BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0459.0018.p (357 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Q2BF09.1 Q2BF09_9BACI Putative uncharacterized protein 323 1e-86 C0Z9Z4.1 C0Z9Z4_BREBN Putative uncharacterized protein 306 2e-81 B5HSJ5.1 B5HSJ5_9ACTO Putative uncharacterized protein 187 1e-45 A1VWP6.1 A1VWP6_POLNA Putative uncharacterized protein 186 3e-45 Q82MB0.1 Q82MB0_STRAW Putative uncharacterized protein 179 2e-43 >Q2BF09.1 Q2BF09_9BACI Putative uncharacterized protein Length = 345 Score = 323 bits (829), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 165/341 (48%), Positives = 223/341 (65%), Gaps = 7/341 (2%) Query: 4 VNIYFNRWFSVAFHYMNLIRNNEDGIPVQIFATHPDIRHMSLQGADVAGTEPALEGIEYV 63 + I+FNRWF+ HY+ +I+NN D ++ THPD + LQ D GTEP + G EY+ Sbjct: 5 MKIWFNRWFTTVSHYITMIKNNPDNRSFTVYGTHPDKDALYLQVCDFKGTEPDISGEEYI 64 Query: 64 QFCVDFCRSNEIDIFIPHLHMLDIALHASMFDAIGTKVLVCRDLDLLEKIMDKGKFYESV 123 FC+DFC NEIDIFIP + I+ + F+AIG KVLVC D L+ + +K Y S+ Sbjct: 65 LFCLDFCARNEIDIFIPRKENVLISRNLPRFEAIGVKVLVCPDPMLMSFMDNKAAIYRSI 124 Query: 124 QETG-----IMTIPDYHVVSTAEQFQAAYEDLAARGHQVCFKPTETEGGLGFRIINNDRN 178 +E +++IPDY VV+TA F+ AY L A GH+VCFKP EG GFR++ + + Sbjct: 125 EEKNSAGKQLVSIPDYEVVNTAAGFKEAYHKLRAAGHKVCFKPVIGEGAYGFRVVKDRED 184 Query: 179 PLQDLFGH-VTPYISFEEARRILSSVDSFPNLMVMELLEGFEYSIDCLADENGRLLAAVP 237 + +LFG V ISF A ILS +SFP+LMV+E L+G EYSIDCLAD G+L ++P Sbjct: 185 SIAELFGQGVGHRISFANACGILSQQESFPDLMVLEYLDGPEYSIDCLAD-GGKLYTSIP 243 Query: 238 RRKAGGRLRLMEHIPELEDIASRVAGVYRIPFNYNIQMKYTGGVPKLLEINPRMSGGLHI 297 R+K GR+R +E L IA + Y +P+ +N+Q+KY GVPKLLEINPRMSGGLHI Sbjct: 244 RKKGHGRVRELEENLLLSGIAENLHREYPVPYVFNVQVKYGQGVPKLLEINPRMSGGLHI 303 Query: 298 SCLSGINFPYLAVKSALGGEVQPAEFTGNVLASHVEQPLIM 338 SCLSGINFPYLA+K L ++ PA + AS++E+ +I+ Sbjct: 304 SCLSGINFPYLAIKLLLNEKIDPAPPNFGIRASYLEKEVIL 344 >C0Z9Z4.1 C0Z9Z4_BREBN Putative uncharacterized protein Length = 340 Score = 306 bits (784), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 152/334 (45%), Positives = 219/334 (65%), Gaps = 2/334 (0%) Query: 1 MKKVNIYFNRWFSVAFHYMNLIRNNEDGIPVQIFATHPDIRHMSLQGADVAGTEPALEGI 60 M+K I+FNR F+ A+ + +IRNN D +I+ THP + LQ AD A EP L+ Sbjct: 1 MRK-RIWFNRTFATAYPIVEMIRNNPDNFTFEIYVTHPKRHSVMLQIADYAELEPTLDVP 59 Query: 61 EYVQFCVDFCRSNEIDIFIPHLHMLDIALHASMFDAIGTKVLVCRDLDLLEKIMDKGKFY 120 EY+ +C+ FC+ + ID+F+P+ +++I+ H F+ GT+V++ ++ LLE I DKGK + Sbjct: 60 EYIDYCLSFCKKHRIDVFLPNYRLVEISRHIKEFERQGTQVMIAQEHQLLEDISDKGKLF 119 Query: 121 ESVQETGIMTIPDYHVVSTAEQFQAAYEDLAARGHQVCFKPTETEGGLGFRIINNDRNPL 180 + Q+ + IP Y +V+TAEQFQ AYE L