BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0459.0016.p (366 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C0ZDV6.1 C0ZDV6_BREBN Putative uncharacterized protein 248 8e-64 A8VY10.1 A8VY10_9BACI Membrane-flanked domain 194 1e-47 A7GPM7.1 A7GPM7_BACCN Toxic anion resistance family protein 176 3e-42 C3I0T7.1 C3I0T7_BACTU Tellurite resistance protein 173 3e-41 C3H119.1 C3H119_BACTU Tellurite resistance protein 173 3e-41 >C0ZDV6.1 C0ZDV6_BREBN Putative uncharacterized protein Length = 368 Score = 248 bits (632), Expect = 8e-64, Method: Compositional matrix adjust. Identities = 136/358 (37%), Positives = 218/358 (60%), Gaps = 7/358 (1%) Query: 1 MSTQLIEL-KKEDEQKVVEEASQLIEKVAKTDTVALDSLMDDIGKLGVKTQEKAGQTLKL 59 M+TQ I+L K+ED K+ EA ++ ++ + +DS+++ +G LG TQ A ++L++ Sbjct: 1 MTTQAIQLVKQEDIIKIQSEAENVVRQLQTDNQSQMDSILEQLGNLGESTQRNAAESLEI 60 Query: 60 LDRPVNDLMSGKRVEVPNMIMKLRNECETLQ-----QSKNVS-FFGKMLRKSPLKNYVYK 113 L RPV DLM GK ++PN ++KLR+ E L QS +S F ++L K+P+ Y+ K Sbjct: 61 LKRPVKDLMEGKNNDIPNTLLKLRSCTEELNPNKIFQSGGISNLFNRILGKNPISQYIRK 120 Query: 114 YQSVRTNIDAIVTGLRDGRDTLEESIVNMRQLKRTSMEEIYNLQTKIAFGNKLKELFEVE 173 Y+SVRT ID I+ L +G D L+E ++N++ +K+ S E IY L+ +I FGNKL E+ EVE Sbjct: 121 YESVRTQIDNIIASLLNGSDKLKEDVINLKYIKKKSGENIYELEKRIYFGNKLLEMLEVE 180 Query: 174 IAKPENEFRKAYLERGLRKVMVRIQSMTEMILLYNQAIAATXXXXXXXXXXXXSVNNAID 233 KPEN+ RK E+ + KV+ R+++M++MI + Q+IA+ +V NAI Sbjct: 181 SNKPENQLRKPEFEKAMVKVVTRVKNMSQMINILQQSIASVDVIADNNEKLDEAVFNAIT 240 Query: 234 KTSNLITVSAMIAMSLADQENVISAVEATNKTIEDQFKENAXXXXXXXXXXXXXXSKPSM 293 T N++TVSA I ++L +Q+ VI AV+ TN+ IED NA +PS+ Sbjct: 241 MTQNVVTVSAAIQLALNNQKKVIEAVQNTNQAIEDMLVANAQSLKQNTQEITSMLEQPSI 300 Query: 294 SLEAVNQAIGDLLSALDTSEQSNRRIIESCQDYTSKMTAINTQLNNRLGLNEASQPQA 351 ++ + QA D+ SA+ +E SNRRII+S +++ +M +N + +LG+ + +Q A Sbjct: 301 AINKLQQAFNDVYSAIQITEDSNRRIIDSSKNFIQEMDKLNADMRVKLGMADPNQLSA 358 >A8VY10.1 A8VY10_9BACI Membrane-flanked domain Length = 329 Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 109/309 (35%), Positives = 178/309 (57%), Gaps = 5/309 (1%) Query: 38 LMDDIGKLGVKTQEKAGQTLKLLDRPVNDLMSGKRVEVPNMIMKLRN-----ECETLQQS 92 L+ IG LG K QEKAG+TL+ L RPVND+M + ++P + KL+ E LQ+ Sbjct: 19 LLKSIGDLGTKEQEKAGETLESLKRPVNDMMKDQNNDLPEQLGKLKEVVSELEPNYLQEG 78 Query: 93 KNVSFFGKMLRKSPLKNYVYKYQSVRTNIDAIVTGLRDGRDTLEESIVNMRQLKRTSMEE 152 K F KMLRKSPL+ Y KY+++ + + I+ L G+D L+E V + QLK + E Sbjct: 79 KFKQFLNKMLRKSPLEKYAQKYETIDSEVQTIIEALLHGKDRLQEDTVMLYQLKDIAKER 138 Query: 153 IYNLQTKIAFGNKLKELFEVEIAKPENEFRKAYLERGLRKVMVRIQSMTEMILLYNQAIA 212 I L +I G +L + E E+ K E + A +++G +KV+ R+++M + +L+ Q++A Sbjct: 139 IGALNEQITTGKELHSMLEQELEKEEWQNDPAPIQKGQQKVLTRVKNMQQAVLVLQQSLA 198 Query: 213 ATXXXXXXXXXXXXSVNNAIDKTSNLITVSAMIAMSLADQENVISAVEATNKTIEDQFKE 272 + ++ NAI T N+ITV+A I +SL++Q VI AV+ NKT E+ Sbjct: 199 SVDIIVENNEKLEEAIFNAITMTKNIITVTASIQLSLSNQRKVIDAVQNVNKTTENMLLN 258 Query: 273 NAXXXXXXXXXXXXXXSKPSMSLEAVNQAIGDLLSALDTSEQSNRRIIESCQDYTSKMTA 332 NA +P++++E+ +A D+ +A++ +EQSN RIIES + + S+M Sbjct: 259 NAEMLKSNTEETLKTLEEPAIAMESFKKAYEDVYAAIELTEQSNSRIIESSKKFISEMDE 318 Query: 333 INTQLNNRL 341 +N +++ +L Sbjct: 319 LNKEMDQKL 327 >A7GPM7.1 A7GPM7_BACCN Toxic anion resistance family protein Length = 369 Score = 176 bits (446), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 106/337 (31%), Positives = 179/337 (53%), Gaps = 8/337 (2%) Query: 13 EQKVVE---EASQLIEKVAKTDTVALDSLMDDIGKLGVKTQEKAGQTLKLLDRPVNDLMS 69 E+++VE EA ++K+ L ++ +G LG K Q+ AGQTL L RPV +M+ Sbjct: 27 EEELVELNKEADLYVQKLNSEHNTDLSKVLSQLGDLGDKEQQAAGQTLSALKRPVTAMMN 86 Query: 70 GKRVEVPNMIMKLRN-----ECETLQQSKNVSFFGKMLRKSPLKNYVYKYQSVRTNIDAI 124 GK E+PN +++LR + +L+ S K+ +K+PL+ YVYKYQS+ I+ I Sbjct: 87 GKNEEIPNTLLELRKVVSELDPNSLKASGMKKLMFKVFKKNPLETYVYKYQSIDKQIEEI 146 Query: 125 VTGLRDGRDTLEESIVNMRQLKRTSMEEIYNLQTKIAFGNKLKELFEVEIAKPENEFRKA 184 + L GRD L+E V + LK S ++I+ L ++ G KL + E E PE + Sbjct: 147 IRSLLIGRDNLQEDTVGLEMLKEQSYDKIHALDKQVYLGKKLASMLEAEKQNPERQKDIP 206 Query: 185 YLERGLRKVMVRIQSMTEMILLYNQAIAATXXXXXXXXXXXXSVNNAIDKTSNLITVSAM 244 + L K++VR ++M + + Q+IA+ ++ NAI T N++TVSA Sbjct: 207 LINDALEKILVRTRNMQQAKSVLLQSIASVDIIKKNNEKLTEAIRNAITMTQNVVTVSAA 266 Query: 245 IAMSLADQENVISAVEATNKTIEDQFKENAXXXXXXXXXXXXXXSKPSMSLEAVNQAIGD 304 I ++L +Q I AV ATN+ IE N+ P++S+E + ++ + Sbjct: 267 IQLALTNQRKTIDAVNATNEAIESMVLSNSQALKQNTEETTQLLENPAISMEKLRESFQN 326 Query: 305 LLSALDTSEQSNRRIIESCQDYTSKMTAINTQLNNRL 341 + +A++ SE+S+ RIIES + + ++ N ++ +L Sbjct: 327 VFAAIEASEKSSERIIESSKKFVIELDTFNEEMKQKL 363 >C3I0T7.1 C3I0T7_BACTU Tellurite resistance protein Length = 387 Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 103/339 (30%), Positives = 181/339 (53%), Gaps = 5/339 (1%) Query: 8 LKKEDEQKVVEEASQLIEKVAKTDTVALDSLMDDIGKLGVKTQEKAGQTLKLLDRPVNDL 67 +K E+ +++ +EA ++K+ L ++ +G LG K Q+ AGQTL L RPV + Sbjct: 43 IKDEELEELNKEADLYVQKLNSEQNTDLSKVLSQLGNLGDKEQQAAGQTLSALKRPVTAM 102 Query: 68 MSGKRVEVPNMIMKLRN-----ECETLQQSKNVSFFGKMLRKSPLKNYVYKYQSVRTNID 122 M+GK E+PN +++LR + +L+ S K+ +K+PL+ YV+KYQS+ I+ Sbjct: 103 MNGKNEEIPNTLLELRKVVSELDPNSLKASGMKKIMFKVFKKNPLETYVHKYQSIDKQIE 162 Query: 123 AIVTGLRDGRDTLEESIVNMRQLKRTSMEEIYNLQTKIAFGNKLKELFEVEIAKPENEFR 182 I+ L GRD L+E V + LK S ++I+ L ++ G KL + E E PE + Sbjct: 163 EIIRSLLIGRDNLQEDTVGLEMLKEQSHDKIHALDKQVYLGKKLAGMLEAEKQNPERQRD 222 Query: 183 KAYLERGLRKVMVRIQSMTEMILLYNQAIAATXXXXXXXXXXXXSVNNAIDKTSNLITVS 242 + L K++VR ++M + + Q+IA+ ++ NAI T N++TVS Sbjct: 223 IPLINDALEKILVRTRNMQQAKSVLLQSIASVDIIKKNNEKLTEAIRNAITMTQNVVTVS 282 Query: 243 AMIAMSLADQENVISAVEATNKTIEDQFKENAXXXXXXXXXXXXXXSKPSMSLEAVNQAI 302 A I ++L +Q I AV ATN+ IE N+ P++S++ + ++ Sbjct: 283 AAIQLALTNQRKTIDAVNATNEAIESMVLSNSQALKQNTEETTKLLENPAISMDKLRESF 342 Query: 303 GDLLSALDTSEQSNRRIIESCQDYTSKMTAINTQLNNRL 341 ++ +A++ SE+S+ RIIES + + ++ N ++ +L Sbjct: 343 QNVFAAIEASEKSSERIIESSKKFVIELDTFNDEMKQKL 381 >C3H119.1 C3H119_BACTU Tellurite resistance protein Length = 387 Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 103/339 (30%), Positives = 181/339 (53%), Gaps = 5/339 (1%) Query: 8 LKKEDEQKVVEEASQLIEKVAKTDTVALDSLMDDIGKLGVKTQEKAGQTLKLLDRPVNDL 67 +K E+ +++ +EA ++K+ L ++ +G LG K Q+ AGQTL L RPV + Sbjct: 43 IKDEELEELNKEADLYVQKLNSEQNTDLSKVLSQLGDLGDKEQQAAGQTLSALKRPVTAM 102 Query: 68 MSGKRVEVPNMIMKLRN-----ECETLQQSKNVSFFGKMLRKSPLKNYVYKYQSVRTNID 122 M+GK E+PN +++LR + +L+ S K+ +K+PL+ YV+KYQS+ I+ Sbjct: 103 MNGKNEEIPNTLLELRKVVSELDPNSLKASGMKKIMFKVFKKNPLETYVHKYQSIDKQIE 162 Query: 123 AIVTGLRDGRDTLEESIVNMRQLKRTSMEEIYNLQTKIAFGNKLKELFEVEIAKPENEFR 182 I+ L GRD L+E V + LK S ++I+ L ++ G KL + E E PE + Sbjct: 163 EIIRSLLIGRDNLQEDTVGLEMLKEQSHDKIHALDKQVYLGKKLAGMLEAEKQNPERQRD 222 Query: 183 KAYLERGLRKVMVRIQSMTEMILLYNQAIAATXXXXXXXXXXXXSVNNAIDKTSNLITVS 242 + L K++VR ++M + + Q+IA+ ++ NAI T N++TVS Sbjct: 223 IPLINDALEKILVRTRNMQQAKSVLLQSIASVDIIKKNNEKLTEAIRNAITMTQNVVTVS 282 Query: 243 AMIAMSLADQENVISAVEATNKTIEDQFKENAXXXXXXXXXXXXXXSKPSMSLEAVNQAI 302 A I ++L +Q I AV ATN+ IE N+ P++S++ + ++ Sbjct: 283 AAIQLALTNQRKTIDAVNATNEAIESMVLSNSQALKQNTEETTKLLENPAISMDKLRESF 342 Query: 303 GDLLSALDTSEQSNRRIIESCQDYTSKMTAINTQLNNRL 341 ++ +A++ SE+S+ RIIES + + ++ N ++ +L Sbjct: 343 QNVFAAIEASEKSSERIIESSKKFVIELDTFNDEMKQKL 381 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.311 0.126 0.323 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,553,869,126 Number of extensions: 52843904 Number of successful extensions: 166421 Number of sequences better than 1.0e-05: 109 Number of HSP's gapped: 166349 Number of HSP's successfully gapped: 109 Length of query: 366 Length of database: 3,060,696,203 Length adjustment: 137 Effective length of query: 229 Effective length of database: 1,770,017,148 Effective search space: 405333926892 Effective search space used: 405333926892 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits) S2: 132 (55.5 bits)