNKDTTIYDIAVIRDCISDIIN 237 Query: 241 VFGRVDEGYVISGPVWEYFANKGHRVLRPQLRQTPFEDTYGKQGREIRNHYITSAMDGLF 300 +F R + YVISGPVWEYF N+ RVL+PQLRQTPF ++G G +R + DGL Sbjct: 238 IFSRKADEYVISGPVWEYFGNR-QRVLKPQLRQTPFRKSFGSAGVTMREEMLHRYEDGLI 296 Query: 301 REVLLDKENGIVGKTIIHPSHLRPVQAMYTVMHEEYVDALSIVGSNDGSRGVFKSEYYNK 360 EVLLD+ NG++GKT+IHPSH++ VQA++ V E+Y+DA ++ + GV KS + NK Sbjct: 297 HEVLLDQANGLIGKTVIHPSHIKLVQALHVVTLEDYLDAKAVFEAAQTYNGVMKSSFSNK 356 Query: 361 MNEIKPHLNWAKRVLLRSQIYGVLHEQQHFVGLLPENEYTHV 402 MNE+KPH NWA++ LL+S IYGVLHEQQ F LL E +V Sbjct: 357 MNEVKPHYNWARKTLLKSNIYGVLHEQQTFFDLLTEKSKQNV 398 >C3B9R5.1 C3B9R5_BACMY Putative uncharacterized protein Length = 404 Score = 432 bits (1112), Expect = e-119, Method: Compositional matrix adjust. Identities = 202/402 (50%), Positives = 281/402 (69%), Gaps = 4/402 (0%) Query: 1 LRYFDYLTKEQEMSLFYSPPVSFNPATDKELLAYAVGAALYMPATRPSVAEDILKLKSSG 60 +++F YL+ E++ LFY P++F+ KE LAYA+GA LY P T+ ++A DI K G Sbjct: 1 MKHFSYLSSEEKKKLFYQEPITFSKDITKEQLAYALGATLYTPGTKDTIAVDIAAKKHEG 60 Query: 61 LVTVIMDLEDAIGDGEVDFAEESIVRHLAFLSAYADNEPDLRNSLPLLFVRVRNPEQLQQ 120 ++++ LED+I DG+V AE+++V + L+ D L + +PLLF+R+R P+Q++ Sbjct: 61 ATSIVLCLEDSISDGDVKLAEQNVVIQMQLLAHMIDANRLLPSDVPLLFIRIREPKQMRS 120 Query: 121 LIFRLGTLITMLTGFVFPKFTLENGVEYFESIADYNSSRSYSAPVLYGMPILESAPVIYR 180 LI LG+ + ++GFVFPKFT NG+ Y + D N + S S LYGMPILES +IY+ Sbjct: 121 LIHELGSAVHCMSGFVFPKFTPANGMSYIHELQDINETYSLS---LYGMPILESPEIIYK 177 Query: 181 ESRLDTLLGIRDLLNEYREYVLNVRIGATDFSSLFGLRRSPDISIYDLTPIRDCISDIIN 240 E+R+DTLL I+ +L+ YR ++LNVRIGATDFS +FG+RR+ D +IYD+ IRDCISDIIN Sbjct: 178 ETRIDTLLAIKAILDSYRAFILNVRIGATDFSGIFGIRRNKDTTIYDIAVIRDCISDIIN 237 Query: 241 VFGRVDEGYVISGPVWEYFANKGHRVLRPQLRQTPFEDTYGKQGREIRNHYITSAMDGLF 300 +F R + YVISGPVWEYF N+ RVL+PQLRQTPF ++G G +R + DGL Sbjct: 238 IFSRKADEYVISGPVWEYFGNR-QRVLKPQLRQTPFRKSFGSAGVTMREEMLHRYEDGLI 296 Query: 301 REVLLDKENGIVGKTIIHPSHLRPVQAMYTVMHEEYVDALSIVGSNDGSRGVFKSEYYNK 360 EVLLD+ NG++GKT+IHPSH++ VQA++ V E+Y+DA ++ + GV KS + NK Sbjct: 297 HEVLLDQANGLIGKTVIHPSHIKLVQALHVVTLEDYLDAKAVFEAAQTYNGVMKSSFSNK 356 Query: 361 MNEIKPHLNWAKRVLLRSQIYGVLHEQQHFVGLLPENEYTHV 402 MNE+KPH NWA++ LL+S IYGVLHEQQ F LL E +V Sbjct: 357 MNEVKPHYNWARKTLLKSNIYGVLHEQQTFFDLLTEKSKQNV 398 >C3ASF8.1 C3ASF8_BACMY Putative uncharacterized protein Length = 404 Score = 432 bits (1112), Expect = e-119, Method: Compositional matrix adjust. Identities = 202/402 (50%), Positives = 281/402 (69%), Gaps = 4/402 (0%) Query: 1 LRYFDYLTKEQEMSLFYSPPVSFNPATDKELLAYAVGAALYMPATRPSVAEDILKLKSSG 60 +++F YL+ E++ LFY P++F+ KE LAYA+GA LY P T+ ++A DI K G