BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0459.0013.p
         (82 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

C0EXK6.1 C0EXK6_9FIRM Putative uncharacterized protein                142   1e-32
C4IXR0.1 C4IXR0_CLOBO Putative transposase OrfA                       141   2e-32
C0EZ66.1 C0EZ66_9FIRM Putative uncharacterized protein                141   2e-32
C3KS57.1 C3KS57_CLOB6 Transposase                                     139   9e-32
B9MPX7.1 B9MPX7_ANATD Transposase IS200-family protein                139   9e-32

>C0EXK6.1 C0EXK6_9FIRM Putative uncharacterized protein
          Length = 137

 Score =  142 bits (357), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 62/81 (76%), Positives = 75/81 (92%)

Query: 2   IFESIQMNYNITLQEWNHDKDHVHILMKAHPNSDISKFLNAYKSASSRLIKKEFPIIRQQ 61
           IFE I  NYNITL+EWNHDKDH+HIL +AHP+++ISKF+NAYKSASSRL+KKEFP IRQ+
Sbjct: 39  IFEYIAPNYNITLEEWNHDKDHIHILFRAHPHTEISKFINAYKSASSRLLKKEFPQIRQK 98

Query: 62  LWKEYFWSRSYCLLTTGGGPI 82
           LWKE+FWS+S+CL+TTGG PI
Sbjct: 99  LWKEHFWSQSFCLITTGGAPI 119


>C4IXR0.1 C4IXR0_CLOBO Putative transposase OrfA
          Length = 135

 Score =  141 bits (356), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 63/81 (77%), Positives = 72/81 (88%)

Query: 2   IFESIQMNYNITLQEWNHDKDHVHILMKAHPNSDISKFLNAYKSASSRLIKKEFPIIRQQ 61
           IFE I  NYNI +++W HD +HVH+L KAHPNS++SKF+NAYKSASSRLIKKEFP IRQ+
Sbjct: 42  IFEKISPNYNIIIEKWEHDNNHVHVLFKAHPNSELSKFINAYKSASSRLIKKEFPQIRQK 101

Query: 62  LWKEYFWSRSYCLLTTGGGPI 82
           LWKEYFWSRSYCLLTTGG PI
Sbjct: 102 LWKEYFWSRSYCLLTTGGSPI 122


>C0EZ66.1 C0EZ66_9FIRM Putative uncharacterized protein
          Length = 137

 Score =  141 bits (355), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 62/81 (76%), Positives = 74/81 (91%)

Query: 2   IFESIQMNYNITLQEWNHDKDHVHILMKAHPNSDISKFLNAYKSASSRLIKKEFPIIRQQ 61
           IFE I  NYNITL+EWNHDKDH+HIL +AHPN++ISKF+NAYKSASSRL+KKEFP IRQ+
Sbjct: 39  IFEYIAPNYNITLEEWNHDKDHIHILFRAHPNTEISKFINAYKSASSRLLKKEFPQIRQK 98

Query: 62  LWKEYFWSRSYCLLTTGGGPI 82
           LWKE+FWS+S+CL+TTG  PI
Sbjct: 99  LWKEHFWSQSFCLITTGDAPI 119


>C3KS57.1 C3KS57_CLOB6 Transposase
          Length = 144

 Score =  139 bits (350), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 63/81 (77%), Positives = 70/81 (86%)

Query: 2   IFESIQMNYNITLQEWNHDKDHVHILMKAHPNSDISKFLNAYKSASSRLIKKEFPIIRQQ 61
           IF  I   YNI L EWNHDK+HVH+L  AHPNS++SKF+NAYKSASSRLIKKEFP IR+Q
Sbjct: 51  IFMYISPKYNIVLVEWNHDKNHVHVLFSAHPNSELSKFINAYKSASSRLIKKEFPQIRKQ 110

Query: 62  LWKEYFWSRSYCLLTTGGGPI 82
           LWKEYFWSRSYCLLT+GG PI
Sbjct: 111 LWKEYFWSRSYCLLTSGGAPI 131


>B9MPX7.1 B9MPX7_ANATD Transposase IS200-family protein
          Length = 135

 Score =  139 bits (350), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 61/81 (75%), Positives = 72/81 (88%)

Query: 2   IFESIQMNYNITLQEWNHDKDHVHILMKAHPNSDISKFLNAYKSASSRLIKKEFPIIRQQ 61
           IFE IQ NYNIT+ EWNHDKDH+H+L KA P + +SKF+NAYKSASSRLIKKEFP I+Q+
Sbjct: 39  IFEYIQPNYNITIVEWNHDKDHIHVLFKATPTTPLSKFINAYKSASSRLIKKEFPEIKQK 98

Query: 62  LWKEYFWSRSYCLLTTGGGPI 82
           LW+EYFWSRSYCLLT+GG P+
Sbjct: 99  LWQEYFWSRSYCLLTSGGAPV 119


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.322    0.135    0.432 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 510,481,669
Number of extensions: 15590656
Number of successful extensions: 41447
Number of sequences better than 1.0e-05: 254
Number of HSP's gapped: 41453
Number of HSP's successfully gapped: 254
Length of query: 82
Length of database: 3,060,696,203
Length adjustment: 52
Effective length of query: 30
Effective length of database: 2,570,803,423
Effective search space: 77124102690
Effective search space used: 77124102690
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 126 (53.1 bits)