G++VCFKP EGG GF I+ +P+ Sbjct: 120 QLFQDVPEVPIPAYAIVNTAEQFQIAYEQLKQDGNKVCFKPARGEGGAGFYIVEEQLDPI 179 Query: 181 QDLFGHVTPYISFEEARRILSSVDSFPNLMVMELLEGFEYSIDCLADENGRLLAAVPRRK 240 LF I+ EE R LS+ ++F ++MVME L+ +EYSIDCLA E G+LLAAVPR+K Sbjct: 180 DRLFRSTHQQITIEEVVRTLSTRETFEDIMVMEYLDSYEYSIDCLAYE-GQLLAAVPRKK 238 Query: 241 AGGRLRLMEHIPELEDIASRVAGVYRIPFNYNIQMKYTGGVPKLLEINPRMSGGLHISCL 300 GR+R +E EL IA V ++ + +N+Q+KY G+PKLLEINPR SGG++ISC Sbjct: 239 VEGRIRELEDNDELLRIAEAVQQRLQLSYLFNVQIKYKEGIPKLLEINPRASGGMYISCR 298 Query: 301 SGINFPYLAVKSALGGEVQPAEFTGNVLASHVEQ 334 SG+NFPYLA+K L G+ ++L +HVE+ Sbjct: 299 SGVNFPYLALKLLLTGKADVPVPKLDILMTHVER 332 >B5HSJ5.1 B5HSJ5_9ACTO Putative uncharacterized protein Length = 377 Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 115/323 (35%), Positives = 169/323 (52%), Gaps = 7/323 (2%) Query: 2 KKVNIYFNRWFSVAFHYMNLIRNNEDGIPVQIFATHPDIRHMSLQGADVAGTEP-ALEGI 60 +V ++ NR ++ +M+ +R N V+I ATH D L AD A EP L Sbjct: 3 SRVRVWLNRTYAENVFFMDQLRRNPSDRAVEIHATHGDADSPVLAAADTAELEPEGLSPA 62 Query: 61 EYVQFCVDFCRSNEIDIFIPHLHMLDIALHASMFDAIGTKVLVCRDLDLLEKIMDKGKFY 120 YV+F +D C+ ID+F+P LH I H + F A+GT L+ + + DK Y Sbjct: 63 AYVEFALDQCQKRGIDVFVPRLHQAAIVAHRADFAALGT-ALLAPPPEAVAVFHDKVIAY 121 Query: 121 ESVQETGIMTIPDYHVVSTAEQFQAAYEDLAARGHQVCFKPTETEGGLGFRIINNDRNPL 180 E+V+ G+ +P + V TA++ AA E+L A GH+ CFKP GG+GFR+I L Sbjct: 122 EAVKAVGV-PVPPWWRVRTADELVAAVEELEADGHKACFKPASGAGGVGFRMITRAPFSL 180 Query: 181 QDLFGHVTPYISFEEARRILSSVDSFPNLMVMELLEGFEYSIDCLADENGRLLAAVPRRK 240 L G +PY+S + LS D + +VM LE E S+D L + R+ A+ R K Sbjct: 181 AQLNGFPSPYVSLDTVVEALSQADEPVDWLVMPRLEQPEVSVDTLTGPDNRVRLAIGRTK 240 Query: 241 AGGRLRLMEHIPELEDIASRVAGVYRIPFNYNIQMKYTGGVPKLLEINPRMSGGLHISCL 300 G R +H LE A +A + + + NIQ + G P L+++N R +GGLH L Sbjct: 241 NGRRRGFTQHEQWLEP-ARLIAEGFGLHYLSNIQFRMLGDRPVLMDVNTRPAGGLHQLSL 299 Query: 301 SGINFPYLAVKSALG---GEVQP 320 G+N P+ AV+ ALG G ++P Sbjct: 300 CGVNVPWAAVQLALGEDTGVIEP 322 >A1VWP6.1 A1VWP6_POLNA Putative uncharacterized protein Length = 339 Score = 186 bits (472), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 106/314 (33%), Positives = 178/314 (56%), Gaps = 10/314 (3%) Query: 1 MKKVNIYFNRWFSVAFHYMNLIRNNEDGIPVQIFATHPDIRHMSLQGADVAGTEPA-LEG 59 MK+V +FN+ FS + LIR ++ + + + + A + EP+ L+G Sbjct: 1 MKRV--WFNKTFSSVGSAIRLIREADEAADYHLVCSSTNPHAPAFLAAHESAVEPSGLKG 58 Query: 60 IEYVQFCVDFCRSNEIDIFIPHLHMLDIALHASMFDAIGTKVLVCRDLDLLEKIMDKGKF 119 Y+ +C++FC + I IFIP ++ F+A GT++L D+L + DK +F Sbjct: 59 QAYLDWCLEFCHEHGIGIFIPGKEASLLSAERQQFEAQGTRLLCAASQDMLHLLHDKAQF 118 Query: 120 