BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0450.0027.p (429 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Q0W5E9.1 Q0W5E9_UNCMA Putative uncharacterized protein 357 1e-96 C0ZDT4.1 C0ZDT4_BREBN Putative uncharacterized protein 282 6e-74 C0CXX0.1 C0CXX0_9CLOT Putative uncharacterized protein 264 1e-68 C1I7B7.1 C1I7B7_9CLOT Putative uncharacterized protein 263 2e-68 A6PTM0.1 A6PTM0_9BACT Putative uncharacterized protein 242 6e-62 >Q0W5E9.1 Q0W5E9_UNCMA Putative uncharacterized protein Length = 406 Score = 357 bits (917), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 194/405 (47%), Positives = 245/405 (60%), Gaps = 10/405 (2%) Query: 17 LSKQQARLFLLQHQRLISGGLPPGKEAIYDFVRHVGCIQYDPLSIAGHNHELVLQARIPG 76 +++QQAR FLL HQ L G GK + ++R V CIQ+DPL++AG NHELVLQAR+ Sbjct: 6 ITRQQARSFLLAHQGLWPPGELEGKAGVSAYIRRVNCIQFDPLNVAGPNHELVLQARVKD 65 Query: 77 FVPELASELLYKDRLLIDGWDKNMSIYCTEDWPYFQRRRAMAAERYQGK-EALGAMVSHV 135 F + ELLY+DR LIDGWDKNM IY EDW YF+R R A +R GK + + + Sbjct: 66 FRSSMLQELLYRDRTLIDGWDKNMCIYPAEDWSYFRRARERARKRLGGKSHPITPYLDLI 125 Query: 136 REELTRRGPLSSLDLESTDKIDWAWAPARLSRAAMESMYYWGELSVHHRVHTRRYYDFSA 195 R E+ +GPL+S DL D+IDW W P R+SRAA+ESMY+WGEL VHH+V TRR YDF+ Sbjct: 126 RREIEEKGPLTSADLAFDDRIDWPWGPTRVSRAALESMYFWGELIVHHKVGTRRAYDFAR 185 Query: 196 KLLPGHLLDAEDPNVTPEQHFDWYVLRRIGSIGLQWNKSGDGWLGIAGLKSKERTAAIER 255 + L +L A D N T +Q++DWYV RRIGSIGL WN++GD WLGI +KSK+R AI R Sbjct: 186 RHLSDEILSAPDRNRTEKQYYDWYVHRRIGSIGLLWNRAGDAWLGIHDIKSKDRNDAIGR 245 Query: 256 LLLSGSLREVRVEGVKLPLYMRTADAPGLEEIXXXXXXXXXXXXXXXXXXXXXXXXXXXX 315 LL + EV VEG+ P Y+R D +E Sbjct: 246 LLRQEKIVEVWVEGISHPFYLRNEDMACMER--------ALRSRRSPQARASVLAPLDNL 297 Query: 316 XXXRELIWQLFGFTYRWEVYKPVAEREYGYYVLPLLYGDRFIARFEPVMDKKNGVLNILR 375 R+L+ +LFGF Y WEVYKP AER YGYYVLP+LYGDRF+ARFEP ++G L I Sbjct: 298 IWDRKLVKELFGFEYLWEVYKPAAERRYGYYVLPVLYGDRFVARFEPGRG-EDGALLIKN 356 Query: 376 WWWEPGTDVSAEMIPALTAALGSLAKCTRASSVKFAPGVAESNGL 420 WWWEP + S E+ L A ++ A V V+ L Sbjct: 357 WWWEPEIEQSEELRSGLLACFRQFSRYLGAGRVAADKKVSRREKL 401 >C0ZDT4.1 C0ZDT4_BREBN Putative uncharacterized protein Length = 396 Score = 282 bits (721), Expect = 6e-74, Method: Compositional matrix adjust. Identities = 152/390 (38%), Positives = 216/390 (55%), Gaps = 14/390 (3%) Query: 16 RLSKQQARLFLLQHQRLISGGLPPGKEAIYDFVRHVGCIQYDPLSIAGHNHELVLQARIP 75 +L+ +QAR FLL L+ GK+ + DFVR VGCIQ+DP+ + G N ELVLQ+RI Sbjct: 3 QLTNRQARQFLLMKHGLLGEYQFTGKQGVLDFVRQVGCIQFDPIDVCGKNAELVLQSRIK 62 Query: 76 GFVPELASELLYKDRLLIDGWDKNMSIYCTEDWPYFQRRRAMAAERYQGKEALGAMVSHV 135 GF + ELLY+DR LID DKN++I EDWPYF+R R A + + + + + V Sbjct: 63 GFTKNMLDELLYQDRFLIDYPDKNLAIIPIEDWPYFERYRQAARQHAKRYPEMEGLTAQV 122 Query: 136 REELTRRGPLSSLDLESTDKIDWA----WAPA-RLSRAAMESMYYWGELSVHHRVHTRRY 190 R + G LSS +L+ W W+ SR+ +E MY GEL +HH+ TR+Y Sbjct: 123 RTHIQNHGTLSSDELKLDGDFTWQSAIHWSSGNNTSRSVLEQMYSTGELIIHHKKGTRKY 182 Query: 191 YDFSAKLLPGHLLDAEDPNVTPEQHFDWYVLRRIGSIGLQWNKSGDGWLGIAGLKSKERT 250 YD + K +P +LL+A +P +H W VLRRIG++GL WN++ D WL I GLK+++R Sbjct: 183 YDIAEKYIPPNLLNAPEPLEDELEHHKWRVLRRIGAVGLLWNRASDAWLNIWGLKAEQRN 242 Query: 251 AAIERLLLSGSLREVRVEGVKLPLYMRTADAPGLEEIXXXXXXXXXXXXXXXXXXXXXXX 310 +LL + V VE +K LY RT D P +E + Sbjct: 243 EVFRQLLHEDRIVAVTVEQMKDTLYCRTEDLPLIEAV---------LQNPSPKLRCELIA 293 Query: 311 XXXXXXXXRELIWQLFGFTYRWEVYKPVAEREYGYYVLPLLYGDRFIARFEPVMDKKNGV 370 R+LI +LFGF Y WE+Y P +R++GYYVLPLLYG+ FI R E ++++K G Sbjct: 294 PLDNLIWDRKLINKLFGFDYTWEIYTPAIKRKFGYYVLPLLYGESFIGRAEVIVERKAGT 353 Query: 371 LNILRWWWEPGTDVSAEMIPALTAALGSLA 400 L + W+E + ++ AL + A Sbjct: 354 LVVKNIWYENDIKPTKQLRTALNNCFQNFA 383 >C0CXX0.1 C0CXX0_9CLOT Putative uncharacterized protein Length = 404 Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 152/408 (37%), Positives = 211/408 (51%), Gaps = 18/408 (4%) Query: 17 LSKQQARLFLLQHQRLISGGLPPGKEAIYDFVRHVGCIQYDPLSIAGHNHELVLQARIPG 76 L+ ++AR F+L Q L+ GK+ D+VR GCIQ+DP+ G N EL LQ+R+ G Sbjct: 4 LTIEEARNFILLKQGLLGEYRFTGKQGALDYVRQAGCIQFDPVDACGKNAELTLQSRVKG 63 Query: 77 FVPELASELLYKDRLLIDGWDKNMSIYCTEDWPYFQRRRAMAAERYQGKEALGAMVSHVR 136 F + ELLY+DR L+D DKN+SI EDWPYF+R R A E + + A+ Sbjct: 64 FTKQTLYELLYEDRSLVDYPDKNISIIPAEDWPYFERYRRAARENGRRFPGMAALEDQAL 123 Query: 137 EELTRRGPLSSLDLESTDKIDW--------AW-APARLSRAAMESMYYWGELSVHHRVHT 187 + GP+SS +L I W +W +RAA+E +Y GEL +HH+ Sbjct: 124 AYIRENGPVSSDELPIPGTIRWHSCIHWSGSWDGETNAARAALEQLYSTGELIIHHKKGA 183 Query: 188 RRYYDFSAKLLPGHLLDAEDPNVTPEQHFDWYVLRRIGSIGLQWNKSGDGWLGIAGLKSK 