Sbjct: 1 MKHFSYLSSEEKKKLFYQEPITFSKDITKEQLAYALGATLYTPGTKDTIAVDIAAKKHEG 60 Query: 61 LVTVIMDLEDAIGDGEVDFAEESIVRHLAFLSAYADNEPDLRNSLPLLFVRVRNPEQLQQ 120 ++++ LED+I DG+V AE+++V + L+ D L + +PLLF+R+R P+Q++ Sbjct: 61 ATSIVLCLEDSISDGDVKLAEQNVVIQMQLLAHMIDANRLLPSDVPLLFIRIREPKQMRS 120 Query: 121 LIFRLGTLITMLTGFVFPKFTLENGVEYFESIADYNSSRSYSAPVLYGMPILESAPVIYR 180 LI LG+ + ++GFVFPKFT NG+ Y + D N + S S LYGMPILES +IY+ Sbjct: 121 LIHELGSAVHCMSGFVFPKFTPANGMSYIHELQDINETYSLS---LYGMPILESPEIIYK 177 Query: 181 ESRLDTLLGIRDLLNEYREYVLNVRIGATDFSSLFGLRRSPDISIYDLTPIRDCISDIIN 240 E+R+DTLL I+ +L+ YR ++LNVRIGATDFS +FG+RR+ D +IYD+ IRDCISDIIN Sbjct: 178 ETRIDTLLAIKAILDSYRAFILNVRIGATDFSGIFGIRRNKDTTIYDIAVIRDCISDIIN 237 Query: 241 VFGRVDEGYVISGPVWEYFANKGHRVLRPQLRQTPFEDTYGKQGREIRNHYITSAMDGLF 300 +F R + YVISGPVWEYF N+ RVL+PQLRQTPF ++G G +R + DGL Sbjct: 238 IFSRKADEYVISGPVWEYFGNR-QRVLKPQLRQTPFRKSFGSAGVTMREEMLHRYEDGLI 296 Query: 301 REVLLDKENGIVGKTIIHPSHLRPVQAMYTVMHEEYVDALSIVGSNDGSRGVFKSEYYNK 360 EVLLD+ NG++GKT+IHPSH++ VQA++ V E+Y+DA ++ + GV KS + NK Sbjct: 297 HEVLLDQANGLIGKTVIHPSHIKLVQALHVVTLEDYLDAKAVFEAAQTYNGVMKSSFSNK 356 Query: 361 MNEIKPHLNWAKRVLLRSQIYGVLHEQQHFVGLLPENEYTHV 402 MNE+KPH NWA++ LL+S IYGVLHEQQ F LL E +V Sbjct: 357 MNEVKPHYNWARKTLLKSNIYGVLHEQQTFFDLLTEKSKQNV 398 >C2WDU8.1 C2WDU8_BACCE Putative uncharacterized protein Length = 402 Score = 432 bits (1110), Expect = e-119, Method: Compositional matrix adjust. Identities = 203/403 (50%), Positives = 291/403 (72%), Gaps = 6/403 (1%) Query: 1 LRYFDYLTKEQEMSLFYSPPVSFNPATDKELLAYAVGAALYMPATRPSVAEDILKLKSSG 60 +++F YL+ E++ +LFY P++F+ K+ LAYA+GA LY P T+ ++A+DI++ K G Sbjct: 1 MQHFSYLSLEEKRNLFYQEPITFSKDISKDQLAYALGATLYTPGTKRTIADDIVRKKHEG 60 Query: 61 LVTVIMDLEDAIGDGEVDFAEESIVRHLAFLSAYADNEPDLRNS-LPLLFVRVRNPEQLQ 119 + ++++ LED+I DGE + AE+++V + L AY N L S +PLLF+R+R P+Q++ Sbjct: 61 ITSIVLCLEDSISDGEEELAEQNVVIQIQLL-AYMMNAGKLHPSNMPLLFIRIREPKQMR 119 Query: 120 QLIFRLGTLITMLTGFVFPKFTLENGVEYFESIADYNSSRSYSAPVLYGMPILESAPVIY 179 L+ LG + ++GFVFPKFT NG+ Y ++D N + S S LYGMPILES +IY Sbjct: 120 SLVRELGNAVHCISGFVFPKFTPANGMSYIHELSDINEAYSLS---LYGMPILESPEIIY 176 Query: 180 RESRLDTLLGIRDLLNEYREYVLNVRIGATDFSSLFGLRRSPDISIYDLTPIRDCISDII 239 +ESR+++LL I+ +L+ YR+++LNVRIGATDFS +FG+RR+ D +IYD++ IRDCISDII Sbjct: 177 KESRIESLLSIKAILDSYRDFILNVRIGATDFSGIFGIRRNKDTTIYDISVIRDCISDII 236 Query: 240 NVFGRVDEGYVISGPVWEYFANKGHRVLRPQLRQTPFEDTYGKQGREIRNHYITSAMDGL 299 N+F R + Y+ISGPVWEYF +K RVL+PQLRQTPF ++ G G +R + DGL Sbjct: 237 NIFSRKADEYIISGPVWEYFESK-QRVLKPQLRQTPFHESLGNAGLTMREEMLHRYEDGL 295 Query: 300 