YESVQETGIMTIPD-YHVVSTAEQFQAAYEDLAARGHQVCFKPTETEGGLGFRIINNDRN 178 Y+SV +T P + VV TA+QF+AAY L ++C KP+ + GLGF +++ R+ Sbjct: 119 YQSVN---CLTPPAAFRVVETAQQFEAAYRALRKEHAKLCIKPSVSVYGLGFSVLDEKRS 175 Query: 179 PLQDLFGHVTPYISFEEARRILSSVDSFPNLMVMELLEGFEYSIDCLADENGRLLAAVPR 238 Q L V +I ++ RR +++F ++VME L+G E+S+DC+ D NGRL+ A+PR Sbjct: 176 SAQLLLEGVQYHIGLDDLRRGFEVMETFRTMLVMEYLDGHEFSVDCIGD-NGRLVCAIPR 234 Query: 239 RKA--GGRLRLMEHIPELEDIASRVAGVYRIPFNYNIQMKYTGGVPKLLEINPRMSGGLH 296 +K G+ +L++ ++ + ++ Y + +N+Q + LLEINPRMSGG+ Sbjct: 235 KKPQLAGQGQLIDMREDILESTRQLTAAYGLNGVFNVQFREGQNGLGLLEINPRMSGGIA 294 Query: 297 ISCLSGINFPYLAV 310 ++CL+G N PYLA+ Sbjct: 295 MACLAGPNLPYLAL 308 >Q82MB0.1 Q82MB0_STRAW Putative uncharacterized protein Length = 381 Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 112/323 (34%), Positives = 165/323 (51%), Gaps = 7/323 (2%) Query: 2 KKVNIYFNRWFSVAFHYMNLIRNNEDGIPVQIFATHPDIRHMSLQGADVAGTEP-ALEGI 60 +V ++ NR ++ +M+ +R N V+I ATH D L AD + EP L Sbjct: 3 SRVRVWLNRTYAENVFFMDQLRRNPHDRAVEIHATHADADSPVLAAADTSAMEPEGLSPA 62 Query: 61 EYVQFCVDFCRSNEIDIFIPHLHMLDIALHASMFDAIGTKVLVCRDLDLLEKIMDKGKFY 120 YV++ +D C ID+F+P LH + H + F A GT L+ + + DK Y Sbjct: 63 GYVEYALDQCARRGIDVFVPRLHQDAVVAHRADFAAAGT-ALLAPPAEAVAVFQDKATAY 121 Query: 121 ESVQETGIMTIPDYHVVSTAEQFQAAYEDLAARGHQVCFKPTETEGGLGFRIINNDRNPL 180 E+VQ GI +P + V T ++ +A E+L A G++ CFKP GG+GFRII L Sbjct: 122 EAVQAIGI-PVPPWRRVRTEDELLSAVEELEAGGYKACFKPAAGAGGVGFRIITRTPFSL 180 Query: 181 QDLFGHVTPYISFEEARRILSSVDSFPNLMVMELLEGFEYSIDCLADENGRLLAAVPRRK 240 L G PY+ + + + D + +VM L E S+DCL + R+ AV R K Sbjct: 181 AHLNGFPGPYVQLDLVIQAVRDADEPVDWLVMPHLGQPEVSVDCLTGPDNRIRMAVGRTK 240 Query: 241 AGGRLRLMEHIPELEDIASRVAGVYRIPFNYNIQMKYTGGVPKLLEINPRMSGGLHISCL 300 G R H + D A+R+A + + + NIQ + G P L+++N R +GGLH L Sbjct: 241 NGRRRGFTLH-EQWIDPATRLAEGFGLHYLSNIQFRMFGDKPVLMDVNTRPAGGLHQLSL 299 Query: 301 SGINFPYLAVKSALG---GEVQP 320 G+N P+ AV+ ALG GEV P Sbjct: 300 CGLNAPWAAVQLALGEDPGEVAP 322 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.322 0.140 0.414 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,170,468,350 Number of extensions: 92607042 Number of successful extensions: 184472 Number of sequences better than 1.0e-05: 88 Number of HSP's gapped: 184325 Number of HSP's successfully gapped: 88 Length of query: 357 Length of database: 3,060,696,203 Length adjustment: 137 Effective length of query: 220 Effective length of database: 1,770,017,148 Effective search space: 389403772560 Effective search space used: 389403772560 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 132 (55.5 bits)