247 R+YYD + + LP LL+A DP E H W + RRIG++GL WN+ D WL GLK+ Sbjct: 184 RKYYDLAERHLPAALLNAPDPMPEDEAHLKWRIRRRIGAVGLLWNRPSDAWLNSWGLKTP 243 Query: 248 ERTAAIERLLLSGSLREVRVEGVKLPLYMRTADAPGLEEIXXXXXXXXXXXXXXXXXXXX 307 +R+ A E LL G + EV V+ +K LY R D P L+ + Sbjct: 244 QRSRAFEELLDGGEILEVSVDTIKHLLYCRAGDLPLLDRV---------RQGEAYKPRCE 294 Query: 308 XXXXXXXXXXXRELIWQLFGFTYRWEVYKPVAEREYGYYVLPLLYGDRFIARFEPVMDKK 367 R LI LFGF Y WE+Y P A+R+YG+YVLP+++G RF R E V + K Sbjct: 295 LIAPLDCMMWDRNLIRALFGFDYTWEIYTPAAKRKYGHYVLPMIWGSRFAGRVEAVSEAK 354 Query: 368 NGVLNILRWWWEPGTDVSAEMIPALTAALGSLAKCTRASSVKFAPGVA 415 G L + W+E G + ++ A+ L L K + V G A Sbjct: 355 TGRLIVKNIWYEEGVRRTKKLEIAVNGCLKRLGKLNQCREVVVLDGSA 402 >C1I7B7.1 C1I7B7_9CLOT Putative uncharacterized protein Length = 398 Score = 263 bits (672), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 142/400 (35%), Positives = 215/400 (53%), Gaps = 21/400 (5%) Query: 17 LSKQQARLFLLQHQRLISGGLPPGKEAIYDFVRHVGCIQYDPLSIAGHNHELVLQARIPG 76 +SK++ R FL+ +Q L + G+E I DF++ VGC+QYDPL++ G N +LV+Q+RI Sbjct: 1 MSKEELRKFLVVYQGLYTNNTFIGEEGIKDFIKRVGCVQYDPLNVVGRNADLVMQSRIED 60 Query: 77 FVPELASELLYKDRLLIDGWDKNMSIYCTEDWPYFQRRRAMAAERYQG----KEALGAM- 131 + P + +LLYK R LID WDK M+IY EDW YF+R R + +G + ++ A+ Sbjct: 61 YDPIMLEDLLYKKRELIDRWDKMMAIYSAEDWRYFRRVRLERKKEVEGVLRNRASINAIN 120 Query: 132 -VSHVREELTRRGPL--SSLDLESTDKIDWAWAPARLSRAAMESMYYWGELSVHHRVHTR 188 V V+E + + G S +DL +K W +LS A M+ M+ G L V + +T+ Sbjct: 121 YVDTVKEYIEKNGATSPSKIDLGFVEK--GKWGHGKLSSATMDYMWNMGVLGVKEKKNTQ 178 Query: 189 RYYDFSAKLLPGHLLDAEDPNVTPEQHFDWYVLRRIGSIGLQWNKSGDGWLGIAGLKSKE 248 + YD +LLP ++ DP ++ + WY RRIGSIG+ W+++G+GWLG Sbjct: 179 KIYDLIERLLPKEIISKVDPFKKDDEFYKWYFKRRIGSIGVYWDRNGEGWLGNYVYHKNL 238 Query: 249 RTAAIERLLLSGSLREVRVEGVKLPLYMRTADAPGLEEIXXXXXXXXXXXXXXXXXXXXX 308 R + L+ G L ++VE +K Y+R D L + Sbjct: 239 RIRILNELVEEGELIFIKVENLKENFYLRKEDISILND-----------SNRINENNIKI 287 Query: 309 XXXXXXXXXXRELIWQLFGFTYRWEVYKPVAEREYGYYVLPLLYGDRFIARFEPVMDKKN 368 R+L +F F Y WEVYKPV +R+YGYYVLP+LYGD+F+ARFEP + + N Sbjct: 288 LAPLDNIIWDRKLTRDIFNFDYTWEVYKPVDKRKYGYYVLPILYGDKFVARFEPELHRGN 347 Query: 369 GVLNILRWWWEPGTDVSAEMIPALTAALGSLAKCTRASSV 408 L I WWWE ++ + A+ +L + +A + Sbjct: 348 