FREVLLDKENGIVGKTIIHPSHLRPVQAMYTVMHEEYVDALSIVGSNDGSRGVFKSEYYN 359 EVLLD+ NG++GKT+IHPSH++ +QAM+TV E+Y+DA SI + GV KS + N Sbjct: 296 IHEVLLDQSNGLIGKTVIHPSHIKLIQAMHTVTLEDYLDAKSIFENAHAYNGVMKSSFSN 355 Query: 360 KMNEIKPHLNWAKRVLLRSQIYGVLHEQQHFVGLLPENEYTHV 402 KMNE+KPH NWA++ LL+S IYGVLHEQ+ F+ LL E H+ Sbjct: 356 KMNEVKPHYNWARKTLLKSNIYGVLHEQKTFIDLLTEKTTEHM 398 >C0Z9Y5.1 C0Z9Y5_BREBN Putative uncharacterized protein Length = 401 Score = 418 bits (1075), Expect = e-115, Method: Compositional matrix adjust. Identities = 205/395 (51%), Positives = 281/395 (71%), Gaps = 7/395 (1%) Query: 1 LRYFDYLTKEQEMSLFYSPPVSFNPATDKELLAYAVGAALYMPATRPSVAEDILKLKSSG 60 +R+FDYL + ++ LF P+ N T+KE+LA+A+GA LYMPA R +++ D++ K G Sbjct: 1 MRHFDYLLENEKEELFSVHPLPINRNTEKEVLAHALGATLYMPAIRTTISHDVMTQKHEG 60 Query: 61 LVTVIMDLEDAIGDGEVDFAEESIVRHLAFLSAYADNEPDLRNSLPLLFVRVRNPEQLQQ 120 LV++++ LEDAIGD EV AE+S++R + +S+ N ++ +P++FVRVR+ Q+ + Sbjct: 61 LVSMVICLEDAIGDHEVTEAEQSLIRQVRDISSRLRNGLIQQDDIPIMFVRVRDVHQMNR 120 Query: 121 LIFRLGTLITMLTGFVFPKFTLENGVEYFESIADYNSSRSYSAPVLYGMPILESAPVIYR 180 L+ L + LTGFVFPKFT N EY E++ N R PV YGMPILESA +IYR Sbjct: 121 LVEELQEDLISLTGFVFPKFTSRNAEEYLEALQSCN--RYVPFPV-YGMPILESADIIYR 177 Query: 181 ESRLDTLLGIRDLLNEYREYVLNVRIGATDFSSLFGLRRSPDISIYDLTPIRDCISDIIN 240 ESR LL I+ +L++YR VLNVR+GATDFSSLFGLRR PD+SIY+++ IRDCI DI+N Sbjct: 178 ESRTAELLSIKKILDKYRHLVLNVRMGATDFSSLFGLRRGPDVSIYEISTIRDCIGDIVN 237 Query: 241 VFGRVDEGYVISGPVWEYFANKGHRVLRPQLRQTPFEDTY-GKQGREIRNHYITSAMDGL 299 +F R YV+SGPVWEYF+N G R+L+PQLRQ+PFE G GR +R + DGL Sbjct: 238 MFTRQGSEYVVSGPVWEYFSN-GERLLKPQLRQSPFEQKLGGASGRRLRQQLLNQWQDGL 296 Query: 300 FREVLLDKENGIVGKTIIHPSHLRPVQAMYTVMHEEYVDALSIVGSNDGSRGVFKSEYYN 359 +EVLLDKENG+ GKTIIHPSH++ V ++ + EEY DA +I+ S + GV KS Y N Sbjct: 297 IKEVLLDKENGLTGKTIIHPSHIKIVHSLAVITREEYEDARAILQSQ--TNGVTKSHYAN 354 Query: 360 KMNEIKPHLNWAKRVLLRSQIYGVLHEQQHFVGLL 394 KMNEIKPH +WAK+++++S++YGV HE +F+ LL Sbjct: 355 KMNEIKPHTSWAKKIMIKSKVYGVFHEHNNFINLL 389 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.321 0.140 0.407 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,453,581,958 Number of extensions: 104587529 Number of successful extensions: 236128 Number of sequences better than 1.0e-05: 126 Number of HSP's gapped: 235722 Number of HSP's successfully gapped: 171 Length of query: 402 Length of database: 3,060,696,203 Length adjustment: 138 Effective length of query: 264 Effective length of database: 1,760,596,133 Effective search space: 464797379112 Effective search space used: 464797379112 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 132 (55.5 bits)