EPLVIKNWWWEDSYKITNNCVDAVKISLDKFCRYLKADGI 387 >A6PTM0.1 A6PTM0_9BACT Putative uncharacterized protein Length = 388 Score = 242 bits (617), Expect = 6e-62, Method: Compositional matrix adjust. Identities = 150/397 (37%), Positives = 198/397 (49%), Gaps = 13/397 (3%) Query: 12 VTTYRLSKQQARLFLLQHQRLISGGLPPGKEAIYDFVRHVGCIQYDPLSIAGHNHELVLQ 71 + Y +S++ A FL+ + L ++VR VGCIQ+DPL + G N ELVLQ Sbjct: 1 MAQYSISRRDACRFLIDYHHLSDETELKMPADTVEYVRKVGCIQFDPLDVVGRNPELVLQ 60 Query: 72 ARIPGFVPELASELLYKDRLLIDGWDKNMSIYCTEDWPYFQRRRAMAAERYQGKEALGAM 131 AR + ELLY++R L D WDKNM+I EDWP F R R A Q E Sbjct: 61 ARCRNYRKGDIGELLYRERRLFDVWDKNMAICAVEDWPCFSRFRNSHA---QWLEEHADA 117 Query: 132 VSHVREELTRRGPLSSLDLESTDKIDWAWAPARLSRAAMESMYYWGELSVHHRVHTRRYY 191 V V + L S D+E ++ ++SR +E M + G VHH+ RRYY Sbjct: 118 VRIVSDYLKTHEYACSSDIELEGRMPCWHRQQQMSRGVLECMCHAGLAVVHHKRGARRYY 177 Query: 192 DFSAKLLPGHLLDAEDPNVTPEQHFDWYVLRRIGSIGLQWNKSGDGWLGIAGLKSKERTA 251 + +P HLL+ + + +F W V RR G +GL WN+ GD WLGI G+KS R Sbjct: 178 SLAEHTIPRHLLERQVDHSDDAGYFLWQVRRRTGGVGLLWNRPGDAWLGIRGMKSVHRNE 237 Query: 252 AIERLLLSGSLREVRVEGVKLPLYMRTADAPGLEEIXXXXXXXXXXXXXXXXXXXXXXXX 311 A +L SG L EV VEG+K PLY+ P LE + Sbjct: 238 AFRKLAESGELLEVAVEGLKHPLYLPGPALPVLENV--------LRNAPAEAAECRMIAP 289 Query: 312 XXXXXXXRELIWQLFGFTYRWEVYKPVAEREYGYYVLPLLYGDRFIARFEPVMDKKNGVL 371 R+LI +LFGF+Y+WEVY P AER+YGYYVLP+L GDRFI R E + + VL Sbjct: 290 LDNLLWDRKLIAELFGFSYKWEVYTPAAERKYGYYVLPVLLGDRFIGRIE--LRSADAVL 347 Query: 372 NILRWWWEPGTDVSAEMIPALTAALGSLAKCTRASSV 408 + +W EP + PAL L A R +V Sbjct: 348 QVEHFWPEPDAGRVSGWKPALRRGLKRFAAYLRCRAV 384 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.321 0.138 0.434 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,455,751,670 Number of extensions: 98544423 Number of successful extensions: 220890 Number of sequences better than 1.0e-05: 277 Number of HSP's gapped: 220741 Number of HSP's successfully gapped: 367 Length of query: 429 Length of database: 3,060,696,203 Length adjustment: 139 Effective length of query: 290 Effective length of database: 1,751,175,118 Effective search space: 507840784220 Effective search space used: 507840784220 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 133 (55.8 bits)